CircRNA Information

General Information
circRNA Basic Information
CircID chr17:38916042|38916202
Strand +
CircType exon
Host Gene ENSG00000002834.16;
Algorism CIRI2;
Sequence CTTATGTTATACACCTATTTTCTTATTGTTTTCTTGTTTGTCCCCCTGACTGGAATGTAAGCCCCCAGAGGGCAGAGAGGTGGCTTTATATTCAGAGATGGACCCTACACATCCAGGACAGACCCATTGAGGAGGGAGGGACTGGCTGGGCTGCCTGGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:38916042|38916202 hsa-miR-181c-5p 0 0 1
chr17:38916042|38916202 hsa-miR-181c-3p 0 0 1
chr17:38916042|38916202 hsa-miR-340-5p 0 0 1
chr17:38916042|38916202 hsa-miR-340-3p 0 0 1
chr17:38916042|38916202 hsa-miR-326 0 1 1
chr17:38916042|38916202 hsa-miR-181d-5p 0 0 1
chr17:38916042|38916202 hsa-miR-181d-3p 0 0 1
chr17:38916042|38916202 hsa-miR-568 0 0 1
chr17:38916042|38916202 hsa-miR-570-5p 0 0 1
chr17:38916042|38916202 hsa-miR-570-3p 0 0 1
chr17:38916042|38916202 hsa-miR-575 0 0 1
chr17:38916042|38916202 hsa-miR-637 0 1 1
chr17:38916042|38916202 hsa-miR-1182 0 0 1
chr17:38916042|38916202 hsa-miR-145-5p 0 0 1
chr17:38916042|38916202 hsa-miR-142-5p 0 0 1
chr17:38916042|38916202 hsa-miR-193a-5p 0 0 1
chr17:38916042|38916202 hsa-miR-324-3p 0 0 1
chr17:38916042|38916202 hsa-miR-330-5p 0 1 1
chr17:38916042|38916202 hsa-miR-181a 0 0 1
chr17:38916042|38916202 hsa-miR-181b 0 0 1
chr17:38916042|38916202 hsa-miR-3921 1 0 0
chr17:38916042|38916202 hsa-miR-4469 0 1 0
chr17:38916042|38916202 hsa-miR-4673 0 1 0
chr17:38916042|38916202 hsa-miR-4734 1 0 0
chr17:38916042|38916202 hsa-miR-4741 1 0 0
chr17:38916042|38916202 hsa-miR-5685 0 1 0
chr17:38916042|38916202 hsa-miR-6849-3p 1 0 0
chr17:38916042|38916202 hsa-miR-6817-3p 0 1 0
chr17:38916042|38916202 hsa-miR-6732-5p 1 0 0
chr17:38916042|38916202 hsa-miR-6798-5p 1 1 0
chr17:38916042|38916202 hsa-miR-3667-3p 1 1 0
chr17:38916042|38916202 hsa-miR-7843-3p 0 1 0
chr17:38916042|38916202 hsa-miR-6769a-3p 0 1 0
chr17:38916042|38916202 hsa-miR-5010-5p 1 0 0
chr17:38916042|38916202 hsa-miR-6826-5p 1 1 0
chr17:38916042|38916202 hsa-miR-2114-5p 0 1 0
chr17:38916042|38916202 hsa-miR-2276-5p 0 1 0
chr17:38916042|38916202 hsa-miR-7151-5p 0 1 0
chr17:38916042|38916202 hsa-miR-518c-5p 1 0 0
chr17:38916042|38916202 hsa-miR-642a-5p 0 1 0
chr17:38916042|38916202 hsa-miR-6800-3p 0 1 0
chr17:38916042|38916202 hsa-miR-6803-5p 1 0 0
chr17:38916042|38916202 hsa-miR-328-5p 1 0 0
chr17:38916042|38916202 hsa-miR-4749-5p 1 0 0
chr17:38916042|38916202 hsa-miR-6794-5p 1 0 0
chr17:38916042|38916202 hsa-miR-6795-5p 1 1 0
chr17:38916042|38916202 hsa-miR-6887-5p 1 1 0
chr17:38916042|38916202 hsa-miR-6885-5p 1 0 0
chr17:38916042|38916202 hsa-miR-4665-5p 1 0 0
chr17:38916042|38916202 hsa-miR-4716-3p 1 1 0
chr17:38916042|38916202 hsa-miR-6753-3p 0 1 0
chr17:38916042|38916202 hsa-miR-4722-3p 1 0 0
chr17:38916042|38916202 hsa-miR-3059-5p 1 1 0
chr17:38916042|38916202 hsa-miR-4723-3p 0 1 0
chr17:38916042|38916202 hsa-miR-6769b-3p 0 1 0
chr17:38916042|38916202 hsa-miR-4690-3p 0 1 0
chr17:38916042|38916202 hsa-miR-4782-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:38916042|38916202
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MECKPPEGREVALYSEMDPTHPGQTH
Nucleotide Sequence CTGGAATGTAAGCCCCCAGAGGGCAGAGAGGTGGCTTTATATTCAGAGATGGACCCTACACATCCAGGACAGACCCATTGA

CircID chr17:38916042|38916202
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MNIKPPLCPLGAYIPVRGTNKKTIRK
Nucleotide Sequence CTGAATATAAAGCCACCTCTCTGCCCTCTGGGGGCTTACATTCCAGTCAGGGGGACAAACAAGAAAACAATAAGAAAATAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites