CircNet

General Information

circRNA Basic Information

CircID	chr17:39518463\|39518653
Strand	+
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CTGGGAGACGAAGGTTGTGGTGAGCCAAGATCGCGTCACTGCACTCCAACCTGGGTGACACACACAAAAATATGGCCAGTTCTATCCATCTATTAAAGTTAAAAAAAGTAAAATAAAATAACAGAGAGGGAAAAAAGTAAGAAGAAAACAAAACCAAAACATGGCCAGGCGTGGTAGCACGAGTGATCTTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:39518463\|39518653	hsa-miR-197-5p	0	0	1
chr17:39518463\|39518653	hsa-miR-197-3p	0	0	1
chr17:39518463\|39518653	hsa-miR-122-5p	0	0	1
chr17:39518463\|39518653	hsa-miR-122-3p	0	0	1
chr17:39518463\|39518653	hsa-miR-150-5p	0	0	1
chr17:39518463\|39518653	hsa-miR-150-3p	0	0	1
chr17:39518463\|39518653	hsa-miR-193b-5p	0	0	1
chr17:39518463\|39518653	hsa-miR-193b-3p	0	0	1
chr17:39518463\|39518653	hsa-miR-592	0	0	1
chr17:39518463\|39518653	hsa-miR-597-5p	0	0	1
chr17:39518463\|39518653	hsa-miR-597-3p	0	0	1
chr17:39518463\|39518653	hsa-miR-599	0	0	1
chr17:39518463\|39518653	hsa-miR-633	0	0	1
chr17:39518463\|39518653	hsa-miR-659-5p	0	0	1
chr17:39518463\|39518653	hsa-miR-659-3p	0	0	1
chr17:39518463\|39518653	hsa-miR-532-3p	0	0	1
chr17:39518463\|39518653	hsa-miR-193a-3p	0	0	1
chr17:39518463\|39518653	hsa-miR-220b	0	0	1
chr17:39518463\|39518653	hsa-miR-642	0	0	1
chr17:39518463\|39518653	hsa-miR-24	0	0	1
chr17:39518463\|39518653	hsa-miR-147	0	0	1
chr17:39518463\|39518653	hsa-miR-3132	1	0	0
chr17:39518463\|39518653	hsa-miR-3134	0	1	0
chr17:39518463\|39518653	hsa-miR-4284	0	1	0
chr17:39518463\|39518653	hsa-miR-4636	0	1	0
chr17:39518463\|39518653	hsa-miR-4662b	1	0	0
chr17:39518463\|39518653	hsa-miR-5190	0	1	0
chr17:39518463\|39518653	hsa-miR-5572	0	1	0
chr17:39518463\|39518653	hsa-miR-143-5p	1	1	0
chr17:39518463\|39518653	hsa-miR-504-3p	0	1	0
chr17:39518463\|39518653	hsa-miR-6861-5p	1	0	0
chr17:39518463\|39518653	hsa-miR-3677-5p	1	0	0
chr17:39518463\|39518653	hsa-miR-1229-5p	1	0	0
chr17:39518463\|39518653	hsa-miR-6849-5p	1	0	0
chr17:39518463\|39518653	hsa-miR-6511a-3p	0	1	0
chr17:39518463\|39518653	hsa-miR-6511b-3p	0	1	0
chr17:39518463\|39518653	hsa-miR-6769b-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:39518463\|39518653
ORF Type	ORF1
Protein Length	31
Nucleotide Length	96
Protein Sequence	LGDEGCGEPRSRHCTPTWVTHTKIWPVLSIY
Nucleotide Sequence	CTGGGAGACGAAGGTTGTGGTGAGCCAAGATCGCGTCACTGCACTCCAACCTGGGTGACACACACAAAAATATGGCCAGTTCTATCCATCTATTAA

CircID	chr17:39518463\|39518653
ORF Type	ORF2
Protein Length	25
Nucleotide Length	78
Protein Sequence	MHSNLGDTHKNMASSIHLLKLKKVK
Nucleotide Sequence	CTGCACTCCAACCTGGGTGACACACACAAAAATATGGCCAGTTCTATCCATCTATTAAAGTTAAAAAAAGTAAAATAA

CircID	chr17:39518463\|39518653
ORF Type	ORF3
Protein Length	52
Nucleotide Length	156
Protein Sequence	MVLFSSYFFPSLLFYFTFFNFNRWIELAIFLCVSPRLECSDAILAHHNLRLP
Nucleotide Sequence	TTGGTTTTGTTTTCTTCTTACTTTTTTCCCTCTCTGTTATTTTATTTTACTTTTTTTAACTTTAATAGATGGATAGAACTGGCCATATTTTTGTGTGTGTCACCCAGGTTGGAGTGCAGTGACGCGATCTTGGCTCACCACAACCTTCGTCTCCCA

CircID	chr17:39518463\|39518653
ORF Type	ORF4
Protein Length	28
Nucleotide Length	87
Protein Sequence	MAMFWFCFLLTFFPLCYFILLFLTLIDG
Nucleotide Sequence	CTGGCCATGTTTTGGTTTTGTTTTCTTCTTACTTTTTTCCCTCTCTGTTATTTTATTTTACTTTTTTTAACTTTAATAGATGGATAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information