CircRNA Information

General Information
circRNA Basic Information
CircID chr17:39636126|39636374
Strand -
CircType exon
Host Gene ENSG00000131771.12;
Algorism CIRI2;
Sequence AGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCTTCACAATTCTACTCCCCAGATCCTCTCCCCTGGACACAGGAGACCCACAGGGCAGGACCCTAAGATCTGGGGAAAGGAGGTCCTGAGAACCTTGAGGTACCCTTAGATCCTTTTCTACCCACTTTCCTATGGAGGATTCCAAGTCACCACTTCTCTCACCGGCTTCTACCAGGGTCCAGGACTAAGGCGTTTTTCTCCATAGC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:39636126|39636374 hsa-miR-198 0 0 1
chr17:39636126|39636374 hsa-miR-379-5p 0 0 1
chr17:39636126|39636374 hsa-miR-379-3p 0 0 1
chr17:39636126|39636374 hsa-miR-504-5p 0 0 1
chr17:39636126|39636374 hsa-miR-504-3p 0 0 1
chr17:39636126|39636374 hsa-miR-605-5p 0 0 1
chr17:39636126|39636374 hsa-miR-605-3p 0 0 1
chr17:39636126|39636374 hsa-miR-614 0 1 1
chr17:39636126|39636374 hsa-miR-637 0 0 1
chr17:39636126|39636374 hsa-miR-874-5p 0 0 1
chr17:39636126|39636374 hsa-miR-874-3p 0 0 1
chr17:39636126|39636374 hsa-miR-890 0 0 1
chr17:39636126|39636374 hsa-miR-939-5p 0 0 1
chr17:39636126|39636374 hsa-miR-939-3p 0 0 1
chr17:39636126|39636374 hsa-miR-1182 1 1 1
chr17:39636126|39636374 hsa-miR-1290 0 1 1
chr17:39636126|39636374 hsa-miR-1299 0 0 1
chr17:39636126|39636374 hsa-miR-1266-5p 0 0 1
chr17:39636126|39636374 hsa-miR-1266-3p 0 0 1
chr17:39636126|39636374 hsa-miR-299-3p 0 0 1
chr17:39636126|39636374 hsa-miR-193a-5p 0 0 1
chr17:39636126|39636374 hsa-miR-146b-3p 0 1 1
chr17:39636126|39636374 hsa-miR-339-5p 0 0 1
chr17:39636126|39636374 hsa-miR-876-5p 0 0 1
chr17:39636126|39636374 hsa-miR-1274a 0 0 1
chr17:39636126|39636374 hsa-miR-1274b 0 0 1
chr17:39636126|39636374 hsa-miR-219-2-3p 0 0 1
chr17:39636126|39636374 hsa-miR-516b 0 0 1
chr17:39636126|39636374 hsa-miR-298 1 0 0
chr17:39636126|39636374 hsa-miR-3132 1 1 0
chr17:39636126|39636374 hsa-miR-3165 1 0 0
chr17:39636126|39636374 hsa-miR-3175 1 0 0
chr17:39636126|39636374 hsa-miR-378c 1 0 0
chr17:39636126|39636374 hsa-miR-4312 1 0 0
chr17:39636126|39636374 hsa-miR-4522 1 0 0
chr17:39636126|39636374 hsa-miR-4540 0 1 0
chr17:39636126|39636374 hsa-miR-4710 1 0 0
chr17:39636126|39636374 hsa-miR-5739 0 1 0
chr17:39636126|39636374 hsa-miR-6745 0 1 0
chr17:39636126|39636374 hsa-miR-8085 0 1 0
chr17:39636126|39636374 hsa-miR-8089 1 1 0
chr17:39636126|39636374 hsa-miR-9500 0 1 0
chr17:39636126|39636374 hsa-miR-134-3p 0 1 0
chr17:39636126|39636374 hsa-miR-18a-3p 0 1 0
chr17:39636126|39636374 hsa-miR-4700-3p 0 1 0
chr17:39636126|39636374 hsa-miR-671-5p 1 0 0
chr17:39636126|39636374 hsa-miR-6833-5p 1 0 0
chr17:39636126|39636374 hsa-miR-7114-5p 0 1 0
chr17:39636126|39636374 hsa-miR-6089 1 0 0
chr17:39636126|39636374 hsa-miR-6746-5p 1 0 0
chr17:39636126|39636374 hsa-miR-6759-5p 0 1 0
chr17:39636126|39636374 hsa-miR-197-5p 1 1 0
chr17:39636126|39636374 hsa-miR-6748-5p 1 0 0
chr17:39636126|39636374 hsa-miR-6793-5p 1 0 0
chr17:39636126|39636374 hsa-miR-1229-5p 1 0 0
chr17:39636126|39636374 hsa-miR-7161-3p 0 1 0
chr17:39636126|39636374 hsa-miR-3677-3p 1 0 0
chr17:39636126|39636374 hsa-miR-6861-3p 0 1 0
chr17:39636126|39636374 hsa-miR-3690 1 1 0
chr17:39636126|39636374 hsa-miR-6864-5p 0 1 0
chr17:39636126|39636374 hsa-miR-6866-5p 1 0 0
chr17:39636126|39636374 hsa-miR-532-5p 0 1 0
chr17:39636126|39636374 hsa-miR-2355-5p 0 1 0
chr17:39636126|39636374 hsa-miR-875-5p 0 1 0
chr17:39636126|39636374 hsa-miR-219a-2-3p 0 1 0
chr17:39636126|39636374 hsa-miR-329-5p 0 1 0
chr17:39636126|39636374 hsa-miR-6769b-5p 1 0 0
chr17:39636126|39636374 hsa-miR-6763-5p 0 1 0
chr17:39636126|39636374 hsa-miR-6788-5p 1 1 0
chr17:39636126|39636374 hsa-miR-6856-5p 1 0 0
chr17:39636126|39636374 hsa-miR-7843-5p 1 0 0
chr17:39636126|39636374 hsa-miR-4700-5p 0 1 0
chr17:39636126|39636374 hsa-miR-4667-5p 0 1 0
chr17:39636126|39636374 hsa-miR-6724-5p 1 0 0
chr17:39636126|39636374 hsa-miR-6791-5p 1 0 0
chr17:39636126|39636374 hsa-miR-320a-3p 1 0 0
chr17:39636126|39636374 hsa-miR-320b 1 0 0
chr17:39636126|39636374 hsa-miR-320c 1 0 0
chr17:39636126|39636374 hsa-miR-320d 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:39636126|39636374
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MPFTILLPRSSPLDTGDPQGRTLRSGERRS
Nucleotide Sequence TTGCCCTTCACAATTCTACTCCCCAGATCCTCTCCCCTGGACACAGGAGACCCACAGGGCAGGACCCTAAGATCTGGGGAAAGGAGGTCCTGA
CircID chr17:39636126|39636374
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MGKGGPENLEVPLDPFLPTFLWRIPSHHFSHRLLPGSRTKAFFSI
Nucleotide Sequence CTGGGGAAAGGAGGTCCTGAGAACCTTGAGGTACCCTTAGATCCTTTTCTACCCACTTTCCTATGGAGGATTCCAAGTCACCACTTCTCTCACCGGCTTCTACCAGGGTCCAGGACTAAGGCGTTTTTCTCCATA
CircID chr17:39636126|39636374
ORF Type ORF3
Protein Length 47
Nucleotide Length 144
Protein Sequence MENPENREQGFALHNSTPQILSPGHRRPTGQDPKIWGKEVLRTLRYP
Nucleotide Sequence TTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCTTCACAATTCTACTCCCCAGATCCTCTCCCCTGGACACAGGAGACCCACAGGGCAGGACCCTAAGATCTGGGGAAAGGAGGTCCTGAGAACCTTGAGGTACCCTTAG
CircID chr17:39636126|39636374
ORF Type ORF4
Protein Length 72
Nucleotide Length 216
Protein Sequence MVEAGERSGDLESSIGKWVEKDLRVPQGSQDLLSPDLRVLPCGSPVSRGEDLGSRIVKGKSLFPVFWIFQCG
Nucleotide Sequence CTGGTAGAAGCCGGTGAGAGAAGTGGTGACTTGGAATCCTCCATAGGAAAGTGGGTAGAAAAGGATCTAAGGGTACCTCAAGGTTCTCAGGACCTCCTTTCCCCAGATCTTAGGGTCCTGCCCTGTGGGTCTCCTGTGTCCAGGGGAGAGGATCTGGGGAGTAGAATTGTGAAGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab