CircRNA Information

General Information
circRNA Basic Information
CircID chr17:39660232|39660515
Strand -
CircType exon
Host Gene ENSG00000131748.14;
Algorism CIRI2;
Sequence ACCATTGAAGTTCCCTTTCACGGCAAGACGTTTATCCTGAAGGTGAGTGAGGGGAGCGGGTGTCCTGGAGCCCCAGACAGCACAGGAGGCTCCAGGAAGGTGCCGAGGGGCCCTCTGGTGGGTGCCCCCCACCAAGAGGGAAGGGTTGGTCTGCCCGAGCCCATCTGGCACCACCCAGCCCTCTGCCGCCCTGTCCCAGACCTTCCTGCCCTGTCCTGCGGAGCTCGTGTACCAGGAGGTGATCCTGCAGCCCGAGAGGATGGTGCTGTGGAACAAGACAGTGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:39660232|39660515 hsa-miR-29a-5p 0 0 1
chr17:39660232|39660515 hsa-miR-29a-3p 0 0 1
chr17:39660232|39660515 hsa-miR-29c-5p 0 0 1
chr17:39660232|39660515 hsa-miR-29c-3p 0 0 1
chr17:39660232|39660515 hsa-miR-431-5p 0 0 1
chr17:39660232|39660515 hsa-miR-431-3p 0 0 1
chr17:39660232|39660515 hsa-miR-488-5p 0 0 1
chr17:39660232|39660515 hsa-miR-488-3p 0 0 1
chr17:39660232|39660515 hsa-miR-493-5p 0 0 1
chr17:39660232|39660515 hsa-miR-493-3p 0 0 1
chr17:39660232|39660515 hsa-miR-626 0 0 1
chr17:39660232|39660515 hsa-miR-637 0 0 1
chr17:39660232|39660515 hsa-miR-541-5p 0 0 1
chr17:39660232|39660515 hsa-miR-541-3p 0 0 1
chr17:39660232|39660515 hsa-miR-665 0 0 1
chr17:39660232|39660515 hsa-miR-1231 0 0 1
chr17:39660232|39660515 hsa-miR-1205 0 1 1
chr17:39660232|39660515 hsa-miR-1208 0 0 1
chr17:39660232|39660515 hsa-miR-1286 0 0 1
chr17:39660232|39660515 hsa-miR-1293 0 0 1
chr17:39660232|39660515 hsa-miR-1197 0 1 1
chr17:39660232|39660515 hsa-miR-296-5p 0 1 1
chr17:39660232|39660515 hsa-miR-767-5p 0 0 1
chr17:39660232|39660515 hsa-miR-654-5p 0 0 1
chr17:39660232|39660515 hsa-miR-1302 0 0 1
chr17:39660232|39660515 hsa-miR-642 0 0 1
chr17:39660232|39660515 hsa-miR-29b 0 0 1
chr17:39660232|39660515 hsa-miR-602 1 0 0
chr17:39660232|39660515 hsa-miR-608 0 1 0
chr17:39660232|39660515 hsa-miR-647 0 1 0
chr17:39660232|39660515 hsa-miR-762 1 1 0
chr17:39660232|39660515 hsa-miR-1248 0 1 0
chr17:39660232|39660515 hsa-miR-3141 0 1 0
chr17:39660232|39660515 hsa-miR-3196 1 1 0
chr17:39660232|39660515 hsa-miR-4298 1 1 0
chr17:39660232|39660515 hsa-miR-4254 0 1 0
chr17:39660232|39660515 hsa-miR-4270 1 0 0
chr17:39660232|39660515 hsa-miR-3615 0 1 0
chr17:39660232|39660515 hsa-miR-3909 0 1 0
chr17:39660232|39660515 hsa-miR-4436a 0 1 0
chr17:39660232|39660515 hsa-miR-4476 1 1 0
chr17:39660232|39660515 hsa-miR-4498 0 1 0
chr17:39660232|39660515 hsa-miR-3960 1 0 0
chr17:39660232|39660515 hsa-miR-4674 0 1 0
chr17:39660232|39660515 hsa-miR-4688 1 0 0
chr17:39660232|39660515 hsa-miR-4721 0 1 0
chr17:39660232|39660515 hsa-miR-4734 1 0 0
chr17:39660232|39660515 hsa-miR-4739 1 0 0
chr17:39660232|39660515 hsa-miR-4741 1 0 0
chr17:39660232|39660515 hsa-miR-5090 1 0 0
chr17:39660232|39660515 hsa-miR-150-3p 1 1 0
chr17:39660232|39660515 hsa-miR-4722-5p 1 1 0
chr17:39660232|39660515 hsa-miR-6820-5p 1 1 0
chr17:39660232|39660515 hsa-miR-6727-5p 1 0 0
chr17:39660232|39660515 hsa-miR-7845-5p 1 0 0
chr17:39660232|39660515 hsa-miR-2467-3p 1 0 0
chr17:39660232|39660515 hsa-miR-6810-5p 1 0 0
chr17:39660232|39660515 hsa-miR-6852-5p 0 1 0
chr17:39660232|39660515 hsa-miR-3944-3p 1 0 0
chr17:39660232|39660515 hsa-miR-1229-5p 1 0 0
chr17:39660232|39660515 hsa-miR-4640-5p 1 0 0
chr17:39660232|39660515 hsa-miR-1228-5p 1 0 0
chr17:39660232|39660515 hsa-miR-296-3p 1 1 0
chr17:39660232|39660515 hsa-miR-4743-5p 1 0 0
chr17:39660232|39660515 hsa-miR-4446-3p 0 1 0
chr17:39660232|39660515 hsa-miR-6824-5p 1 0 0
chr17:39660232|39660515 hsa-miR-6886-5p 0 1 0
chr17:39660232|39660515 hsa-miR-6781-5p 1 0 0
chr17:39660232|39660515 hsa-miR-7112-5p 0 1 0
chr17:39660232|39660515 hsa-miR-660-3p 0 1 0
chr17:39660232|39660515 hsa-miR-5000-3p 0 1 0
chr17:39660232|39660515 hsa-miR-4750-5p 1 0 0
chr17:39660232|39660515 hsa-miR-6826-3p 0 1 0
chr17:39660232|39660515 hsa-miR-6886-3p 0 1 0
chr17:39660232|39660515 hsa-miR-6795-3p 0 1 0
chr17:39660232|39660515 hsa-miR-6734-3p 0 1 0
chr17:39660232|39660515 hsa-miR-10400-5p 1 0 0
chr17:39660232|39660515 hsa-miR-1207-5p 1 1 0
chr17:39660232|39660515 hsa-miR-4763-3p 1 1 0
chr17:39660232|39660515 hsa-miR-6865-5p 1 0 0
chr17:39660232|39660515 hsa-miR-6775-5p 1 0 0
chr17:39660232|39660515 hsa-miR-5001-5p 1 1 0
chr17:39660232|39660515 hsa-miR-6743-5p 1 0 0
chr17:39660232|39660515 hsa-miR-6754-5p 1 0 0
chr17:39660232|39660515 hsa-miR-6756-5p 1 0 0
chr17:39660232|39660515 hsa-miR-6722-3p 1 1 0
chr17:39660232|39660515 hsa-miR-6774-5p 0 1 0
chr17:39660232|39660515 hsa-miR-6797-5p 1 0 0
chr17:39660232|39660515 hsa-miR-6808-5p 1 1 0
chr17:39660232|39660515 hsa-miR-6879-5p 1 1 0
chr17:39660232|39660515 hsa-miR-7111-5p 1 0 0
chr17:39660232|39660515 hsa-miR-3620-5p 1 0 0
chr17:39660232|39660515 hsa-miR-5196-5p 1 0 0
chr17:39660232|39660515 hsa-miR-6780b-5p 1 0 0
chr17:39660232|39660515 hsa-miR-6836-5p 1 0 0
chr17:39660232|39660515 hsa-miR-328-5p 1 1 0
chr17:39660232|39660515 hsa-miR-4632-5p 1 1 0
chr17:39660232|39660515 hsa-miR-4685-5p 0 1 0
chr17:39660232|39660515 hsa-miR-6735-5p 1 1 0
chr17:39660232|39660515 hsa-miR-6846-5p 0 1 0
chr17:39660232|39660515 hsa-miR-6848-5p 1 1 0
chr17:39660232|39660515 hsa-miR-4436b-3p 1 1 0
chr17:39660232|39660515 hsa-miR-6885-5p 0 1 0
chr17:39660232|39660515 hsa-miR-5008-3p 0 1 0
chr17:39660232|39660515 hsa-miR-6791-3p 0 1 0
chr17:39660232|39660515 hsa-miR-4646-5p 1 0 0
chr17:39660232|39660515 hsa-miR-6724-5p 1 0 0
chr17:39660232|39660515 hsa-miR-6893-3p 1 0 0
chr17:39660232|39660515 hsa-miR-10400-3p 0 1 0
chr17:39660232|39660515 hsa-miR-10394-5p 1 1 0
chr17:39660232|39660515 hsa-miR-6876-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:39660232|39660515
ORF Type ORF1
Protein Length 82
Nucleotide Length 246
Protein Sequence MKVSEGSGCPGAPDSTGGSRKVPRGPLVGAPHQEGRVGLPEPIWHHPALCRPVPDLPALSCGARVPGGDPAAREDGAVEQDS
Nucleotide Sequence CTGAAGGTGAGTGAGGGGAGCGGGTGTCCTGGAGCCCCAGACAGCACAGGAGGCTCCAGGAAGGTGCCGAGGGGCCCTCTGGTGGGTGCCCCCCACCAAGAGGGAAGGGTTGGTCTGCCCGAGCCCATCTGGCACCACCCAGCCCTCTGCCGCCCTGTCCCAGACCTTCCTGCCCTGTCCTGCGGAGCTCGTGTACCAGGAGGTGATCCTGCAGCCCGAGAGGATGGTGCTGTGGAACAAGACAGT

CircID chr17:39660232|39660515
ORF Type ORF2
Protein Length 73
Nucleotide Length 219
Protein Sequence MEPQTAQEAPGRCRGALWWVPPTKREGLVCPSPSGTTQPSAALSQTFLPCPAELVYQEVILQPERMVLWNKTV
Nucleotide Sequence CTGGAGCCCCAGACAGCACAGGAGGCTCCAGGAAGGTGCCGAGGGGCCCTCTGGTGGGTGCCCCCCACCAAGAGGGAAGGGTTGGTCTGCCCGAGCCCATCTGGCACCACCCAGCCCTCTGCCGCCCTGTCCCAGACCTTCCTGCCCTGTCCTGCGGAGCTCGTGTACCAGGAGGTGATCCTGCAGCCCGAGAGGATGGTGCTGTGGAACAAGACAGTG

CircID chr17:39660232|39660515
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MAPPSPLPPCPRPSCPVLRSSCTRR
Nucleotide Sequence CTGGCACCACCCAGCCCTCTGCCGCCCTGTCCCAGACCTTCCTGCCCTGTCCTGCGGAGCTCGTGTACCAGGAGGTGA

CircID chr17:39660232|39660515
ORF Type ORF4
Protein Length 87
Nucleotide Length 264
Protein Sequence MSCSTAPSSRAAGSPPGTRAPQDRAGRSGTGRQRAGWCQMGSGRPTLPSWWGAPTRGPLGTFLEPPVLSGAPGHPLPSLTFRINVLP
Nucleotide Sequence CTGTCTTGTTCCACAGCACCATCCTCTCGGGCTGCAGGATCACCTCCTGGTACACGAGCTCCGCAGGACAGGGCAGGAAGGTCTGGGACAGGGCGGCAGAGGGCTGGGTGGTGCCAGATGGGCTCGGGCAGACCAACCCTTCCCTCTTGGTGGGGGGCACCCACCAGAGGGCCCCTCGGCACCTTCCTGGAGCCTCCTGTGCTGTCTGGGGCTCCAGGACACCCGCTCCCCTCACTCACCTTCAGGATAAACGTCTTGCCGTGA

CircID chr17:39660232|39660515
ORF Type ORF5
Protein Length 72
Nucleotide Length 219
Protein Sequence MQDHLLVHELRRTGQEGLGQGGRGLGGARWARADQPFPLGGGHPPEGPSAPSWSLLCCLGLQDTRSPHSPSG
Nucleotide Sequence CTGCAGGATCACCTCCTGGTACACGAGCTCCGCAGGACAGGGCAGGAAGGTCTGGGACAGGGCGGCAGAGGGCTGGGTGGTGCCAGATGGGCTCGGGCAGACCAACCCTTCCCTCTTGGTGGGGGGCACCCACCAGAGGGCCCCTCGGCACCTTCCTGGAGCCTCCTGTGCTGTCTGGGGCTCCAGGACACCCGCTCCCCTCACTCACCTTCAGGATAA

CircID chr17:39660232|39660515
ORF Type ORF6
Protein Length 92
Nucleotide Length 276
Protein Sequence MFHSTILSGCRITSWYTSSAGQGRKVWDRAAEGWVVPDGLGQTNPSLLVGGTHQRAPRHLPGASCAVWGSRTPAPLTHLQDKRLAVKGNFNG
Nucleotide Sequence TTGTTCCACAGCACCATCCTCTCGGGCTGCAGGATCACCTCCTGGTACACGAGCTCCGCAGGACAGGGCAGGAAGGTCTGGGACAGGGCGGCAGAGGGCTGGGTGGTGCCAGATGGGCTCGGGCAGACCAACCCTTCCCTCTTGGTGGGGGGCACCCACCAGAGGGCCCCTCGGCACCTTCCTGGAGCCTCCTGTGCTGTCTGGGGCTCCAGGACACCCGCTCCCCTCACTCACCTTCAGGATAAACGTCTTGCCGTGAAAGGGAACTTCAATGGT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites