CircRNA Information

General Information
circRNA Basic Information
CircID chr17:39711990|39712365
Strand +
CircType exon
Host Gene ENSG00000141736.12;
Algorism CIRI2;
Sequence TGCCCTCACCTCTCGCAAGTGCTCCATGCCCAGACCATAGCACACTGAGGAGGTGGGGGTGGGTGGGGAAGGGGCCGTCTCAGCCTTCATACCGGGACAGGTCAACAGCCACATGAGCATCAGGGTCCGGGCCCCTCCCCACACTGACAGGGGATATAGGGACACTTGTAGGGCTGAGGGGGGCCAGGGGTAGAGAGTAGAAGGCAGAGACTAGGTCCCAAGAGGGTCTGAGGAAGGATAGGACAGGGTGGGCTGGGCCAGGCTGCATGCGCAGAGGGACAGGAACTGCAGCTGGCCTCGGGGGCAGTGAGTGGGTACCTCGGGCACAGGGCTTGCTGCACTTCTCACACCGCTGTGTTCCATCCTCTGCTGTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:39711990|39712365 hsa-miR-107 0 0 1
chr17:39711990|39712365 hsa-miR-192-5p 0 0 1
chr17:39711990|39712365 hsa-miR-192-3p 0 0 1
chr17:39711990|39712365 hsa-miR-10a-5p 0 0 1
chr17:39711990|39712365 hsa-miR-10a-3p 0 0 1
chr17:39711990|39712365 hsa-miR-10b-5p 0 0 1
chr17:39711990|39712365 hsa-miR-10b-3p 0 0 1
chr17:39711990|39712365 hsa-miR-215-5p 0 0 1
chr17:39711990|39712365 hsa-miR-215-3p 0 0 1
chr17:39711990|39712365 hsa-miR-223-5p 0 0 1
chr17:39711990|39712365 hsa-miR-223-3p 0 0 1
chr17:39711990|39712365 hsa-miR-504-5p 0 0 1
chr17:39711990|39712365 hsa-miR-504-3p 0 0 1
chr17:39711990|39712365 hsa-miR-593-5p 0 0 1
chr17:39711990|39712365 hsa-miR-593-3p 0 0 1
chr17:39711990|39712365 hsa-miR-612 0 1 1
chr17:39711990|39712365 hsa-miR-631 1 0 1
chr17:39711990|39712365 hsa-miR-635 0 0 1
chr17:39711990|39712365 hsa-miR-648 0 0 1
chr17:39711990|39712365 hsa-miR-922 0 1 1
chr17:39711990|39712365 hsa-miR-939-5p 0 0 1
chr17:39711990|39712365 hsa-miR-939-3p 0 0 1
chr17:39711990|39712365 hsa-miR-1253 0 0 1
chr17:39711990|39712365 hsa-miR-1267 0 0 1
chr17:39711990|39712365 hsa-miR-139-3p 0 0 1
chr17:39711990|39712365 hsa-miR-491-5p 0 0 1
chr17:39711990|39712365 hsa-miR-146b-3p 1 0 1
chr17:39711990|39712365 hsa-miR-339-5p 1 1 1
chr17:39711990|39712365 hsa-miR-423-5p 0 0 1
chr17:39711990|39712365 hsa-miR-1224-3p 1 1 1
chr17:39711990|39712365 hsa-miR-501-5p 0 0 1
chr17:39711990|39712365 hsa-miR-331-3p 0 1 1
chr17:39711990|39712365 hsa-miR-324-3p 0 1 1
chr17:39711990|39712365 hsa-miR-362-5p 0 0 1
chr17:39711990|39712365 hsa-miR-1302 0 0 1
chr17:39711990|39712365 hsa-miR-519b-3p 0 0 1
chr17:39711990|39712365 hsa-miR-519c-3p 0 0 1
chr17:39711990|39712365 hsa-miR-542-3p 0 0 1
chr17:39711990|39712365 hsa-miR-642 0 0 1
chr17:39711990|39712365 hsa-miR-103 0 0 1
chr17:39711990|39712365 hsa-miR-1300 0 0 1
chr17:39711990|39712365 hsa-miR-1285 0 0 1
chr17:39711990|39712365 hsa-miR-519a 0 0 1
chr17:39711990|39712365 hsa-miR-346 1 0 0
chr17:39711990|39712365 hsa-miR-484 1 0 0
chr17:39711990|39712365 hsa-miR-554 1 0 0
chr17:39711990|39712365 hsa-miR-595 0 1 0
chr17:39711990|39712365 hsa-miR-661 1 0 0
chr17:39711990|39712365 hsa-miR-662 1 0 0
chr17:39711990|39712365 hsa-miR-764 1 0 0
chr17:39711990|39712365 hsa-miR-936 1 1 0
chr17:39711990|39712365 hsa-miR-1202 0 1 0
chr17:39711990|39712365 hsa-miR-1538 1 1 0
chr17:39711990|39712365 hsa-miR-1913 1 1 0
chr17:39711990|39712365 hsa-miR-3176 1 0 0
chr17:39711990|39712365 hsa-miR-4312 1 0 0
chr17:39711990|39712365 hsa-miR-3649 0 1 0
chr17:39711990|39712365 hsa-miR-1268b 1 0 0
chr17:39711990|39712365 hsa-miR-2392 0 1 0
chr17:39711990|39712365 hsa-miR-4522 1 0 0
chr17:39711990|39712365 hsa-miR-4641 1 0 0
chr17:39711990|39712365 hsa-miR-4710 0 1 0
chr17:39711990|39712365 hsa-miR-4741 1 0 0
chr17:39711990|39712365 hsa-miR-4748 1 0 0
chr17:39711990|39712365 hsa-miR-6070 0 1 0
chr17:39711990|39712365 hsa-miR-6075 1 0 0
chr17:39711990|39712365 hsa-miR-6860 0 1 0
chr17:39711990|39712365 hsa-miR-7703 1 0 0
chr17:39711990|39712365 hsa-miR-4747-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6747-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6836-3p 1 0 0
chr17:39711990|39712365 hsa-miR-671-5p 1 0 0
chr17:39711990|39712365 hsa-miR-149-5p 1 0 0
chr17:39711990|39712365 hsa-miR-6825-5p 0 1 0
chr17:39711990|39712365 hsa-miR-6894-5p 1 0 0
chr17:39711990|39712365 hsa-miR-6720-5p 1 0 0
chr17:39711990|39712365 hsa-miR-1233-3p 1 0 0
chr17:39711990|39712365 hsa-miR-766-3p 1 0 0
chr17:39711990|39712365 hsa-miR-4722-5p 1 0 0
chr17:39711990|39712365 hsa-miR-7160-5p 1 0 0
chr17:39711990|39712365 hsa-miR-296-5p 1 0 0
chr17:39711990|39712365 hsa-miR-6875-3p 1 0 0
chr17:39711990|39712365 hsa-miR-874-3p 0 1 0
chr17:39711990|39712365 hsa-miR-6873-3p 0 1 0
chr17:39711990|39712365 hsa-miR-6849-3p 1 0 0
chr17:39711990|39712365 hsa-miR-1915-5p 1 0 0
chr17:39711990|39712365 hsa-miR-3663-5p 1 0 0
chr17:39711990|39712365 hsa-miR-3605-5p 0 1 0
chr17:39711990|39712365 hsa-miR-877-3p 0 1 0
chr17:39711990|39712365 hsa-miR-6728-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6774-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6735-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6858-3p 1 0 0
chr17:39711990|39712365 hsa-miR-615-5p 1 0 0
chr17:39711990|39712365 hsa-miR-4763-5p 1 0 0
chr17:39711990|39712365 hsa-miR-7108-3p 1 0 0
chr17:39711990|39712365 hsa-miR-1247-5p 1 0 0
chr17:39711990|39712365 hsa-miR-4707-3p 1 0 0
chr17:39711990|39712365 hsa-miR-5001-3p 1 0 0
chr17:39711990|39712365 hsa-miR-7113-3p 1 0 0
chr17:39711990|39712365 hsa-miR-3191-5p 1 0 0
chr17:39711990|39712365 hsa-miR-4783-5p 1 0 0
chr17:39711990|39712365 hsa-miR-6847-5p 1 1 0
chr17:39711990|39712365 hsa-miR-4743-3p 1 0 0
chr17:39711990|39712365 hsa-miR-7111-3p 1 0 0
chr17:39711990|39712365 hsa-miR-1266-3p 1 1 0
chr17:39711990|39712365 hsa-miR-4667-3p 1 0 0
chr17:39711990|39712365 hsa-miR-149-3p 0 1 0
chr17:39711990|39712365 hsa-miR-1304-3p 0 1 0
chr17:39711990|39712365 hsa-miR-3190-5p 1 0 0
chr17:39711990|39712365 hsa-miR-4646-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6870-3p 0 1 0
chr17:39711990|39712365 hsa-miR-3120-3p 1 0 0
chr17:39711990|39712365 hsa-miR-4776-3p 1 0 0
chr17:39711990|39712365 hsa-miR-1237-3p 1 1 0
chr17:39711990|39712365 hsa-miR-1236-3p 1 1 0
chr17:39711990|39712365 hsa-miR-4742-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6889-3p 1 1 0
chr17:39711990|39712365 hsa-miR-4687-5p 1 0 0
chr17:39711990|39712365 hsa-miR-6813-3p 1 0 0
chr17:39711990|39712365 hsa-miR-4732-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6828-3p 1 0 0
chr17:39711990|39712365 hsa-miR-3944-5p 1 1 0
chr17:39711990|39712365 hsa-miR-4758-3p 1 0 0
chr17:39711990|39712365 hsa-miR-1910-5p 1 0 0
chr17:39711990|39712365 hsa-miR-670-3p 0 1 0
chr17:39711990|39712365 hsa-miR-1180-5p 1 0 0
chr17:39711990|39712365 hsa-miR-2276-5p 0 1 0
chr17:39711990|39712365 hsa-miR-6741-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6513-3p 0 1 0
chr17:39711990|39712365 hsa-miR-6895-3p 1 0 0
chr17:39711990|39712365 hsa-miR-4632-3p 1 0 0
chr17:39711990|39712365 hsa-miR-3160-5p 1 1 0
chr17:39711990|39712365 hsa-miR-1914-5p 1 1 0
chr17:39711990|39712365 hsa-miR-5088-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6738-3p 1 1 0
chr17:39711990|39712365 hsa-miR-4749-3p 1 0 0
chr17:39711990|39712365 hsa-miR-328-3p 1 1 0
chr17:39711990|39712365 hsa-miR-6777-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6794-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6760-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6880-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6883-3p 1 1 0
chr17:39711990|39712365 hsa-miR-6748-3p 1 1 0
chr17:39711990|39712365 hsa-miR-7152-5p 1 1 0
chr17:39711990|39712365 hsa-miR-3670 1 0 0
chr17:39711990|39712365 hsa-miR-3620-3p 1 0 0
chr17:39711990|39712365 hsa-miR-4433a-5p 1 0 0
chr17:39711990|39712365 hsa-miR-5584-3p 0 1 0
chr17:39711990|39712365 hsa-miR-4750-3p 1 0 0
chr17:39711990|39712365 hsa-miR-3173-5p 1 0 0
chr17:39711990|39712365 hsa-miR-6779-3p 1 1 0
chr17:39711990|39712365 hsa-miR-4433b-5p 1 0 0
chr17:39711990|39712365 hsa-miR-6734-3p 1 1 0
chr17:39711990|39712365 hsa-miR-6847-3p 1 1 0
chr17:39711990|39712365 hsa-miR-6780b-3p 1 0 0
chr17:39711990|39712365 hsa-miR-4727-5p 1 0 0
chr17:39711990|39712365 hsa-miR-642a-5p 0 1 0
chr17:39711990|39712365 hsa-miR-6761-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6732-3p 1 1 0
chr17:39711990|39712365 hsa-miR-6890-3p 1 0 0
chr17:39711990|39712365 hsa-miR-3162-3p 1 1 0
chr17:39711990|39712365 hsa-miR-676-3p 0 1 0
chr17:39711990|39712365 hsa-miR-3664-5p 1 0 0
chr17:39711990|39712365 hsa-miR-4740-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6816-5p 1 0 0
chr17:39711990|39712365 hsa-miR-6775-5p 1 0 0
chr17:39711990|39712365 hsa-miR-10401-5p 0 1 0
chr17:39711990|39712365 hsa-miR-6763-5p 0 1 0
chr17:39711990|39712365 hsa-miR-3127-3p 0 1 0
chr17:39711990|39712365 hsa-miR-4685-3p 1 0 0
chr17:39711990|39712365 hsa-miR-3620-5p 1 0 0
chr17:39711990|39712365 hsa-miR-4745-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6735-5p 1 0 0
chr17:39711990|39712365 hsa-miR-10396a-3p 1 0 0
chr17:39711990|39712365 hsa-miR-10396b-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6799-3p 1 1 0
chr17:39711990|39712365 hsa-miR-6877-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6785-5p 0 1 0
chr17:39711990|39712365 hsa-miR-3184-5p 0 1 0
chr17:39711990|39712365 hsa-miR-550a-5p 1 0 0
chr17:39711990|39712365 hsa-miR-193b-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6756-3p 0 1 0
chr17:39711990|39712365 hsa-miR-6862-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6810-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6775-3p 1 0 0
chr17:39711990|39712365 hsa-miR-9851-3p 1 0 0
chr17:39711990|39712365 hsa-miR-10392-3p 0 1 0
chr17:39711990|39712365 hsa-miR-3059-5p 1 0 0
chr17:39711990|39712365 hsa-miR-6529-3p 1 1 0
chr17:39711990|39712365 hsa-miR-6769b-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6819-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6848-3p 1 0 0
chr17:39711990|39712365 hsa-miR-1234-3p 1 1 0
chr17:39711990|39712365 hsa-miR-3619-5p 1 0 0
chr17:39711990|39712365 hsa-miR-6781-3p 0 1 0
chr17:39711990|39712365 hsa-miR-4690-3p 1 0 0
chr17:39711990|39712365 hsa-miR-4769-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6833-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6737-3p 1 0 0
chr17:39711990|39712365 hsa-miR-6843-3p 1 0 0
chr17:39711990|39712365 hsa-miR-7155-3p 1 0 0
chr17:39711990|39712365 hsa-miR-5699-3p 1 1 0
chr17:39711990|39712365 hsa-miR-3913-5p 0 1 0
chr17:39711990|39712365 hsa-miR-3136-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:39711990|39712365
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MGQAACAEGQELQLASGAVSGYLGHRACCTSHTAVFHPLLS
Nucleotide Sequence CTGGGCCAGGCTGCATGCGCAGAGGGACAGGAACTGCAGCTGGCCTCGGGGGCAGTGAGTGGGTACCTCGGGCACAGGGCTTGCTGCACTTCTCACACCGCTGTGTTCCATCCTCTGCTGTCA
CircID chr17:39711990|39712365
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MSIRVRAPPHTDRGYRDTCRAEGGQG
Nucleotide Sequence ATGAGCATCAGGGTCCGGGCCCCTCCCCACACTGACAGGGGATATAGGGACACTTGTAGGGCTGAGGGGGGCCAGGGGTAG
CircID chr17:39711990|39712365
ORF Type ORF3
Protein Length 49
Nucleotide Length 147
Protein Sequence MRKDRTGWAGPGCMRRGTGTAAGLGGSEWVPRAQGLLHFSHRCVPSSAV
Nucleotide Sequence CTGAGGAAGGATAGGACAGGGTGGGCTGGGCCAGGCTGCATGCGCAGAGGGACAGGAACTGCAGCTGGCCTCGGGGGCAGTGAGTGGGTACCTCGGGCACAGGGCTTGCTGCACTTCTCACACCGCTGTGTTCCATCCTCTGCTGTC
CircID chr17:39711990|39712365
ORF Type ORF4
Protein Length 75
Nucleotide Length 228
Protein Sequence MPPRPAAVPVPLRMQPGPAHPVLSFLRPSWDLVSAFYSLPLAPLSPTSVPISPVSVGRGPDPDAHVAVDLSRYEG
Nucleotide Sequence CTGCCCCCGAGGCCAGCTGCAGTTCCTGTCCCTCTGCGCATGCAGCCTGGCCCAGCCCACCCTGTCCTATCCTTCCTCAGACCCTCTTGGGACCTAGTCTCTGCCTTCTACTCTCTACCCCTGGCCCCCCTCAGCCCTACAAGTGTCCCTATATCCCCTGTCAGTGTGGGGAGGGGCCCGGACCCTGATGCTCATGTGGCTGTTGACCTGTCCCGGTATGAAGGCTGA
CircID chr17:39711990|39712365
ORF Type ORF5
Protein Length 50
Nucleotide Length 153
Protein Sequence MEHSGVRSAASPVPEVPTHCPRGQLQFLSLCACSLAQPTLSYPSSDPLGT
Nucleotide Sequence ATGGAACACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGGTACCCACTCACTGCCCCCGAGGCCAGCTGCAGTTCCTGTCCCTCTGCGCATGCAGCCTGGCCCAGCCCACCCTGTCCTATCCTTCCTCAGACCCTCTTGGGACCTAG
CircID chr17:39711990|39712365
ORF Type ORF6
Protein Length 69
Nucleotide Length 207
Protein Sequence MPSTLYPWPPSALQVSLYPLSVWGGARTLMLMWLLTCPGMKAETAPSPPTPTSSVCYGLGMEHLREVRA
Nucleotide Sequence CTGCCTTCTACTCTCTACCCCTGGCCCCCCTCAGCCCTACAAGTGTCCCTATATCCCCTGTCAGTGTGGGGAGGGGCCCGGACCCTGATGCTCATGTGGCTGTTGACCTGTCCCGGTATGAAGGCTGAGACGGCCCCTTCCCCACCCACCCCCACCTCCTCAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGAGAGGTGAGGGCA
CircID chr17:39711990|39712365
ORF Type ORF7
Protein Length 69
Nucleotide Length 210
Protein Sequence MCPRYPLTAPEASCSSCPSAHAAWPSPPCPILPQTLLGPSLCLLLSTPGPPQPYKCPYIPCQCGEGPGP
Nucleotide Sequence CTGTGCCCGAGGTACCCACTCACTGCCCCCGAGGCCAGCTGCAGTTCCTGTCCCTCTGCGCATGCAGCCTGGCCCAGCCCACCCTGTCCTATCCTTCCTCAGACCCTCTTGGGACCTAGTCTCTGCCTTCTACTCTCTACCCCTGGCCCCCCTCAGCCCTACAAGTGTCCCTATATCCCCTGTCAGTGTGGGGAGGGGCCCGGACCCTGA
CircID chr17:39711990|39712365
ORF Type ORF8
Protein Length 25
Nucleotide Length 78
Protein Sequence MRRPLPHPPPPPQCAMVWAWSTCER
Nucleotide Sequence CTGAGACGGCCCCTTCCCCACCCACCCCCACCTCCTCAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGAGAGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab