CircRNA Information

General Information
circRNA Basic Information
CircID chr17:39715290|39715504
Strand -
CircType exon
Host Gene ENSG00000141736.12;
Algorism CIRI2;
Sequence CCAGCCTCCAACACTGCCCCGCTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCTGGAAGAGATCACAGGTGGGCTCTGTCTCTGCATCCTGTTCTGCAGGGGCTGGGAGTCCTTGTCCTGTCCCCACTCCTTTAATCTCACCCTCTGCCTGCAGGTTACCTATACATCTCAGCATGGCCGGACAGCCTGCCTGACCTCAGCGTCTTCCAGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:39715290|39715504 hsa-miR-34a-5p 0 0 1
chr17:39715290|39715504 hsa-miR-34a-3p 0 0 1
chr17:39715290|39715504 hsa-miR-143-5p 0 0 1
chr17:39715290|39715504 hsa-miR-143-3p 0 0 1
chr17:39715290|39715504 hsa-miR-149-5p 0 0 1
chr17:39715290|39715504 hsa-miR-149-3p 0 0 1
chr17:39715290|39715504 hsa-miR-449a 0 1 1
chr17:39715290|39715504 hsa-miR-432-5p 0 0 1
chr17:39715290|39715504 hsa-miR-432-3p 0 0 1
chr17:39715290|39715504 hsa-miR-558 0 0 1
chr17:39715290|39715504 hsa-miR-649 0 0 1
chr17:39715290|39715504 hsa-miR-650 0 0 1
chr17:39715290|39715504 hsa-miR-449b-5p 0 0 1
chr17:39715290|39715504 hsa-miR-449b-3p 0 0 1
chr17:39715290|39715504 hsa-miR-298 0 0 1
chr17:39715290|39715504 hsa-miR-890 0 0 1
chr17:39715290|39715504 hsa-miR-744-5p 0 0 1
chr17:39715290|39715504 hsa-miR-744-3p 0 0 1
chr17:39715290|39715504 hsa-miR-940 0 0 1
chr17:39715290|39715504 hsa-miR-1236-5p 0 0 1
chr17:39715290|39715504 hsa-miR-1236-3p 0 0 1
chr17:39715290|39715504 hsa-miR-1205 0 0 1
chr17:39715290|39715504 hsa-miR-1299 0 1 1
chr17:39715290|39715504 hsa-miR-491-5p 0 0 1
chr17:39715290|39715504 hsa-miR-486-3p 0 0 1
chr17:39715290|39715504 hsa-miR-485-5p 0 0 1
chr17:39715290|39715504 hsa-miR-490-3p 0 0 1
chr17:39715290|39715504 hsa-miR-525-5p 0 0 1
chr17:39715290|39715504 hsa-miR-1224-3p 0 1 1
chr17:39715290|39715504 hsa-miR-875-3p 1 0 1
chr17:39715290|39715504 hsa-miR-520a-5p 0 1 1
chr17:39715290|39715504 hsa-miR-34c-5p 0 1 1
chr17:39715290|39715504 hsa-miR-371-5p 0 0 1
chr17:39715290|39715504 hsa-miR-7 0 0 1
chr17:39715290|39715504 hsa-miR-516b 0 0 1
chr17:39715290|39715504 hsa-miR-768-5p 0 0 1
chr17:39715290|39715504 hsa-miR-608 1 1 0
chr17:39715290|39715504 hsa-miR-637 1 0 0
chr17:39715290|39715504 hsa-miR-663a 1 0 0
chr17:39715290|39715504 hsa-miR-658 1 0 0
chr17:39715290|39715504 hsa-miR-762 1 0 0
chr17:39715290|39715504 hsa-miR-1183 1 0 0
chr17:39715290|39715504 hsa-miR-1268a 1 0 0
chr17:39715290|39715504 hsa-miR-3141 1 0 0
chr17:39715290|39715504 hsa-miR-3147 1 0 0
chr17:39715290|39715504 hsa-miR-3171 0 1 0
chr17:39715290|39715504 hsa-miR-4298 1 1 0
chr17:39715290|39715504 hsa-miR-4257 1 0 0
chr17:39715290|39715504 hsa-miR-4270 1 0 0
chr17:39715290|39715504 hsa-miR-3936 1 0 0
chr17:39715290|39715504 hsa-miR-1268b 1 0 0
chr17:39715290|39715504 hsa-miR-4428 1 0 0
chr17:39715290|39715504 hsa-miR-4430 1 1 0
chr17:39715290|39715504 hsa-miR-4436a 0 1 0
chr17:39715290|39715504 hsa-miR-3135b 1 1 0
chr17:39715290|39715504 hsa-miR-4505 1 0 0
chr17:39715290|39715504 hsa-miR-4514 1 1 0
chr17:39715290|39715504 hsa-miR-4533 1 0 0
chr17:39715290|39715504 hsa-miR-4651 1 0 0
chr17:39715290|39715504 hsa-miR-4656 1 0 0
chr17:39715290|39715504 hsa-miR-4663 1 0 0
chr17:39715290|39715504 hsa-miR-4673 1 0 0
chr17:39715290|39715504 hsa-miR-4692 1 1 0
chr17:39715290|39715504 hsa-miR-4706 1 0 0
chr17:39715290|39715504 hsa-miR-4734 1 0 0
chr17:39715290|39715504 hsa-miR-4736 1 0 0
chr17:39715290|39715504 hsa-miR-4741 1 0 0
chr17:39715290|39715504 hsa-miR-5090 0 1 0
chr17:39715290|39715504 hsa-miR-5787 1 1 0
chr17:39715290|39715504 hsa-miR-6077 1 0 0
chr17:39715290|39715504 hsa-miR-6088 1 0 0
chr17:39715290|39715504 hsa-miR-6125 1 0 0
chr17:39715290|39715504 hsa-miR-7150 1 0 0
chr17:39715290|39715504 hsa-miR-7977 0 1 0
chr17:39715290|39715504 hsa-miR-8072 1 0 0
chr17:39715290|39715504 hsa-miR-8089 1 0 0
chr17:39715290|39715504 hsa-miR-12118 1 0 0
chr17:39715290|39715504 hsa-miR-4433b-3p 1 1 0
chr17:39715290|39715504 hsa-miR-504-3p 1 0 0
chr17:39715290|39715504 hsa-miR-4700-3p 0 1 0
chr17:39715290|39715504 hsa-miR-6747-5p 1 0 0
chr17:39715290|39715504 hsa-miR-4433a-3p 1 1 0
chr17:39715290|39715504 hsa-miR-6765-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6894-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6857-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6510-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6728-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6804-5p 1 0 0
chr17:39715290|39715504 hsa-miR-139-3p 1 0 0
chr17:39715290|39715504 hsa-miR-6833-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6757-5p 1 0 0
chr17:39715290|39715504 hsa-miR-7847-3p 1 0 0
chr17:39715290|39715504 hsa-miR-3064-5p 0 1 0
chr17:39715290|39715504 hsa-miR-7160-5p 1 1 0
chr17:39715290|39715504 hsa-miR-6727-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6806-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6742-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6716-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6871-5p 1 0 0
chr17:39715290|39715504 hsa-miR-3151-5p 1 0 0
chr17:39715290|39715504 hsa-miR-3180-3p 1 0 0
chr17:39715290|39715504 hsa-miR-6829-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6732-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6805-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6798-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6881-5p 1 0 0
chr17:39715290|39715504 hsa-miR-2467-3p 1 1 0
chr17:39715290|39715504 hsa-miR-6782-5p 1 1 0
chr17:39715290|39715504 hsa-miR-6514-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6810-5p 1 1 0
chr17:39715290|39715504 hsa-miR-6786-5p 1 0 0
chr17:39715290|39715504 hsa-miR-7109-5p 1 0 0
chr17:39715290|39715504 hsa-miR-1226-5p 1 0 0
chr17:39715290|39715504 hsa-miR-30c-2-3p 1 0 0
chr17:39715290|39715504 hsa-miR-885-3p 1 0 0
chr17:39715290|39715504 hsa-miR-1908-5p 1 0 0
chr17:39715290|39715504 hsa-miR-1228-5p 1 0 0
chr17:39715290|39715504 hsa-miR-296-3p 1 0 0
chr17:39715290|39715504 hsa-miR-6771-5p 1 0 0
chr17:39715290|39715504 hsa-miR-3614-5p 0 1 0
chr17:39715290|39715504 hsa-miR-877-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6847-5p 1 0 0
chr17:39715290|39715504 hsa-miR-7854-3p 1 0 0
chr17:39715290|39715504 hsa-miR-4787-5p 1 0 0
chr17:39715290|39715504 hsa-miR-3162-5p 1 0 0
chr17:39715290|39715504 hsa-miR-3158-5p 0 1 0
chr17:39715290|39715504 hsa-miR-6892-5p 1 0 0
chr17:39715290|39715504 hsa-miR-7112-5p 1 0 0
chr17:39715290|39715504 hsa-miR-3180-5p 0 1 0
chr17:39715290|39715504 hsa-miR-4773 0 1 0
chr17:39715290|39715504 hsa-miR-4746-3p 1 0 0
chr17:39715290|39715504 hsa-miR-6501-3p 0 1 0
chr17:39715290|39715504 hsa-miR-4524a-3p 0 1 0
chr17:39715290|39715504 hsa-miR-589-3p 0 1 0
chr17:39715290|39715504 hsa-miR-10400-5p 1 0 0
chr17:39715290|39715504 hsa-miR-1207-5p 1 0 0
chr17:39715290|39715504 hsa-miR-4763-3p 1 0 0
chr17:39715290|39715504 hsa-miR-6769b-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6787-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6812-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6816-5p 1 1 0
chr17:39715290|39715504 hsa-miR-6870-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6893-5p 1 1 0
chr17:39715290|39715504 hsa-miR-6775-5p 0 1 0
chr17:39715290|39715504 hsa-miR-6737-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6743-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6752-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6756-5p 1 1 0
chr17:39715290|39715504 hsa-miR-6803-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6813-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6819-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6842-5p 1 0 0
chr17:39715290|39715504 hsa-miR-7110-5p 1 0 0
chr17:39715290|39715504 hsa-miR-10401-5p 1 0 0
chr17:39715290|39715504 hsa-miR-11181-3p 1 0 0
chr17:39715290|39715504 hsa-miR-1249-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6722-3p 1 0 0
chr17:39715290|39715504 hsa-miR-6751-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6808-5p 1 1 0
chr17:39715290|39715504 hsa-miR-7111-5p 1 0 0
chr17:39715290|39715504 hsa-miR-3620-5p 1 0 0
chr17:39715290|39715504 hsa-miR-4728-5p 1 0 0
chr17:39715290|39715504 hsa-miR-10396a-5p 1 0 0
chr17:39715290|39715504 hsa-miR-10396b-5p 1 0 0
chr17:39715290|39715504 hsa-miR-1237-5p 1 0 0
chr17:39715290|39715504 hsa-miR-1909-3p 1 0 0
chr17:39715290|39715504 hsa-miR-328-5p 1 0 0
chr17:39715290|39715504 hsa-miR-4745-5p 1 1 0
chr17:39715290|39715504 hsa-miR-4749-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6735-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6795-5p 1 1 0
chr17:39715290|39715504 hsa-miR-6846-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6848-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6883-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6887-5p 1 0 0
chr17:39715290|39715504 hsa-miR-6831-5p 1 1 0
chr17:39715290|39715504 hsa-miR-1238-5p 1 0 0
chr17:39715290|39715504 hsa-miR-4758-5p 1 0 0
chr17:39715290|39715504 hsa-miR-1910-3p 1 0 0
chr17:39715290|39715504 hsa-miR-6511a-5p 1 1 0
chr17:39715290|39715504 hsa-miR-6511b-5p 1 1 0
chr17:39715290|39715504 hsa-miR-6736-5p 1 0 0
chr17:39715290|39715504 hsa-miR-3173-3p 1 0 0
chr17:39715290|39715504 hsa-miR-6891-5p 1 0 0
chr17:39715290|39715504 hsa-miR-541-3p 1 0 0
chr17:39715290|39715504 hsa-miR-6791-5p 1 0 0
chr17:39715290|39715504 hsa-miR-3619-5p 1 0 0
chr17:39715290|39715504 hsa-miR-371a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:39715290|39715504
ORF Type ORF1
Protein Length 53
Nucleotide Length 159
Protein Sequence MEEITGGLCLCILFCRGWESLSCPHSFNLTLCLQVTYTSQHGRTACLTSASSR
Nucleotide Sequence CTGGAAGAGATCACAGGTGGGCTCTGTCTCTGCATCCTGTTCTGCAGGGGCTGGGAGTCCTTGTCCTGTCCCCACTCCTTTAATCTCACCCTCTGCCTGCAGGTTACCTATACATCTCAGCATGGCCGGACAGCCTGCCTGACCTCAGCGTCTTCCAGA
CircID chr17:39715290|39715504
ORF Type ORF2
Protein Length 60
Nucleotide Length 183
Protein Sequence MPRSSQSSSKCLRLWKRSQVGSVSASCSAGAGSPCPVPTPLISPSACRLPIHLSMAGQPA
Nucleotide Sequence CTGCCCCGCTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCTGGAAGAGATCACAGGTGGGCTCTGTCTCTGCATCCTGTTCTGCAGGGGCTGGGAGTCCTTGTCCTGTCCCCACTCCTTTAATCTCACCCTCTGCCTGCAGGTTACCTATACATCTCAGCATGGCCGGACAGCCTGCCTGA
CircID chr17:39715290|39715504
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MQNRMQRQSPPVISSRVSNTWSCSGWSGAVLEA
Nucleotide Sequence CTGCAGAACAGGATGCAGAGACAGAGCCCACCTGTGATCTCTTCCAGAGTCTCAAACACTTGGAGCTGCTCTGGCTGGAGCGGGGCAGTGTTGGAGGCT
CircID chr17:39715290|39715504
ORF Type ORF4
Protein Length 59
Nucleotide Length 177
Protein Sequence MLRCIGNLQAEGEIKGVGTGQGLPAPAEQDAETEPTCDLFQSLKHLELLWLERGSVGGW
Nucleotide Sequence ATGCTGAGATGTATAGGTAACCTGCAGGCAGAGGGTGAGATTAAAGGAGTGGGGACAGGACAAGGACTCCCAGCCCCTGCAGAACAGGATGCAGAGACAGAGCCCACCTGTGATCTCTTCCAGAGTCTCAAACACTTGGAGCTGCTCTGGCTGGAGCGGGGCAGTGTTGGAGGCTGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab