CircRNA Information

General Information
circRNA Basic Information
CircID chr17:39727481|39727751
Strand -
CircType exon
Host Gene ENSG00000141736.12;
Algorism CIRI2;
Sequence CCCACAGTACCCCTGCCCTCTGAGACTGATGGCTACGTTGCCCCCCTGACCTGCAGCCCCCAGCCTGGTATGGAGTCCAGTCTAAGCAGAGAGACTGATGGGCAGGGGAGGTGGGACCTTCAGCCCAGGGTCCACTGTGGGGGCAGAGGGAGTGGCAGAGACACCGGGGTTCCTTCCCCTAATGGGTCACCTTCTCTTGACCTTTCAGAATATGTGAACCAGCCAGATGTTCGGCCCCAGCCCCCTTCGCCCCGAGAGGGCCCTCTGCCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:39727481|39727751 hsa-miR-23a-5p 0 0 1
chr17:39727481|39727751 hsa-miR-23a-3p 0 0 1
chr17:39727481|39727751 hsa-miR-23b-5p 0 0 1
chr17:39727481|39727751 hsa-miR-23b-3p 0 0 1
chr17:39727481|39727751 hsa-miR-149-5p 0 0 1
chr17:39727481|39727751 hsa-miR-149-3p 0 0 1
chr17:39727481|39727751 hsa-miR-335-5p 0 0 1
chr17:39727481|39727751 hsa-miR-335-3p 0 0 1
chr17:39727481|39727751 hsa-miR-422a 0 1 1
chr17:39727481|39727751 hsa-miR-488-5p 0 0 1
chr17:39727481|39727751 hsa-miR-488-3p 0 0 1
chr17:39727481|39727751 hsa-miR-493-5p 0 0 1
chr17:39727481|39727751 hsa-miR-493-3p 0 0 1
chr17:39727481|39727751 hsa-miR-504-5p 0 0 1
chr17:39727481|39727751 hsa-miR-504-3p 0 0 1
chr17:39727481|39727751 hsa-miR-593-5p 0 0 1
chr17:39727481|39727751 hsa-miR-593-3p 0 0 1
chr17:39727481|39727751 hsa-miR-622 0 0 1
chr17:39727481|39727751 hsa-miR-637 1 1 1
chr17:39727481|39727751 hsa-miR-657 0 0 1
chr17:39727481|39727751 hsa-miR-660-5p 0 0 1
chr17:39727481|39727751 hsa-miR-660-3p 0 0 1
chr17:39727481|39727751 hsa-miR-892a 0 0 1
chr17:39727481|39727751 hsa-miR-1205 0 0 1
chr17:39727481|39727751 hsa-miR-1252-5p 0 0 1
chr17:39727481|39727751 hsa-miR-1252-3p 0 0 1
chr17:39727481|39727751 hsa-miR-1224-3p 0 1 1
chr17:39727481|39727751 hsa-miR-331-3p 0 0 1
chr17:39727481|39727751 hsa-miR-1207-5p 1 1 1
chr17:39727481|39727751 hsa-miR-324-3p 0 0 1
chr17:39727481|39727751 hsa-miR-1260 0 0 1
chr17:39727481|39727751 hsa-miR-1280 0 0 1
chr17:39727481|39727751 hsa-miR-128 0 0 1
chr17:39727481|39727751 hsa-miR-642 0 0 1
chr17:39727481|39727751 hsa-miR-378 0 0 1
chr17:39727481|39727751 hsa-miR-151-3p 0 0 1
chr17:39727481|39727751 hsa-miR-762 1 1 0
chr17:39727481|39727751 hsa-miR-940 0 1 0
chr17:39727481|39727751 hsa-miR-1260a 0 1 0
chr17:39727481|39727751 hsa-miR-1913 0 1 0
chr17:39727481|39727751 hsa-miR-3154 1 0 0
chr17:39727481|39727751 hsa-miR-3196 1 0 0
chr17:39727481|39727751 hsa-miR-378c 0 1 0
chr17:39727481|39727751 hsa-miR-4257 1 0 0
chr17:39727481|39727751 hsa-miR-3621 1 0 0
chr17:39727481|39727751 hsa-miR-3665 1 0 0
chr17:39727481|39727751 hsa-miR-378e 0 1 0
chr17:39727481|39727751 hsa-miR-378f 0 1 0
chr17:39727481|39727751 hsa-miR-378g 0 1 0
chr17:39727481|39727751 hsa-miR-378h 0 1 0
chr17:39727481|39727751 hsa-miR-4498 1 1 0
chr17:39727481|39727751 hsa-miR-4505 0 1 0
chr17:39727481|39727751 hsa-miR-2392 1 0 0
chr17:39727481|39727751 hsa-miR-4507 1 0 0
chr17:39727481|39727751 hsa-miR-4508 1 0 0
chr17:39727481|39727751 hsa-miR-4515 1 1 0
chr17:39727481|39727751 hsa-miR-1587 1 0 0
chr17:39727481|39727751 hsa-miR-4651 1 0 0
chr17:39727481|39727751 hsa-miR-4656 1 1 0
chr17:39727481|39727751 hsa-miR-4734 1 1 0
chr17:39727481|39727751 hsa-miR-4741 1 0 0
chr17:39727481|39727751 hsa-miR-5787 1 1 0
chr17:39727481|39727751 hsa-miR-6085 1 0 0
chr17:39727481|39727751 hsa-miR-6090 1 0 0
chr17:39727481|39727751 hsa-miR-7702 0 1 0
chr17:39727481|39727751 hsa-miR-8089 1 0 0
chr17:39727481|39727751 hsa-miR-12120 0 1 0
chr17:39727481|39727751 hsa-miR-128-3p 0 1 0
chr17:39727481|39727751 hsa-miR-6749-3p 1 0 0
chr17:39727481|39727751 hsa-miR-92a-1-5p 1 0 0
chr17:39727481|39727751 hsa-miR-128-1-5p 1 1 0
chr17:39727481|39727751 hsa-miR-4731-5p 0 1 0
chr17:39727481|39727751 hsa-miR-4665-3p 1 0 0
chr17:39727481|39727751 hsa-miR-4687-3p 1 0 0
chr17:39727481|39727751 hsa-miR-1225-3p 1 0 0
chr17:39727481|39727751 hsa-miR-6730-5p 0 1 0
chr17:39727481|39727751 hsa-miR-3928-3p 0 1 0
chr17:39727481|39727751 hsa-miR-6727-5p 1 1 0
chr17:39727481|39727751 hsa-miR-6721-5p 0 1 0
chr17:39727481|39727751 hsa-miR-6817-3p 0 1 0
chr17:39727481|39727751 hsa-miR-6783-5p 0 1 0
chr17:39727481|39727751 hsa-miR-3180-3p 1 0 0
chr17:39727481|39727751 hsa-miR-185-3p 1 1 0
chr17:39727481|39727751 hsa-miR-6829-5p 1 1 0
chr17:39727481|39727751 hsa-miR-6732-5p 1 0 0
chr17:39727481|39727751 hsa-miR-6798-5p 1 1 0
chr17:39727481|39727751 hsa-miR-6728-3p 0 1 0
chr17:39727481|39727751 hsa-miR-5006-5p 1 0 0
chr17:39727481|39727751 hsa-miR-6788-3p 1 0 0
chr17:39727481|39727751 hsa-miR-4713-5p 1 0 0
chr17:39727481|39727751 hsa-miR-6835-5p 1 0 0
chr17:39727481|39727751 hsa-miR-939-3p 0 1 0
chr17:39727481|39727751 hsa-miR-7109-5p 1 0 0
chr17:39727481|39727751 hsa-miR-4763-5p 1 0 0
chr17:39727481|39727751 hsa-miR-4783-3p 1 1 0
chr17:39727481|39727751 hsa-miR-6753-5p 1 0 0
chr17:39727481|39727751 hsa-miR-885-3p 1 0 0
chr17:39727481|39727751 hsa-miR-7113-3p 1 0 0
chr17:39727481|39727751 hsa-miR-6771-5p 1 0 0
chr17:39727481|39727751 hsa-miR-4667-3p 1 0 0
chr17:39727481|39727751 hsa-miR-6824-5p 0 1 0
chr17:39727481|39727751 hsa-miR-1306-5p 1 1 0
chr17:39727481|39727751 hsa-miR-6781-5p 1 0 0
chr17:39727481|39727751 hsa-miR-4800-5p 0 1 0
chr17:39727481|39727751 hsa-miR-6743-3p 1 0 0
chr17:39727481|39727751 hsa-miR-6867-3p 0 1 0
chr17:39727481|39727751 hsa-miR-744-5p 1 0 0
chr17:39727481|39727751 hsa-miR-2276-5p 0 1 0
chr17:39727481|39727751 hsa-miR-6752-3p 0 1 0
chr17:39727481|39727751 hsa-miR-6895-3p 0 1 0
chr17:39727481|39727751 hsa-miR-216a-3p 0 1 0
chr17:39727481|39727751 hsa-miR-6773-3p 1 1 0
chr17:39727481|39727751 hsa-miR-4749-3p 1 0 0
chr17:39727481|39727751 hsa-miR-6777-3p 1 1 0
chr17:39727481|39727751 hsa-miR-4766-5p 0 1 0
chr17:39727481|39727751 hsa-miR-3126-3p 0 1 0
chr17:39727481|39727751 hsa-miR-4433a-5p 0 1 0
chr17:39727481|39727751 hsa-miR-4727-5p 1 1 0
chr17:39727481|39727751 hsa-miR-6732-3p 1 0 0
chr17:39727481|39727751 hsa-miR-10400-5p 1 0 0
chr17:39727481|39727751 hsa-miR-4763-3p 1 1 0
chr17:39727481|39727751 hsa-miR-6787-5p 1 0 0
chr17:39727481|39727751 hsa-miR-6775-5p 1 0 0
chr17:39727481|39727751 hsa-miR-1343-5p 1 0 0
chr17:39727481|39727751 hsa-miR-5001-5p 1 0 0
chr17:39727481|39727751 hsa-miR-6726-5p 1 0 0
chr17:39727481|39727751 hsa-miR-6743-5p 1 0 0
chr17:39727481|39727751 hsa-miR-6756-5p 1 0 0
chr17:39727481|39727751 hsa-miR-6803-5p 1 0 0
chr17:39727481|39727751 hsa-miR-6813-5p 1 1 0
chr17:39727481|39727751 hsa-miR-6851-5p 1 0 0
chr17:39727481|39727751 hsa-miR-7107-5p 1 0 0
chr17:39727481|39727751 hsa-miR-6722-3p 1 1 0
chr17:39727481|39727751 hsa-miR-6751-5p 1 0 0
chr17:39727481|39727751 hsa-miR-6879-5p 0 1 0
chr17:39727481|39727751 hsa-miR-3620-5p 1 0 0
chr17:39727481|39727751 hsa-miR-5196-5p 1 1 0
chr17:39727481|39727751 hsa-miR-6836-5p 1 0 0
chr17:39727481|39727751 hsa-miR-10396a-5p 1 0 0
chr17:39727481|39727751 hsa-miR-10526-3p 1 1 0
chr17:39727481|39727751 hsa-miR-1237-5p 1 0 0
chr17:39727481|39727751 hsa-miR-328-5p 1 1 0
chr17:39727481|39727751 hsa-miR-4632-5p 1 1 0
chr17:39727481|39727751 hsa-miR-4649-5p 1 0 0
chr17:39727481|39727751 hsa-miR-4725-3p 1 1 0
chr17:39727481|39727751 hsa-miR-6729-5p 1 1 0
chr17:39727481|39727751 hsa-miR-6735-5p 0 1 0
chr17:39727481|39727751 hsa-miR-6738-5p 1 0 0
chr17:39727481|39727751 hsa-miR-6794-5p 1 0 0
chr17:39727481|39727751 hsa-miR-6795-5p 1 0 0
chr17:39727481|39727751 hsa-miR-6846-5p 1 1 0
chr17:39727481|39727751 hsa-miR-6848-5p 1 1 0
chr17:39727481|39727751 hsa-miR-4697-5p 1 0 0
chr17:39727481|39727751 hsa-miR-6885-5p 1 1 0
chr17:39727481|39727751 hsa-miR-939-5p 1 0 0
chr17:39727481|39727751 hsa-miR-6511b-5p 1 0 0
chr17:39727481|39727751 hsa-miR-10396a-3p 1 0 0
chr17:39727481|39727751 hsa-miR-10396b-3p 1 0 0
chr17:39727481|39727751 hsa-miR-3940-5p 1 0 0
chr17:39727481|39727751 hsa-miR-4747-5p 1 1 0
chr17:39727481|39727751 hsa-miR-378a-3p 0 1 0
chr17:39727481|39727751 hsa-miR-6727-3p 1 1 0
chr17:39727481|39727751 hsa-miR-6801-3p 0 1 0
chr17:39727481|39727751 hsa-miR-6805-3p 1 0 0
chr17:39727481|39727751 hsa-miR-6810-3p 0 1 0
chr17:39727481|39727751 hsa-miR-10400-3p 1 0 0
chr17:39727481|39727751 hsa-miR-6775-3p 1 0 0
chr17:39727481|39727751 hsa-miR-3059-5p 0 1 0
chr17:39727481|39727751 hsa-miR-10394-5p 1 1 0
chr17:39727481|39727751 hsa-miR-128-2-5p 0 1 0
chr17:39727481|39727751 hsa-miR-4769-3p 1 1 0
chr17:39727481|39727751 hsa-miR-378d 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:39727481|39727751
ORF Type ORF1
Protein Length 86
Nucleotide Length 258
Protein Sequence MPSETDGYVAPLTCSPQPGMESSLSRETDGQGRWDLQPRVHCGGRGSGRDTGVPSPNGSPSLDLSEYVNQPDVRPQPPSPREGPLP
Nucleotide Sequence CTGCCCTCTGAGACTGATGGCTACGTTGCCCCCCTGACCTGCAGCCCCCAGCCTGGTATGGAGTCCAGTCTAAGCAGAGAGACTGATGGGCAGGGGAGGTGGGACCTTCAGCCCAGGGTCCACTGTGGGGGCAGAGGGAGTGGCAGAGACACCGGGGTTCCTTCCCCTAATGGGTCACCTTCTCTTGACCTTTCAGAATATGTGAACCAGCCAGATGTTCGGCCCCAGCCCCCTTCGCCCCGAGAGGGCCCTCTGCCT
CircID chr17:39727481|39727751
ORF Type ORF2
Protein Length 40
Nucleotide Length 123
Protein Sequence MMGRGGGTFSPGSTVGAEGVAETPGFLPLMGHLLLTFQNM
Nucleotide Sequence CTGATGGGCAGGGGAGGTGGGACCTTCAGCCCAGGGTCCACTGTGGGGGCAGAGGGAGTGGCAGAGACACCGGGGTTCCTTCCCCTAATGGGTCACCTTCTCTTGACCTTTCAGAATATGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab