CircRNA Information

General Information
circRNA Basic Information
CircID chr17:39984401|39986657
Strand -
CircType exon
Host Gene ENSG00000108344.13;
Algorism CIRI2;
Sequence CACTATGTTCTGTATAAGGCTGTGCAGGGCTTCTTCACTTCAAATAATGCCACTCGAGACTTTTTGCTCCCCTTCCTGGAAGAGCCCATGGACACAGAGGCTGATTTACAGTTCCGTCCCCGCACGGGAAAAGCTGCGTCGACACCCCTCCTGCCTGAAGTGGAAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:39984401|39986657 hsa-miR-184 0 1 1
chr17:39984401|39986657 hsa-miR-573 0 0 1
chr17:39984401|39986657 hsa-miR-744-5p 0 0 1
chr17:39984401|39986657 hsa-miR-744-3p 0 0 1
chr17:39984401|39986657 hsa-miR-665 0 0 1
chr17:39984401|39986657 hsa-miR-939-5p 0 0 1
chr17:39984401|39986657 hsa-miR-939-3p 0 0 1
chr17:39984401|39986657 hsa-miR-940 0 0 1
chr17:39984401|39986657 hsa-miR-1236-5p 0 0 1
chr17:39984401|39986657 hsa-miR-1236-3p 0 0 1
chr17:39984401|39986657 hsa-miR-1256 0 0 1
chr17:39984401|39986657 hsa-miR-548p 0 0 1
chr17:39984401|39986657 hsa-miR-516a-5p 0 0 1
chr17:39984401|39986657 hsa-miR-608 1 0 0
chr17:39984401|39986657 hsa-miR-3154 1 0 0
chr17:39984401|39986657 hsa-miR-2392 1 0 0
chr17:39984401|39986657 hsa-miR-4514 1 0 0
chr17:39984401|39986657 hsa-miR-4669 1 0 0
chr17:39984401|39986657 hsa-miR-4706 1 0 0
chr17:39984401|39986657 hsa-miR-4739 1 0 0
chr17:39984401|39986657 hsa-miR-5698 1 0 0
chr17:39984401|39986657 hsa-miR-5787 1 0 0
chr17:39984401|39986657 hsa-miR-6081 1 0 0
chr17:39984401|39986657 hsa-miR-6090 1 0 0
chr17:39984401|39986657 hsa-miR-6165 1 0 0
chr17:39984401|39986657 hsa-miR-12115 1 0 0
chr17:39984401|39986657 hsa-miR-4433b-3p 1 0 0
chr17:39984401|39986657 hsa-miR-6734-5p 1 0 0
chr17:39984401|39986657 hsa-miR-4433a-3p 1 0 0
chr17:39984401|39986657 hsa-miR-7106-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6825-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6510-5p 1 0 0
chr17:39984401|39986657 hsa-miR-4695-5p 1 0 0
chr17:39984401|39986657 hsa-miR-4722-5p 1 0 0
chr17:39984401|39986657 hsa-miR-3677-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6716-5p 1 0 0
chr17:39984401|39986657 hsa-miR-3180-3p 1 0 0
chr17:39984401|39986657 hsa-miR-6827-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6798-5p 1 0 0
chr17:39984401|39986657 hsa-miR-885-3p 1 0 0
chr17:39984401|39986657 hsa-miR-1908-5p 1 0 0
chr17:39984401|39986657 hsa-miR-92b-5p 1 0 0
chr17:39984401|39986657 hsa-miR-4787-5p 1 0 0
chr17:39984401|39986657 hsa-miR-149-3p 1 0 0
chr17:39984401|39986657 hsa-miR-7843-3p 0 1 0
chr17:39984401|39986657 hsa-miR-6828-5p 1 0 0
chr17:39984401|39986657 hsa-miR-7112-5p 1 0 0
chr17:39984401|39986657 hsa-miR-423-5p 1 0 0
chr17:39984401|39986657 hsa-miR-1207-5p 1 0 0
chr17:39984401|39986657 hsa-miR-4763-3p 1 0 0
chr17:39984401|39986657 hsa-miR-6787-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6893-5p 1 1 0
chr17:39984401|39986657 hsa-miR-1343-5p 1 0 0
chr17:39984401|39986657 hsa-miR-5001-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6726-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6737-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6743-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6752-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6756-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6803-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6722-3p 1 0 0
chr17:39984401|39986657 hsa-miR-6779-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6780a-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6797-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6808-5p 1 1 0
chr17:39984401|39986657 hsa-miR-7111-5p 1 0 0
chr17:39984401|39986657 hsa-miR-4728-5p 1 0 0
chr17:39984401|39986657 hsa-miR-5196-5p 1 0 0
chr17:39984401|39986657 hsa-miR-10526-3p 1 0 0
chr17:39984401|39986657 hsa-miR-1909-3p 1 0 0
chr17:39984401|39986657 hsa-miR-328-5p 1 0 0
chr17:39984401|39986657 hsa-miR-4632-5p 1 0 0
chr17:39984401|39986657 hsa-miR-4745-5p 1 0 0
chr17:39984401|39986657 hsa-miR-4749-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6883-5p 1 0 0
chr17:39984401|39986657 hsa-miR-4723-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6885-5p 1 0 0
chr17:39984401|39986657 hsa-miR-1238-5p 1 0 0
chr17:39984401|39986657 hsa-miR-4758-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6511b-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6799-3p 0 1 0
chr17:39984401|39986657 hsa-miR-6877-3p 0 1 0
chr17:39984401|39986657 hsa-miR-4747-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6876-5p 0 1 0
chr17:39984401|39986657 hsa-miR-6891-5p 1 0 0
chr17:39984401|39986657 hsa-miR-6785-5p 1 0 0
chr17:39984401|39986657 hsa-miR-10400-3p 0 1 0
chr17:39984401|39986657 hsa-miR-6819-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:39984401|39986657
ORF Type ORF1
Protein Length 52
Nucleotide Length 156
Protein Sequence MYKAVQGFFTSNNATRDFLLPFLEEPMDTEADLQFRPRTGKAASTPLLPEVE
Nucleotide Sequence CTGTATAAGGCTGTGCAGGGCTTCTTCACTTCAAATAATGCCACTCGAGACTTTTTGCTCCCCTTCCTGGAAGAGCCCATGGACACAGAGGCTGATTTACAGTTCCGTCCCCGCACGGGAAAAGCTGCGTCGACACCCCTCCTGCCTGAAGTGGAA
CircID chr17:39984401|39986657
ORF Type ORF2
Protein Length 54
Nucleotide Length 162
Protein Sequence MFCIRLCRASSLQIMPLETFCSPSWKSPWTQRLIYSSVPAREKLRRHPSCLKWK
Nucleotide Sequence ATGTTCTGTATAAGGCTGTGCAGGGCTTCTTCACTTCAAATAATGCCACTCGAGACTTTTTGCTCCCCTTCCTGGAAGAGCCCATGGACACAGAGGCTGATTTACAGTTCCGTCCCCGCACGGGAAAAGCTGCGTCGACACCCCTCCTGCCTGAAGTGGAAG
CircID chr17:39984401|39986657
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MGSSRKGSKKSRVALFEVKKPCTALYRT
Nucleotide Sequence ATGGGCTCTTCCAGGAAGGGGAGCAAAAAGTCTCGAGTGGCATTATTTGAAGTGAAGAAGCCCTGCACAGCCTTATACAGAACATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab