CircRNA Information

General Information
circRNA Basic Information
CircID chr17:40161753|40162032
Strand +
CircType exon
Host Gene ENSG00000108349.13;
Algorism CIRI2;
Sequence CCACTTTGTTCTCCACAGGCTCTGTGCTCTCCTGTCCGTCCCCACTTTGCCTCTCTCCAGTCACAGTGCTTTTGGTGTCAGGCTTTTCTTCTCCCTTCTCTTCTTTTGTTGAAGAATTAACAGCATCATTAGCTTCTGATTTCAGCTCCACTTTGGAGTTTTCCTCTTCACTGTATTCACCTTCTTCACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:40161753|40162032 hsa-miR-134-5p 0 0 1
chr17:40161753|40162032 hsa-miR-134-3p 0 0 1
chr17:40161753|40162032 hsa-miR-184 0 0 1
chr17:40161753|40162032 hsa-miR-185-5p 0 0 1
chr17:40161753|40162032 hsa-miR-185-3p 0 0 1
chr17:40161753|40162032 hsa-miR-520g-5p 0 0 1
chr17:40161753|40162032 hsa-miR-520g-3p 0 0 1
chr17:40161753|40162032 hsa-miR-520h 0 0 1
chr17:40161753|40162032 hsa-miR-569 0 0 1
chr17:40161753|40162032 hsa-miR-421 0 0 1
chr17:40161753|40162032 hsa-miR-1253 1 1 1
chr17:40161753|40162032 hsa-miR-1322 0 1 1
chr17:40161753|40162032 hsa-miR-491-5p 0 0 1
chr17:40161753|40162032 hsa-miR-650 1 0 0
chr17:40161753|40162032 hsa-miR-1270 1 0 0
chr17:40161753|40162032 hsa-miR-1276 1 0 0
chr17:40161753|40162032 hsa-miR-1321 1 0 0
chr17:40161753|40162032 hsa-miR-2861 1 0 0
chr17:40161753|40162032 hsa-miR-3125 0 1 0
chr17:40161753|40162032 hsa-miR-3132 1 0 0
chr17:40161753|40162032 hsa-miR-3154 1 1 0
chr17:40161753|40162032 hsa-miR-3175 1 0 0
chr17:40161753|40162032 hsa-miR-3185 0 1 0
chr17:40161753|40162032 hsa-miR-3196 1 0 0
chr17:40161753|40162032 hsa-miR-3197 1 0 0
chr17:40161753|40162032 hsa-miR-4306 1 0 0
chr17:40161753|40162032 hsa-miR-3612 1 0 0
chr17:40161753|40162032 hsa-miR-3652 1 0 0
chr17:40161753|40162032 hsa-miR-3660 1 0 0
chr17:40161753|40162032 hsa-miR-3945 1 0 0
chr17:40161753|40162032 hsa-miR-4430 1 0 0
chr17:40161753|40162032 hsa-miR-3135b 1 1 0
chr17:40161753|40162032 hsa-miR-4470 1 0 0
chr17:40161753|40162032 hsa-miR-4488 1 0 0
chr17:40161753|40162032 hsa-miR-4510 1 0 0
chr17:40161753|40162032 hsa-miR-4516 1 0 0
chr17:40161753|40162032 hsa-miR-4533 1 0 0
chr17:40161753|40162032 hsa-miR-548an 0 1 0
chr17:40161753|40162032 hsa-miR-4644 1 1 0
chr17:40161753|40162032 hsa-miR-4688 1 0 0
chr17:40161753|40162032 hsa-miR-4689 1 0 0
chr17:40161753|40162032 hsa-miR-4710 1 0 0
chr17:40161753|40162032 hsa-miR-4739 1 1 0
chr17:40161753|40162032 hsa-miR-4779 1 1 0
chr17:40161753|40162032 hsa-miR-5190 1 0 0
chr17:40161753|40162032 hsa-miR-5191 1 0 0
chr17:40161753|40162032 hsa-miR-5192 1 0 0
chr17:40161753|40162032 hsa-miR-5739 1 0 0
chr17:40161753|40162032 hsa-miR-6085 1 0 0
chr17:40161753|40162032 hsa-miR-6127 1 0 0
chr17:40161753|40162032 hsa-miR-6133 1 0 0
chr17:40161753|40162032 hsa-miR-6860 1 0 0
chr17:40161753|40162032 hsa-miR-8077 1 0 0
chr17:40161753|40162032 hsa-miR-8085 1 0 0
chr17:40161753|40162032 hsa-miR-8089 1 1 0
chr17:40161753|40162032 hsa-miR-12115 1 1 0
chr17:40161753|40162032 hsa-miR-12117 0 1 0
chr17:40161753|40162032 hsa-miR-6734-5p 1 0 0
chr17:40161753|40162032 hsa-miR-3150a-3p 1 0 0
chr17:40161753|40162032 hsa-miR-6861-5p 1 0 0
chr17:40161753|40162032 hsa-miR-7106-5p 1 1 0
chr17:40161753|40162032 hsa-miR-6857-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6728-5p 1 0 0
chr17:40161753|40162032 hsa-miR-139-3p 1 0 0
chr17:40161753|40162032 hsa-miR-3622a-5p 1 0 0
chr17:40161753|40162032 hsa-miR-4768-3p 0 1 0
chr17:40161753|40162032 hsa-miR-7114-5p 1 1 0
chr17:40161753|40162032 hsa-miR-6757-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6873-5p 1 0 0
chr17:40161753|40162032 hsa-miR-7847-3p 0 1 0
chr17:40161753|40162032 hsa-miR-4695-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6746-5p 1 0 0
chr17:40161753|40162032 hsa-miR-4709-3p 0 1 0
chr17:40161753|40162032 hsa-miR-4722-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6820-5p 1 0 0
chr17:40161753|40162032 hsa-miR-4474-3p 1 0 0
chr17:40161753|40162032 hsa-miR-4655-5p 1 0 0
chr17:40161753|40162032 hsa-miR-197-5p 1 0 0
chr17:40161753|40162032 hsa-miR-7845-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6783-5p 0 1 0
chr17:40161753|40162032 hsa-miR-7108-5p 1 0 0
chr17:40161753|40162032 hsa-miR-3605-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6716-5p 1 0 0
chr17:40161753|40162032 hsa-miR-3151-5p 1 0 0
chr17:40161753|40162032 hsa-miR-3180-3p 1 0 0
chr17:40161753|40162032 hsa-miR-6805-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6827-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6770-5p 1 0 0
chr17:40161753|40162032 hsa-miR-3126-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6760-5p 0 1 0
chr17:40161753|40162032 hsa-miR-2467-3p 1 0 0
chr17:40161753|40162032 hsa-miR-6874-5p 1 1 0
chr17:40161753|40162032 hsa-miR-6810-5p 1 1 0
chr17:40161753|40162032 hsa-miR-6786-5p 1 0 0
chr17:40161753|40162032 hsa-miR-5088-5p 1 0 0
chr17:40161753|40162032 hsa-miR-1226-5p 1 0 0
chr17:40161753|40162032 hsa-miR-204-3p 1 0 0
chr17:40161753|40162032 hsa-miR-92b-5p 1 1 0
chr17:40161753|40162032 hsa-miR-4732-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6749-5p 1 0 0
chr17:40161753|40162032 hsa-miR-3202 1 1 0
chr17:40161753|40162032 hsa-miR-3160-3p 0 1 0
chr17:40161753|40162032 hsa-miR-149-3p 1 0 0
chr17:40161753|40162032 hsa-miR-6717-5p 1 0 0
chr17:40161753|40162032 hsa-miR-202-3p 1 0 0
chr17:40161753|40162032 hsa-miR-6789-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6828-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6781-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6878-5p 0 1 0
chr17:40161753|40162032 hsa-miR-5010-5p 1 0 0
chr17:40161753|40162032 hsa-miR-7112-5p 1 0 0
chr17:40161753|40162032 hsa-miR-664b-5p 1 0 0
chr17:40161753|40162032 hsa-miR-3678-3p 1 0 0
chr17:40161753|40162032 hsa-miR-423-5p 1 1 0
chr17:40161753|40162032 hsa-miR-3191-3p 1 1 0
chr17:40161753|40162032 hsa-miR-1225-5p 1 0 0
chr17:40161753|40162032 hsa-miR-4742-5p 1 0 0
chr17:40161753|40162032 hsa-miR-519d-5p 0 1 0
chr17:40161753|40162032 hsa-miR-6832-5p 1 0 0
chr17:40161753|40162032 hsa-miR-5197-3p 0 1 0
chr17:40161753|40162032 hsa-miR-7159-5p 0 1 0
chr17:40161753|40162032 hsa-miR-1207-5p 1 0 0
chr17:40161753|40162032 hsa-miR-1233-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6778-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6812-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6816-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6870-5p 1 0 0
chr17:40161753|40162032 hsa-miR-1343-5p 1 0 0
chr17:40161753|40162032 hsa-miR-5001-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6743-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6754-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6769a-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6851-5p 1 0 0
chr17:40161753|40162032 hsa-miR-1249-5p 1 1 0
chr17:40161753|40162032 hsa-miR-6763-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6797-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6879-5p 1 0 0
chr17:40161753|40162032 hsa-miR-7111-5p 1 0 0
chr17:40161753|40162032 hsa-miR-5196-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6780b-5p 1 0 0
chr17:40161753|40162032 hsa-miR-1237-5p 1 0 0
chr17:40161753|40162032 hsa-miR-4649-5p 1 0 0
chr17:40161753|40162032 hsa-miR-4745-5p 1 0 0
chr17:40161753|40162032 hsa-miR-4749-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6729-5p 1 0 0
chr17:40161753|40162032 hsa-miR-675-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6795-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6846-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6848-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6858-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6887-5p 1 0 0
chr17:40161753|40162032 hsa-miR-939-5p 1 1 0
chr17:40161753|40162032 hsa-miR-4758-5p 1 0 0
chr17:40161753|40162032 hsa-miR-1910-3p 1 0 0
chr17:40161753|40162032 hsa-miR-6511a-5p 1 1 0
chr17:40161753|40162032 hsa-miR-6731-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6758-5p 1 1 0
chr17:40161753|40162032 hsa-miR-6856-5p 1 1 0
chr17:40161753|40162032 hsa-miR-4700-5p 1 0 0
chr17:40161753|40162032 hsa-miR-4646-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6891-5p 1 0 0
chr17:40161753|40162032 hsa-miR-4716-3p 1 1 0
chr17:40161753|40162032 hsa-miR-541-3p 1 0 0
chr17:40161753|40162032 hsa-miR-4667-5p 1 0 0
chr17:40161753|40162032 hsa-miR-3184-5p 1 0 0
chr17:40161753|40162032 hsa-miR-6884-5p 1 0 0
chr17:40161753|40162032 hsa-miR-383-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:40161753|40162032
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MCSPVRPHFASLQSQCFWCQAFLLPSLLLLKN
Nucleotide Sequence CTGTGCTCTCCTGTCCGTCCCCACTTTGCCTCTCTCCAGTCACAGTGCTTTTGGTGTCAGGCTTTTCTTCTCCCTTCTCTTCTTTTGTTGAAGAATTAA
CircID chr17:40161753|40162032
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MSVPTLPLSSHSAFGVRLFFSLLFFC
Nucleotide Sequence CTGTCCGTCCCCACTTTGCCTCTCTCCAGTCACAGTGCTTTTGGTGTCAGGCTTTTCTTCTCCCTTCTCTTCTTTTGTTGA
CircID chr17:40161753|40162032
ORF Type ORF3
Protein Length 61
Nucleotide Length 183
Protein Sequence MFSTGSVLSCPSPLCLSPVTVLLVSGFSSPFSSFVEELTASLASDFSSTLEFSSSLYSPSS
Nucleotide Sequence TTGTTCTCCACAGGCTCTGTGCTCTCCTGTCCGTCCCCACTTTGCCTCTCTCCAGTCACAGTGCTTTTGGTGTCAGGCTTTTCTTCTCCCTTCTCTTCTTTTGTTGAAGAATTAACAGCATCATTAGCTTCTGATTTCAGCTCCACTTTGGAGTTTTCCTCTTCACTGTATTCACCTTCTTCA
CircID chr17:40161753|40162032
ORF Type ORF4
Protein Length 48
Nucleotide Length 144
Protein Sequence MKSEANDAVNSSTKEEKGEEKPDTKSTVTGERQSGDGQESTEPVENKV
Nucleotide Sequence CTGAAATCAGAAGCTAATGATGCTGTTAATTCTTCAACAAAAGAAGAGAAGGGAGAAGAAAAGCCTGACACCAAAAGCACTGTGACTGGAGAGAGGCAAAGTGGGGACGGACAGGAGAGCACAGAGCCTGTGGAGAACAAAGTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab