CircRNA Information

General Information
circRNA Basic Information
CircID chr17:40364390|40364684
Strand -
CircType exon
Host Gene ENSG00000266208.1;
Algorism CIRI2;
Sequence AGAGGCAACTCCGCTTTCATAACTCTCACAGGGTCCTTTGTCGGAGGTGTCCCTGCCCTCCTACCCCAGCGTGGTGGGAGTGCGACGCCAGGCTTCTCCCTCCTCCCTGGCCTCCTGTGCCTCCAGCCTCCACATCTCCTGAGATCCTCCCCACCCCACACTTACACAGGTCCCCACACGCCCCTGGTGCCCCTAAACCGCCACCCAACCCCACTCACCCTGGGGCCGGGACTGGGGTGTCAGAGCTGAGCCAGGGACCTTGGGAGGTGGCTGGGACCGGCGCCTCCTGCTCCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:40364390|40364684 hsa-miR-10a-5p 0 0 1
chr17:40364390|40364684 hsa-miR-10a-3p 0 0 1
chr17:40364390|40364684 hsa-miR-10b-5p 0 0 1
chr17:40364390|40364684 hsa-miR-10b-3p 0 0 1
chr17:40364390|40364684 hsa-miR-149-5p 0 0 1
chr17:40364390|40364684 hsa-miR-149-3p 0 0 1
chr17:40364390|40364684 hsa-miR-150-5p 0 0 1
chr17:40364390|40364684 hsa-miR-150-3p 0 0 1
chr17:40364390|40364684 hsa-miR-492 0 0 1
chr17:40364390|40364684 hsa-miR-504-5p 0 0 1
chr17:40364390|40364684 hsa-miR-504-3p 0 0 1
chr17:40364390|40364684 hsa-miR-595 0 0 1
chr17:40364390|40364684 hsa-miR-608 1 0 1
chr17:40364390|40364684 hsa-miR-650 1 0 1
chr17:40364390|40364684 hsa-miR-765 1 0 1
chr17:40364390|40364684 hsa-miR-939-5p 0 0 1
chr17:40364390|40364684 hsa-miR-939-3p 0 0 1
chr17:40364390|40364684 hsa-miR-1293 1 0 1
chr17:40364390|40364684 hsa-miR-1262 0 0 1
chr17:40364390|40364684 hsa-miR-1266-5p 0 0 1
chr17:40364390|40364684 hsa-miR-1266-3p 0 0 1
chr17:40364390|40364684 hsa-miR-1321 0 0 1
chr17:40364390|40364684 hsa-miR-491-5p 1 0 1
chr17:40364390|40364684 hsa-miR-532-3p 0 0 1
chr17:40364390|40364684 hsa-miR-485-5p 0 0 1
chr17:40364390|40364684 hsa-miR-1224-3p 0 0 1
chr17:40364390|40364684 hsa-miR-576-3p 0 0 1
chr17:40364390|40364684 hsa-miR-1207-5p 1 0 1
chr17:40364390|40364684 hsa-miR-342-5p 0 0 1
chr17:40364390|40364684 hsa-miR-1260 0 0 1
chr17:40364390|40364684 hsa-miR-1280 0 0 1
chr17:40364390|40364684 hsa-miR-1268 0 0 1
chr17:40364390|40364684 hsa-miR-24 0 0 1
chr17:40364390|40364684 hsa-miR-637 1 0 0
chr17:40364390|40364684 hsa-miR-638 1 0 0
chr17:40364390|40364684 hsa-miR-663a 1 0 0
chr17:40364390|40364684 hsa-miR-762 1 0 0
chr17:40364390|40364684 hsa-miR-665 1 0 0
chr17:40364390|40364684 hsa-miR-920 1 0 0
chr17:40364390|40364684 hsa-miR-1182 1 0 0
chr17:40364390|40364684 hsa-miR-1268a 1 0 0
chr17:40364390|40364684 hsa-miR-1276 1 0 0
chr17:40364390|40364684 hsa-miR-2861 1 0 0
chr17:40364390|40364684 hsa-miR-3141 1 0 0
chr17:40364390|40364684 hsa-miR-3147 1 0 0
chr17:40364390|40364684 hsa-miR-3175 1 0 0
chr17:40364390|40364684 hsa-miR-3193 1 0 0
chr17:40364390|40364684 hsa-miR-3196 1 0 0
chr17:40364390|40364684 hsa-miR-3197 1 0 0
chr17:40364390|40364684 hsa-miR-4259 1 0 0
chr17:40364390|40364684 hsa-miR-4266 1 0 0
chr17:40364390|40364684 hsa-miR-4269 1 0 0
chr17:40364390|40364684 hsa-miR-4271 1 0 0
chr17:40364390|40364684 hsa-miR-3649 1 0 0
chr17:40364390|40364684 hsa-miR-3652 1 0 0
chr17:40364390|40364684 hsa-miR-3911 1 0 0
chr17:40364390|40364684 hsa-miR-3937 1 0 0
chr17:40364390|40364684 hsa-miR-1268b 1 0 0
chr17:40364390|40364684 hsa-miR-4481 1 0 0
chr17:40364390|40364684 hsa-miR-4507 1 0 0
chr17:40364390|40364684 hsa-miR-4518 1 0 0
chr17:40364390|40364684 hsa-miR-4525 1 0 0
chr17:40364390|40364684 hsa-miR-4533 1 0 0
chr17:40364390|40364684 hsa-miR-1587 1 0 0
chr17:40364390|40364684 hsa-miR-4651 1 0 0
chr17:40364390|40364684 hsa-miR-4654 1 0 0
chr17:40364390|40364684 hsa-miR-4657 1 0 0
chr17:40364390|40364684 hsa-miR-4658 1 0 0
chr17:40364390|40364684 hsa-miR-4688 1 0 0
chr17:40364390|40364684 hsa-miR-4689 1 0 0
chr17:40364390|40364684 hsa-miR-4706 1 0 0
chr17:40364390|40364684 hsa-miR-4739 1 0 0
chr17:40364390|40364684 hsa-miR-4754 1 0 0
chr17:40364390|40364684 hsa-miR-4784 1 0 0
chr17:40364390|40364684 hsa-miR-5192 1 0 0
chr17:40364390|40364684 hsa-miR-5194 1 0 0
chr17:40364390|40364684 hsa-miR-5572 1 0 0
chr17:40364390|40364684 hsa-miR-5705 1 0 0
chr17:40364390|40364684 hsa-miR-5787 1 0 0
chr17:40364390|40364684 hsa-miR-6081 1 0 0
chr17:40364390|40364684 hsa-miR-6085 1 0 0
chr17:40364390|40364684 hsa-miR-6086 1 0 0
chr17:40364390|40364684 hsa-miR-6088 1 0 0
chr17:40364390|40364684 hsa-miR-6127 1 0 0
chr17:40364390|40364684 hsa-miR-6165 1 0 0
chr17:40364390|40364684 hsa-miR-7704 1 0 0
chr17:40364390|40364684 hsa-miR-8089 1 0 0
chr17:40364390|40364684 hsa-miR-12114 1 0 0
chr17:40364390|40364684 hsa-miR-4433b-3p 1 0 0
chr17:40364390|40364684 hsa-miR-92a-2-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6734-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4731-5p 1 0 0
chr17:40364390|40364684 hsa-miR-510-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6747-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4433a-3p 1 0 0
chr17:40364390|40364684 hsa-miR-3150a-3p 1 0 0
chr17:40364390|40364684 hsa-miR-7106-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6825-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6894-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6857-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6799-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6728-5p 1 0 0
chr17:40364390|40364684 hsa-miR-766-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6804-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6833-5p 1 0 0
chr17:40364390|40364684 hsa-miR-3622a-5p 1 0 0
chr17:40364390|40364684 hsa-miR-5187-5p 1 0 0
chr17:40364390|40364684 hsa-miR-3934-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4768-3p 1 0 0
chr17:40364390|40364684 hsa-miR-7114-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6089 1 0 0
chr17:40364390|40364684 hsa-miR-6880-5p 1 0 0
chr17:40364390|40364684 hsa-miR-7847-3p 1 0 0
chr17:40364390|40364684 hsa-miR-4695-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6746-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4722-5p 1 0 0
chr17:40364390|40364684 hsa-miR-874-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6727-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6759-5p 1 0 0
chr17:40364390|40364684 hsa-miR-197-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6742-5p 1 0 0
chr17:40364390|40364684 hsa-miR-3605-5p 1 0 0
chr17:40364390|40364684 hsa-miR-3151-5p 1 0 0
chr17:40364390|40364684 hsa-miR-3180-3p 1 0 0
chr17:40364390|40364684 hsa-miR-6748-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6796-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6805-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6798-5p 1 0 0
chr17:40364390|40364684 hsa-miR-3126-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6782-5p 1 0 0
chr17:40364390|40364684 hsa-miR-3150b-3p 1 0 0
chr17:40364390|40364684 hsa-miR-6810-5p 1 0 0
chr17:40364390|40364684 hsa-miR-5006-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6786-5p 1 0 0
chr17:40364390|40364684 hsa-miR-7109-5p 1 0 0
chr17:40364390|40364684 hsa-miR-1226-5p 1 0 0
chr17:40364390|40364684 hsa-miR-1229-5p 1 0 0
chr17:40364390|40364684 hsa-miR-193b-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4640-5p 1 0 0
chr17:40364390|40364684 hsa-miR-885-3p 1 0 0
chr17:40364390|40364684 hsa-miR-1908-5p 1 0 0
chr17:40364390|40364684 hsa-miR-1228-5p 1 0 0
chr17:40364390|40364684 hsa-miR-296-3p 1 0 0
chr17:40364390|40364684 hsa-miR-6771-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6823-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6749-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6847-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6717-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6824-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6789-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6781-5p 1 0 0
chr17:40364390|40364684 hsa-miR-574-5p 1 0 0
chr17:40364390|40364684 hsa-miR-2116-5p 1 0 0
chr17:40364390|40364684 hsa-miR-10400-5p 1 0 0
chr17:40364390|40364684 hsa-miR-1233-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4763-3p 1 0 0
chr17:40364390|40364684 hsa-miR-6769b-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6778-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6787-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6812-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6816-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6870-5p 1 0 0
chr17:40364390|40364684 hsa-miR-1343-5p 1 0 0
chr17:40364390|40364684 hsa-miR-3180 1 0 0
chr17:40364390|40364684 hsa-miR-5001-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6726-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6737-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6743-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6752-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6756-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6769a-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6803-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6813-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6819-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6842-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6851-5p 1 0 0
chr17:40364390|40364684 hsa-miR-7110-5p 1 0 0
chr17:40364390|40364684 hsa-miR-10401-5p 1 0 0
chr17:40364390|40364684 hsa-miR-11181-3p 1 0 0
chr17:40364390|40364684 hsa-miR-1249-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6722-3p 1 0 0
chr17:40364390|40364684 hsa-miR-6751-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6763-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6779-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6780a-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6808-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6879-5p 1 0 0
chr17:40364390|40364684 hsa-miR-7111-5p 1 0 0
chr17:40364390|40364684 hsa-miR-1915-3p 1 0 0
chr17:40364390|40364684 hsa-miR-3620-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4728-5p 1 0 0
chr17:40364390|40364684 hsa-miR-5196-5p 1 0 0
chr17:40364390|40364684 hsa-miR-10526-3p 1 0 0
chr17:40364390|40364684 hsa-miR-1237-5p 1 0 0
chr17:40364390|40364684 hsa-miR-328-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4649-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4685-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4726-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4745-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6735-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6738-5p 1 0 0
chr17:40364390|40364684 hsa-miR-675-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6794-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6795-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6846-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6848-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6858-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6883-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6887-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4723-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6831-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6885-5p 1 0 0
chr17:40364390|40364684 hsa-miR-1238-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4758-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4769-5p 1 0 0
chr17:40364390|40364684 hsa-miR-365a-5p 1 0 0
chr17:40364390|40364684 hsa-miR-3940-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6736-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6855-5p 1 0 0
chr17:40364390|40364684 hsa-miR-3679-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4747-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4472 1 0 0
chr17:40364390|40364684 hsa-miR-6766-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6785-5p 1 0 0
chr17:40364390|40364684 hsa-miR-4667-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6790-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6791-5p 1 0 0
chr17:40364390|40364684 hsa-miR-6762-5p 1 0 0
chr17:40364390|40364684 hsa-miR-769-3p 1 0 0
chr17:40364390|40364684 hsa-miR-9851-3p 1 0 0
chr17:40364390|40364684 hsa-miR-4756-5p 1 0 0
chr17:40364390|40364684 hsa-miR-3619-5p 1 0 0
chr17:40364390|40364684 hsa-miR-514b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:40364390|40364684
ORF Type ORF1
Protein Length 44
Nucleotide Length 135
Protein Sequence MCLQPPHLLRSSPPHTYTGPHTPLVPLNRHPTPLTLGPGLGCQS
Nucleotide Sequence CTGTGCCTCCAGCCTCCACATCTCCTGAGATCCTCCCCACCCCACACTTACACAGGTCCCCACACGCCCCTGGTGCCCCTAAACCGCCACCCAACCCCACTCACCCTGGGGCCGGGACTGGGGTGTCAGAGCTGA
CircID chr17:40364390|40364684
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MSEVSLPSYPSVVGVRRQASPSSLASCASSLHIS
Nucleotide Sequence TTGTCGGAGGTGTCCCTGCCCTCCTACCCCAGCGTGGTGGGAGTGCGACGCCAGGCTTCTCCCTCCTCCCTGGCCTCCTGTGCCTCCAGCCTCCACATCTCCTGA
CircID chr17:40364390|40364684
ORF Type ORF3
Protein Length 60
Nucleotide Length 183
Protein Sequence MGGGLGAPGACGDLCKCGVGRISGDVEAGGTGGQGGGRSLASHSHHAGVGGQGHLRQRTL
Nucleotide Sequence TTGGGTGGCGGTTTAGGGGCACCAGGGGCGTGTGGGGACCTGTGTAAGTGTGGGGTGGGGAGGATCTCAGGAGATGTGGAGGCTGGAGGCACAGGAGGCCAGGGAGGAGGGAGAAGCCTGGCGTCGCACTCCCACCACGCTGGGGTAGGAGGGCAGGGACACCTCCGACAAAGGACCCTGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab