CircNet

General Information

circRNA Basic Information

CircID	chr17:40406584\|40406917
Strand	-
CircType	exon
Host Gene	ENSG00000131747.13;
Algorism	CIRI2;
Sequence	CTTTGTAATATTTGACTTTCCATTTTTTATGATTTGGAGTAGAACTCTTCCACTCTTCAAATTCAGGAAGGCTGTAAAATGCCATTTCTTGCTTGTTTTTAGATACCTGTGATAAAAAACAATGACTGTGGCTTTGTACACTGTGGGGTCCCCTGTATACCACTACATGTGACGGGGCTTATATGTATATCCAGGTTTGAGGAGTAGGGTCTTAAAATATCCATGATGGTACTTAGAAATTAGCGTACCTTTACAATGGGAGTGATAAATTCCTCCAGAAAACGATGTCGCAGAAGAGAGGGCCAGTTGTGATGGATAAAATTAATCAGCAAGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:40406584\|40406917	hsa-miR-208a-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-208a-3p	0	0	1
chr17:40406584\|40406917	hsa-miR-328-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-328-3p	0	0	1
chr17:40406584\|40406917	hsa-miR-193b-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-193b-3p	0	0	1
chr17:40406584\|40406917	hsa-miR-616-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-616-3p	0	0	1
chr17:40406584\|40406917	hsa-miR-619-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-619-3p	0	0	1
chr17:40406584\|40406917	hsa-miR-765	0	0	1
chr17:40406584\|40406917	hsa-miR-208b-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-208b-3p	0	0	1
chr17:40406584\|40406917	hsa-miR-1236-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-1236-3p	0	0	1
chr17:40406584\|40406917	hsa-miR-1200	0	0	1
chr17:40406584\|40406917	hsa-miR-1291	0	0	1
chr17:40406584\|40406917	hsa-miR-1299	0	0	1
chr17:40406584\|40406917	hsa-miR-1256	0	0	1
chr17:40406584\|40406917	hsa-miR-548m	0	0	1
chr17:40406584\|40406917	hsa-miR-140-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-490-3p	0	0	1
chr17:40406584\|40406917	hsa-miR-508-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-490-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-513a-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-628-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-576-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-524-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-34c-3p	0	0	1
chr17:40406584\|40406917	hsa-miR-483-3p	1	0	1
chr17:40406584\|40406917	hsa-miR-193a-3p	0	0	1
chr17:40406584\|40406917	hsa-miR-142-3p	0	0	1
chr17:40406584\|40406917	hsa-miR-590-3p	0	0	1
chr17:40406584\|40406917	hsa-miR-548d-3p	0	0	1
chr17:40406584\|40406917	hsa-miR-520d-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-371-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-128	0	0	1
chr17:40406584\|40406917	hsa-miR-220c	0	0	1
chr17:40406584\|40406917	hsa-miR-7	0	0	1
chr17:40406584\|40406917	hsa-miR-516b	0	0	1
chr17:40406584\|40406917	hsa-miR-499-5p	0	0	1
chr17:40406584\|40406917	hsa-miR-892b	1	0	0
chr17:40406584\|40406917	hsa-miR-3183	1	0	0
chr17:40406584\|40406917	hsa-miR-4297	0	1	0
chr17:40406584\|40406917	hsa-miR-5192	1	0	0
chr17:40406584\|40406917	hsa-miR-6077	0	1	0
chr17:40406584\|40406917	hsa-miR-149-5p	1	0	0
chr17:40406584\|40406917	hsa-miR-4709-3p	0	1	0
chr17:40406584\|40406917	hsa-miR-6730-5p	1	0	0
chr17:40406584\|40406917	hsa-miR-138-1-3p	0	1	0
chr17:40406584\|40406917	hsa-miR-6787-3p	1	0	0
chr17:40406584\|40406917	hsa-miR-6715b-3p	0	1	0
chr17:40406584\|40406917	hsa-miR-6884-3p	0	1	0
chr17:40406584\|40406917	hsa-miR-7111-3p	1	0	0
chr17:40406584\|40406917	hsa-miR-516b-5p	0	1	0
chr17:40406584\|40406917	hsa-miR-7152-3p	1	0	0
chr17:40406584\|40406917	hsa-miR-7112-3p	1	0	0
chr17:40406584\|40406917	hsa-miR-6741-3p	1	0	0
chr17:40406584\|40406917	hsa-miR-3614-3p	0	1	0
chr17:40406584\|40406917	hsa-miR-6880-3p	1	0	0
chr17:40406584\|40406917	hsa-miR-518c-5p	1	0	0
chr17:40406584\|40406917	hsa-miR-1207-3p	1	1	0
chr17:40406584\|40406917	hsa-miR-1911-5p	0	1	0
chr17:40406584\|40406917	hsa-miR-3144-5p	0	1	0
chr17:40406584\|40406917	hsa-miR-3162-3p	1	0	0
chr17:40406584\|40406917	hsa-miR-1185-1-3p	0	1	0
chr17:40406584\|40406917	hsa-miR-1185-2-3p	0	1	0
chr17:40406584\|40406917	hsa-miR-6810-3p	1	0	0
chr17:40406584\|40406917	hsa-miR-6775-3p	1	0	0
chr17:40406584\|40406917	hsa-miR-4723-3p	1	0	0
chr17:40406584\|40406917	hsa-miR-5581-5p	0	1	0
chr17:40406584\|40406917	hsa-miR-6781-3p	1	0	0
chr17:40406584\|40406917	hsa-miR-6827-3p	1	0	0
chr17:40406584\|40406917	hsa-miR-4680-3p	0	1	0
chr17:40406584\|40406917	hsa-miR-302a-5p	1	1	0
chr17:40406584\|40406917	hsa-miR-548a-3p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:40406584\|40406917
ORF Type	ORF1
Protein Length	27
Nucleotide Length	84
Protein Sequence	MIWSRTLPLFKFRKAVKCHFLLVFRYL
Nucleotide Sequence	ATGATTTGGAGTAGAACTCTTCCACTCTTCAAATTCAGGAAGGCTGTAAAATGCCATTTCTTGCTTGTTTTTAGATACCTGTGA

CircID	chr17:40406584\|40406917
ORF Type	ORF2
Protein Length	28
Nucleotide Length	84
Protein Sequence	MAFYSLPEFEEWKSSTPNHKKWKVKYYK
Nucleotide Sequence	ATGGCATTTTACAGCCTTCCTGAATTTGAAGAGTGGAAGAGTTCTACTCCAAATCATAAAAAATGGAAAGTCAAATATTACAAA

CircID	chr17:40406584\|40406917
ORF Type	ORF3
Protein Length	47
Nucleotide Length	144
Protein Sequence	MALSSATSFSGGIYHSHCKGTLISKYHHGYFKTLLLKPGYTYKPRHM
Nucleotide Sequence	CTGGCCCTCTCTTCTGCGACATCGTTTTCTGGAGGAATTTATCACTCCCATTGTAAAGGTACGCTAATTTCTAAGTACCATCATGGATATTTTAAGACCCTACTCCTCAAACCTGGATATACATATAAGCCCCGTCACATGTAG

CircID	chr17:40406584\|40406917
ORF Type	ORF4
Protein Length	30
Nucleotide Length	93
Protein Sequence	LLINFIHHNWPSLLRHRFLEEFITPIVKVR
Nucleotide Sequence	TTGCTGATTAATTTTATCCATCACAACTGGCCCTCTCTTCTGCGACATCGTTTTCTGGAGGAATTTATCACTCCCATTGTAAAGGTACGCTAA

CircID	chr17:40406584\|40406917
ORF Type	ORF5
Protein Length	41
Nucleotide Length	126
Protein Sequence	MDILRPYSSNLDIHISPVTCSGIQGTPQCTKPQSLFFITGI
Nucleotide Sequence	ATGGATATTTTAAGACCCTACTCCTCAAACCTGGATATACATATAAGCCCCGTCACATGTAGTGGTATACAGGGGACCCCACAGTGTACAAAGCCACAGTCATTGTTTTTTATCACAGGTATCTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information