CircRNA Information

General Information
circRNA Basic Information
CircID chr17:40456656|40456796
Strand +
CircType exon
Host Gene ENSG00000141753.6;
Algorism CIRI2;
Sequence ACCCCAGGCTCTGGCTTACCCCAAGGGCACACCCATGCTCACAAACACACACACACGCACGCACACGCACACGTGCACACGCGCATTTGAGGGAAACTTCTGGGCCGCAGGCAGAGACAGGACTCAGACTCAGACTCCACT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:40456656|40456796 hsa-miR-210-5p 0 0 1
chr17:40456656|40456796 hsa-miR-210-3p 0 0 1
chr17:40456656|40456796 hsa-miR-555 0 1 1
chr17:40456656|40456796 hsa-miR-593-5p 0 0 1
chr17:40456656|40456796 hsa-miR-593-3p 0 0 1
chr17:40456656|40456796 hsa-miR-609 0 0 1
chr17:40456656|40456796 hsa-miR-627-5p 0 0 1
chr17:40456656|40456796 hsa-miR-627-3p 0 0 1
chr17:40456656|40456796 hsa-miR-661 1 0 1
chr17:40456656|40456796 hsa-miR-758-5p 0 0 1
chr17:40456656|40456796 hsa-miR-758-3p 0 0 1
chr17:40456656|40456796 hsa-miR-924 0 0 1
chr17:40456656|40456796 hsa-miR-938 0 0 1
chr17:40456656|40456796 hsa-miR-1289 0 0 1
chr17:40456656|40456796 hsa-miR-105 0 0 1
chr17:40456656|40456796 hsa-miR-642 0 0 1
chr17:40456656|40456796 hsa-miR-1308 0 0 1
chr17:40456656|40456796 hsa-miR-595 1 0 0
chr17:40456656|40456796 hsa-miR-297 1 1 0
chr17:40456656|40456796 hsa-miR-4322 1 0 0
chr17:40456656|40456796 hsa-miR-4455 1 0 0
chr17:40456656|40456796 hsa-miR-4522 1 0 0
chr17:40456656|40456796 hsa-miR-4682 1 0 0
chr17:40456656|40456796 hsa-miR-5572 0 1 0
chr17:40456656|40456796 hsa-miR-12115 0 1 0
chr17:40456656|40456796 hsa-miR-7847-3p 1 0 0
chr17:40456656|40456796 hsa-miR-6867-5p 1 0 0
chr17:40456656|40456796 hsa-miR-6890-5p 1 1 0
chr17:40456656|40456796 hsa-miR-6806-5p 1 0 0
chr17:40456656|40456796 hsa-miR-6742-5p 1 0 0
chr17:40456656|40456796 hsa-miR-6772-5p 1 0 0
chr17:40456656|40456796 hsa-miR-6793-5p 1 0 0
chr17:40456656|40456796 hsa-miR-6821-5p 1 0 0
chr17:40456656|40456796 hsa-miR-6735-3p 1 0 0
chr17:40456656|40456796 hsa-miR-1226-5p 1 0 0
chr17:40456656|40456796 hsa-miR-6853-5p 1 0 0
chr17:40456656|40456796 hsa-miR-1229-5p 1 0 0
chr17:40456656|40456796 hsa-miR-5001-3p 0 1 0
chr17:40456656|40456796 hsa-miR-574-5p 1 1 0
chr17:40456656|40456796 hsa-miR-3120-5p 1 0 0
chr17:40456656|40456796 hsa-miR-1910-5p 1 1 0
chr17:40456656|40456796 hsa-miR-6838-3p 0 1 0
chr17:40456656|40456796 hsa-miR-372-5p 0 1 0
chr17:40456656|40456796 hsa-miR-6812-5p 1 0 0
chr17:40456656|40456796 hsa-miR-6737-5p 1 0 0
chr17:40456656|40456796 hsa-miR-6752-5p 1 0 0
chr17:40456656|40456796 hsa-miR-6819-5p 1 0 0
chr17:40456656|40456796 hsa-miR-6722-3p 1 0 0
chr17:40456656|40456796 hsa-miR-6751-5p 1 0 0
chr17:40456656|40456796 hsa-miR-6780b-5p 1 0 0
chr17:40456656|40456796 hsa-miR-4725-3p 1 0 0
chr17:40456656|40456796 hsa-miR-6848-5p 1 0 0
chr17:40456656|40456796 hsa-miR-3198 1 0 0
chr17:40456656|40456796 hsa-miR-6753-3p 1 0 0
chr17:40456656|40456796 hsa-miR-5699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:40456656|40456796
ORF Type ORF1
Protein Length 43
Nucleotide Length 129
Protein Sequence MAYPKGTPMLTNTHTRTHTHTCTRAFEGNFWAAGRDRTQTQTP
Nucleotide Sequence CTGGCTTACCCCAAGGGCACACCCATGCTCACAAACACACACACACGCACGCACACGCACACGTGCACACGCGCATTTGAGGGAAACTTCTGGGCCGCAGGCAGAGACAGGACTCAGACTCAGACTCCA

CircID chr17:40456656|40456796
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MSLPAAQKFPSNARVHVCVCVRVCVFVSMGVPLG
Nucleotide Sequence CTGTCTCTGCCTGCGGCCCAGAAGTTTCCCTCAAATGCGCGTGTGCACGTGTGCGTGTGCGTGCGTGTGTGTGTGTTTGTGAGCATGGGTGTGCCCTTGGGGTAA

CircID chr17:40456656|40456796
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MSLSPVSACGPEVSLKCACARVRVRACVCVCEHGCALGVSQSLG
Nucleotide Sequence CTGAGTCTGAGTCCTGTCTCTGCCTGCGGCCCAGAAGTTTCCCTCAAATGCGCGTGTGCACGTGTGCGTGTGCGTGCGTGTGTGTGTGTTTGTGAGCATGGGTGTGCCCTTGGGGTAAGCCAGAGCCTGGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites