CircNet

General Information

circRNA Basic Information

CircID	chr17:40639141\|40639298
Strand	+
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	TTTATGTGTGAAGAAGCAGACTTGTGTGTGTCTGTTCCTCTGAATCCATAAGGTTAGTCTTATAGGAATTCTCTTTCCCCTTGAAAGAACTATAGACCCTGATACAGGTTTCCCTGTATTGGCTGCCCATCCTACCACTTTTGACAGTTTCCATGCCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:40639141\|40639298	hsa-miR-377-5p	0	0	1
chr17:40639141\|40639298	hsa-miR-377-3p	0	0	1
chr17:40639141\|40639298	hsa-miR-412-5p	0	0	1
chr17:40639141\|40639298	hsa-miR-412-3p	0	0	1
chr17:40639141\|40639298	hsa-miR-498-5p	0	0	1
chr17:40639141\|40639298	hsa-miR-498-3p	0	0	1
chr17:40639141\|40639298	hsa-miR-649	0	0	1
chr17:40639141\|40639298	hsa-miR-1182	0	0	1
chr17:40639141\|40639298	hsa-miR-1246	0	0	1
chr17:40639141\|40639298	hsa-miR-548g-5p	0	0	1
chr17:40639141\|40639298	hsa-miR-548g-3p	0	0	1
chr17:40639141\|40639298	hsa-miR-1265	0	0	1
chr17:40639141\|40639298	hsa-miR-337-3p	0	0	1
chr17:40639141\|40639298	hsa-miR-499-5p	0	0	1
chr17:40639141\|40639298	hsa-miR-4496	1	0	0
chr17:40639141\|40639298	hsa-miR-8085	1	1	0
chr17:40639141\|40639298	hsa-miR-125b-2-3p	0	1	0
chr17:40639141\|40639298	hsa-miR-3622b-5p	1	0	0
chr17:40639141\|40639298	hsa-miR-6783-5p	0	1	0
chr17:40639141\|40639298	hsa-miR-3126-5p	1	0	0
chr17:40639141\|40639298	hsa-miR-486-3p	1	1	0
chr17:40639141\|40639298	hsa-miR-1207-5p	1	0	0
chr17:40639141\|40639298	hsa-miR-6756-5p	1	0	0
chr17:40639141\|40639298	hsa-miR-6739-5p	0	1	0
chr17:40639141\|40639298	hsa-miR-6859-5p	0	1	0
chr17:40639141\|40639298	hsa-miR-7153-5p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:40639141\|40639298
ORF Type	ORF1
Protein Length	50
Nucleotide Length	153
Protein Sequence	METVKSGRMGSQYRETCIRVYSSFKGKENSYKTNLMDSEEQTHTSLLLHT
Nucleotide Sequence	ATGGAAACTGTCAAAAGTGGTAGGATGGGCAGCCAATACAGGGAAACCTGTATCAGGGTCTATAGTTCTTTCAAGGGGAAAGAGAATTCCTATAAGACTAACCTTATGGATTCAGAGGAACAGACACACACAAGTCTGCTTCTTCACACATAA

CircID	chr17:40639141\|40639298
ORF Type	ORF2
Protein Length	49
Nucleotide Length	147
Protein Sequence	MSKVVGWAANTGKPVSGSIVLSRGKRIPIRLTLWIQRNRHTQVCFFTHK
Nucleotide Sequence	CTGTCAAAAGTGGTAGGATGGGCAGCCAATACAGGGAAACCTGTATCAGGGTCTATAGTTCTTTCAAGGGGAAAGAGAATTCCTATAAGACTAACCTTATGGATTCAGAGGAACAGACACACACAAGTCTGCTTCTTCACACATAAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information