CircRNA Information

General Information
circRNA Basic Information
CircID chr17:41502995|41503331
Strand -
CircType exon
Host Gene ENSG00000171401.13;
Algorism CIRI2;
Sequence TGCTCCCTCATCTCTGCCAGCACGCGGGTCAGGTCAATGCCTGGGGTGGCATCCATCTCCACGTTGACCTGGCCGACCACCTGGTTGCTAAATTCCTTCATCTCCTGTGGGGATGGGAAAGGAAGATGTGTGAGGCTACTCATCCTCCCTCTCCTTGGCTCTGAGTGCTGGCAGAGTGTTCTGGAGAGTGTTTCCAGGTCCCACAGTGGAGGACTGTGTCCAGTTGCAGGGGAGGGCTCCTCCTTCTCACTGGAGGTTGTTGAGCCCAGGGCAGCCTGCAATTCCCGCTCACCTCTTCATGGTTCTTCTTCATGTAGGCTAGCTCTTCATTCAGGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:41502995|41503331 hsa-miR-192-5p 0 0 1
chr17:41502995|41503331 hsa-miR-192-3p 0 0 1
chr17:41502995|41503331 hsa-miR-215-5p 0 0 1
chr17:41502995|41503331 hsa-miR-215-3p 0 0 1
chr17:41502995|41503331 hsa-miR-143-5p 0 0 1
chr17:41502995|41503331 hsa-miR-143-3p 0 0 1
chr17:41502995|41503331 hsa-miR-377-5p 0 0 1
chr17:41502995|41503331 hsa-miR-377-3p 0 0 1
chr17:41502995|41503331 hsa-miR-492 0 0 1
chr17:41502995|41503331 hsa-miR-619-5p 0 0 1
chr17:41502995|41503331 hsa-miR-619-3p 0 0 1
chr17:41502995|41503331 hsa-miR-620 0 0 1
chr17:41502995|41503331 hsa-miR-631 0 0 1
chr17:41502995|41503331 hsa-miR-766-5p 0 0 1
chr17:41502995|41503331 hsa-miR-766-3p 0 0 1
chr17:41502995|41503331 hsa-miR-765 0 0 1
chr17:41502995|41503331 hsa-miR-874-5p 0 0 1
chr17:41502995|41503331 hsa-miR-874-3p 0 0 1
chr17:41502995|41503331 hsa-miR-891b 0 0 1
chr17:41502995|41503331 hsa-miR-1202 0 0 1
chr17:41502995|41503331 hsa-miR-1253 0 0 1
chr17:41502995|41503331 hsa-miR-1255a 0 0 1
chr17:41502995|41503331 hsa-miR-1256 0 0 1
chr17:41502995|41503331 hsa-miR-1270 0 0 1
chr17:41502995|41503331 hsa-miR-1252-5p 0 0 1
chr17:41502995|41503331 hsa-miR-1252-3p 0 0 1
chr17:41502995|41503331 hsa-miR-1321 0 0 1
chr17:41502995|41503331 hsa-miR-1825 0 0 1
chr17:41502995|41503331 hsa-miR-146b-3p 0 0 1
chr17:41502995|41503331 hsa-miR-199a-5p 0 0 1
chr17:41502995|41503331 hsa-miR-331-3p 0 0 1
chr17:41502995|41503331 hsa-miR-875-3p 0 0 1
chr17:41502995|41503331 hsa-miR-199b-5p 0 0 1
chr17:41502995|41503331 hsa-miR-342-3p 0 0 1
chr17:41502995|41503331 hsa-miR-548b-3p 0 0 1
chr17:41502995|41503331 hsa-miR-1233 0 0 1
chr17:41502995|41503331 hsa-miR-323-5p 0 0 1
chr17:41502995|41503331 hsa-miR-1255b 0 0 1
chr17:41502995|41503331 hsa-miR-1300 0 0 1
chr17:41502995|41503331 hsa-miR-638 1 0 0
chr17:41502995|41503331 hsa-miR-1471 1 0 0
chr17:41502995|41503331 hsa-miR-3125 1 0 0
chr17:41502995|41503331 hsa-miR-3185 1 0 0
chr17:41502995|41503331 hsa-miR-3916 1 0 0
chr17:41502995|41503331 hsa-miR-4498 1 0 0
chr17:41502995|41503331 hsa-miR-4511 1 0 0
chr17:41502995|41503331 hsa-miR-4654 1 0 0
chr17:41502995|41503331 hsa-miR-4681 1 0 0
chr17:41502995|41503331 hsa-miR-4734 1 0 0
chr17:41502995|41503331 hsa-miR-6165 1 0 0
chr17:41502995|41503331 hsa-miR-6749-3p 1 0 0
chr17:41502995|41503331 hsa-miR-6746-5p 1 0 0
chr17:41502995|41503331 hsa-miR-4709-3p 1 0 0
chr17:41502995|41503331 hsa-miR-4722-5p 1 0 0
chr17:41502995|41503331 hsa-miR-6741-5p 1 0 0
chr17:41502995|41503331 hsa-miR-3928-3p 1 0 0
chr17:41502995|41503331 hsa-miR-6782-5p 1 0 0
chr17:41502995|41503331 hsa-miR-6821-5p 1 0 0
chr17:41502995|41503331 hsa-miR-1228-5p 1 0 0
chr17:41502995|41503331 hsa-miR-3619-3p 1 0 0
chr17:41502995|41503331 hsa-miR-6837-3p 1 0 0
chr17:41502995|41503331 hsa-miR-589-5p 1 0 0
chr17:41502995|41503331 hsa-miR-3664-5p 1 0 0
chr17:41502995|41503331 hsa-miR-6812-5p 1 0 0
chr17:41502995|41503331 hsa-miR-6816-5p 1 0 0
chr17:41502995|41503331 hsa-miR-6851-5p 1 0 0
chr17:41502995|41503331 hsa-miR-6774-5p 1 0 0
chr17:41502995|41503331 hsa-miR-3620-5p 1 0 0
chr17:41502995|41503331 hsa-miR-4745-5p 1 0 0
chr17:41502995|41503331 hsa-miR-1238-5p 1 0 0
chr17:41502995|41503331 hsa-miR-4758-5p 1 0 0
chr17:41502995|41503331 hsa-miR-6511b-5p 1 0 0
chr17:41502995|41503331 hsa-miR-7151-3p 1 0 0
chr17:41502995|41503331 hsa-miR-6783-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:41502995|41503331
ORF Type ORF1
Protein Length 100
Nucleotide Length 300
Protein Sequence MPGVASISTLTWPTTWLLNSFISCGDGKGRCVRLLILPLLGSECWQSVLESVSRSHSGGLCPVAGEGSSFSLEVVEPRAACNSRSPLHGSSSCRLALHSG
Nucleotide Sequence ATGCCTGGGGTGGCATCCATCTCCACGTTGACCTGGCCGACCACCTGGTTGCTAAATTCCTTCATCTCCTGTGGGGATGGGAAAGGAAGATGTGTGAGGCTACTCATCCTCCCTCTCCTTGGCTCTGAGTGCTGGCAGAGTGTTCTGGAGAGTGTTTCCAGGTCCCACAGTGGAGGACTGTGTCCAGTTGCAGGGGAGGGCTCCTCCTTCTCACTGGAGGTTGTTGAGCCCAGGGCAGCCTGCAATTCCCGCTCACCTCTTCATGGTTCTTCTTCATGTAGGCTAGCTCTTCATTCAGGC
CircID chr17:41502995|41503331
ORF Type ORF2
Protein Length 55
Nucleotide Length 168
Protein Sequence MALSAGRVFWRVFPGPTVEDCVQLQGRAPPSHWRLLSPGQPAIPAHLFMVLLHVG
Nucleotide Sequence TTGGCTCTGAGTGCTGGCAGAGTGTTCTGGAGAGTGTTTCCAGGTCCCACAGTGGAGGACTGTGTCCAGTTGCAGGGGAGGGCTCCTCCTTCTCACTGGAGGTTGTTGAGCCCAGGGCAGCCTGCAATTCCCGCTCACCTCTTCATGGTTCTTCTTCATGTAGGCTAG
CircID chr17:41502995|41503331
ORF Type ORF3
Protein Length 31
Nucleotide Length 96
Protein Sequence MADHLVAKFLHLLWGWERKMCEATHPPSPWL
Nucleotide Sequence CTGGCCGACCACCTGGTTGCTAAATTCCTTCATCTCCTGTGGGGATGGGAAAGGAAGATGTGTGAGGCTACTCATCCTCCCTCTCCTTGGCTCTGA
CircID chr17:41502995|41503331
ORF Type ORF4
Protein Length 31
Nucleotide Length 96
Protein Sequence MAECSGECFQVPQWRTVSSCRGGLLLLTGGC
Nucleotide Sequence CTGGCAGAGTGTTCTGGAGAGTGTTTCCAGGTCCCACAGTGGAGGACTGTGTCCAGTTGCAGGGGAGGGCTCCTCCTTCTCACTGGAGGTTGTTGA
CircID chr17:41502995|41503331
ORF Type ORF5
Protein Length 64
Nucleotide Length 195
Protein Sequence MNEELAYMKKNHEEVSGNCRLPWAQQPPVRRRSPPLQLDTVLHCGTWKHSPEHSASTQSQGEGG
Nucleotide Sequence CTGAATGAAGAGCTAGCCTACATGAAGAAGAACCATGAAGAGGTGAGCGGGAATTGCAGGCTGCCCTGGGCTCAACAACCTCCAGTGAGAAGGAGGAGCCCTCCCCTGCAACTGGACACAGTCCTCCACTGTGGGACCTGGAAACACTCTCCAGAACACTCTGCCAGCACTCAGAGCCAAGGAGAGGGAGGATGA
CircID chr17:41502995|41503331
ORF Type ORF6
Protein Length 93
Nucleotide Length 279
Protein Sequence MQAALGSTTSSEKEEPSPATGHSPPLWDLETLSRTLCQHSEPRRGRMSSLTHLPFPSPQEMKEFSNQVVGQVNVEMDATPGIDLTRVLAEMRE
Nucleotide Sequence TTGCAGGCTGCCCTGGGCTCAACAACCTCCAGTGAGAAGGAGGAGCCCTCCCCTGCAACTGGACACAGTCCTCCACTGTGGGACCTGGAAACACTCTCCAGAACACTCTGCCAGCACTCAGAGCCAAGGAGAGGGAGGATGAGTAGCCTCACACATCTTCCTTTCCCATCCCCACAGGAGATGAAGGAATTTAGCAACCAGGTGGTCGGCCAGGTCAACGTGGAGATGGATGCCACCCCAGGCATTGACCTGACCCGCGTGCTGGCAGAGATGAGGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab