CircRNA Information

General Information
circRNA Basic Information
CircID chr17:41524213|41524504
Strand -
CircType exon
Host Gene ENSG00000171345.12;
Algorism CIRI2;
Sequence CTGCTCATCTGGAGCTGCTCCGTGTGGCCAGCGACCTCCCGGTTCAATTCTTCAGTCTGCAGAGAGAGGAAGAAGAGGGAATAAGCATTGAGTCAGACCTTCGCGTAGGGAACACAAAGCCCTCCCCTTCCTAACCCCCAAAGGGTGCCTGCTTCCCTCTACCTACCCGGCTGGTGAACCAGGCTTCAGCATCCTTCCGGTTCTGCTCGGCCATGACCTCATATTGGCTTCGCATGTCACTCAGGATCTTGGCGAGATCGGTGCCCGGAGCGGAATCCACCTCCACACTGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:41524213|41524504 hsa-miR-197-5p 0 0 1
chr17:41524213|41524504 hsa-miR-197-3p 0 0 1
chr17:41524213|41524504 hsa-miR-345-5p 0 0 1
chr17:41524213|41524504 hsa-miR-345-3p 0 0 1
chr17:41524213|41524504 hsa-miR-196b-5p 0 0 1
chr17:41524213|41524504 hsa-miR-196b-3p 0 0 1
chr17:41524213|41524504 hsa-miR-493-5p 0 0 1
chr17:41524213|41524504 hsa-miR-493-3p 0 0 1
chr17:41524213|41524504 hsa-miR-572 0 0 1
chr17:41524213|41524504 hsa-miR-588 0 1 1
chr17:41524213|41524504 hsa-miR-599 0 0 1
chr17:41524213|41524504 hsa-miR-646 0 1 1
chr17:41524213|41524504 hsa-miR-1226-5p 0 0 1
chr17:41524213|41524504 hsa-miR-1226-3p 0 0 1
chr17:41524213|41524504 hsa-miR-1200 0 1 1
chr17:41524213|41524504 hsa-miR-1205 0 0 1
chr17:41524213|41524504 hsa-miR-1258 0 0 1
chr17:41524213|41524504 hsa-miR-1275 0 0 1
chr17:41524213|41524504 hsa-miR-1184 0 0 1
chr17:41524213|41524504 hsa-miR-642 0 0 1
chr17:41524213|41524504 hsa-miR-196a 0 0 1
chr17:41524213|41524504 hsa-miR-650 1 0 0
chr17:41524213|41524504 hsa-miR-661 1 0 0
chr17:41524213|41524504 hsa-miR-658 1 0 0
chr17:41524213|41524504 hsa-miR-2117 0 1 0
chr17:41524213|41524504 hsa-miR-3147 1 0 0
chr17:41524213|41524504 hsa-miR-3183 1 1 0
chr17:41524213|41524504 hsa-miR-4488 1 0 0
chr17:41524213|41524504 hsa-miR-4507 1 0 0
chr17:41524213|41524504 hsa-miR-4533 0 1 0
chr17:41524213|41524504 hsa-miR-4651 1 0 0
chr17:41524213|41524504 hsa-miR-4660 0 1 0
chr17:41524213|41524504 hsa-miR-4706 1 0 0
chr17:41524213|41524504 hsa-miR-4739 1 0 0
chr17:41524213|41524504 hsa-miR-4754 1 0 0
chr17:41524213|41524504 hsa-miR-5572 1 0 0
chr17:41524213|41524504 hsa-miR-6081 0 1 0
chr17:41524213|41524504 hsa-miR-6086 1 0 0
chr17:41524213|41524504 hsa-miR-6127 1 0 0
chr17:41524213|41524504 hsa-miR-6133 1 0 0
chr17:41524213|41524504 hsa-miR-8089 1 0 0
chr17:41524213|41524504 hsa-miR-9500 0 1 0
chr17:41524213|41524504 hsa-miR-6861-5p 1 1 0
chr17:41524213|41524504 hsa-miR-6825-5p 1 0 0
chr17:41524213|41524504 hsa-miR-4687-3p 1 0 0
chr17:41524213|41524504 hsa-miR-219a-1-3p 0 1 0
chr17:41524213|41524504 hsa-miR-6799-5p 0 1 0
chr17:41524213|41524504 hsa-miR-1236-5p 1 1 0
chr17:41524213|41524504 hsa-miR-6089 1 0 0
chr17:41524213|41524504 hsa-miR-3192-5p 1 0 0
chr17:41524213|41524504 hsa-miR-6880-5p 1 1 0
chr17:41524213|41524504 hsa-miR-6890-5p 0 1 0
chr17:41524213|41524504 hsa-miR-6873-3p 1 1 0
chr17:41524213|41524504 hsa-miR-877-3p 0 1 0
chr17:41524213|41524504 hsa-miR-6732-5p 1 0 0
chr17:41524213|41524504 hsa-miR-6805-5p 1 0 0
chr17:41524213|41524504 hsa-miR-6798-5p 1 0 0
chr17:41524213|41524504 hsa-miR-6881-5p 1 0 0
chr17:41524213|41524504 hsa-miR-6850-5p 1 0 0
chr17:41524213|41524504 hsa-miR-7109-5p 1 0 0
chr17:41524213|41524504 hsa-miR-4786-3p 0 1 0
chr17:41524213|41524504 hsa-miR-1229-5p 1 0 0
chr17:41524213|41524504 hsa-miR-296-3p 1 0 0
chr17:41524213|41524504 hsa-miR-6771-5p 1 1 0
chr17:41524213|41524504 hsa-miR-3202 0 1 0
chr17:41524213|41524504 hsa-miR-4743-5p 1 0 0
chr17:41524213|41524504 hsa-miR-4787-5p 1 0 0
chr17:41524213|41524504 hsa-miR-149-3p 1 0 0
chr17:41524213|41524504 hsa-miR-6824-5p 1 0 0
chr17:41524213|41524504 hsa-miR-7843-3p 0 1 0
chr17:41524213|41524504 hsa-miR-6828-5p 0 1 0
chr17:41524213|41524504 hsa-miR-7112-5p 1 0 0
chr17:41524213|41524504 hsa-miR-1225-5p 1 0 0
chr17:41524213|41524504 hsa-miR-873-3p 1 0 0
chr17:41524213|41524504 hsa-miR-4778-3p 0 1 0
chr17:41524213|41524504 hsa-miR-4649-3p 0 1 0
chr17:41524213|41524504 hsa-miR-6761-3p 0 1 0
chr17:41524213|41524504 hsa-miR-4763-3p 1 0 0
chr17:41524213|41524504 hsa-miR-6769b-5p 0 1 0
chr17:41524213|41524504 hsa-miR-6816-5p 1 0 0
chr17:41524213|41524504 hsa-miR-1343-5p 1 0 0
chr17:41524213|41524504 hsa-miR-6726-5p 1 0 0
chr17:41524213|41524504 hsa-miR-6743-5p 1 0 0
chr17:41524213|41524504 hsa-miR-6752-5p 1 0 0
chr17:41524213|41524504 hsa-miR-6756-5p 1 0 0
chr17:41524213|41524504 hsa-miR-6769a-5p 0 1 0
chr17:41524213|41524504 hsa-miR-6803-5p 1 1 0
chr17:41524213|41524504 hsa-miR-6842-5p 1 0 0
chr17:41524213|41524504 hsa-miR-7107-5p 1 0 0
chr17:41524213|41524504 hsa-miR-7110-5p 1 0 0
chr17:41524213|41524504 hsa-miR-6751-5p 1 1 0
chr17:41524213|41524504 hsa-miR-6779-5p 1 0 0
chr17:41524213|41524504 hsa-miR-4728-5p 1 0 0
chr17:41524213|41524504 hsa-miR-5196-5p 1 0 0
chr17:41524213|41524504 hsa-miR-6780b-5p 1 0 0
chr17:41524213|41524504 hsa-miR-10396b-5p 1 0 0
chr17:41524213|41524504 hsa-miR-328-5p 1 0 0
chr17:41524213|41524504 hsa-miR-6858-5p 1 0 0
chr17:41524213|41524504 hsa-miR-6883-5p 0 1 0
chr17:41524213|41524504 hsa-miR-6831-5p 0 1 0
chr17:41524213|41524504 hsa-miR-6885-5p 1 0 0
chr17:41524213|41524504 hsa-miR-939-5p 1 0 0
chr17:41524213|41524504 hsa-miR-4758-5p 1 0 0
chr17:41524213|41524504 hsa-miR-3940-5p 1 0 0
chr17:41524213|41524504 hsa-miR-6758-5p 1 0 0
chr17:41524213|41524504 hsa-miR-4646-5p 1 0 0
chr17:41524213|41524504 hsa-miR-4747-5p 0 1 0
chr17:41524213|41524504 hsa-miR-6891-5p 1 0 0
chr17:41524213|41524504 hsa-miR-6785-5p 1 1 0
chr17:41524213|41524504 hsa-miR-3689d 0 1 0
chr17:41524213|41524504 hsa-miR-7107-3p 1 0 0
chr17:41524213|41524504 hsa-miR-3059-5p 0 1 0
chr17:41524213|41524504 hsa-miR-4756-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:41524213|41524504
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence LLIWSCSVWPATSRFNSSVCRERKKRE
Nucleotide Sequence CTGCTCATCTGGAGCTGCTCCGTGTGGCCAGCGACCTCCCGGTTCAATTCTTCAGTCTGCAGAGAGAGGAAGAAGAGGGAATAA

CircID chr17:41524213|41524504
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MLPSTYPAGEPGFSILPVLLGHDLILASHVTQDLGEIGARSGIHLHTD
Nucleotide Sequence CTGCTTCCCTCTACCTACCCGGCTGGTGAACCAGGCTTCAGCATCCTTCCGGTTCTGCTCGGCCATGACCTCATATTGGCTTCGCATGTCACTCAGGATCTTGGCGAGATCGGTGCCCGGAGCGGAATCCACCTCCACACTGAC

CircID chr17:41524213|41524504
ORF Type ORF3
Protein Length 41
Nucleotide Length 126
Protein Sequence MELLRVASDLPVQFFSLQREEEEGISIESDLRVGNTKPSPS
Nucleotide Sequence CTGGAGCTGCTCCGTGTGGCCAGCGACCTCCCGGTTCAATTCTTCAGTCTGCAGAGAGAGGAAGAAGAGGGAATAAGCATTGAGTCAGACCTTCGCGTAGGGAACACAAAGCCCTCCCCTTCCTAA

CircID chr17:41524213|41524504
ORF Type ORF4
Protein Length 40
Nucleotide Length 120
Protein Sequence MVNQASASFRFCSAMTSYWLRMSLRILARSVPGAESTSTL
Nucleotide Sequence CTGGTGAACCAGGCTTCAGCATCCTTCCGGTTCTGCTCGGCCATGACCTCATATTGGCTTCGCATGTCACTCAGGATCTTGGCGAGATCGGTGCCCGGAGCGGAATCCACCTCCACACTG

CircID chr17:41524213|41524504
ORF Type ORF5
Protein Length 37
Nucleotide Length 114
Protein Sequence MSDMRSQYEVMAEQNRKDAEAWFTSRVGRGKQAPFGG
Nucleotide Sequence CTGAGTGACATGCGAAGCCAATATGAGGTCATGGCCGAGCAGAACCGGAAGGATGCTGAAGCCTGGTTCACCAGCCGGGTAGGTAGAGGGAAGCAGGCACCCTTTGGGGGTTAG

CircID chr17:41524213|41524504
ORF Type ORF6
Protein Length 29
Nucleotide Length 90
Protein Sequence MGVRKGRALCSLREGLTQCLFPLLPLSAD
Nucleotide Sequence TTGGGGGTTAGGAAGGGGAGGGCTTTGTGTTCCCTACGCGAAGGTCTGACTCAATGCTTATTCCCTCTTCTTCCTCTCTCTGCAGACTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites