CircRNA Information

General Information
circRNA Basic Information
CircID chr17:41691262|41691444
Strand +
CircType exon
Host Gene ENSG00000173812.9;
Algorism CIRI2;
Sequence TCTGATAGAAGGTTGGCCTCACATTCTGATGTTTGGACATCCCTTAGCTAGGATATGTCTGGTCGAACAGACCTTTGTGGCAAGCCAGATGTCCTATCACCTCGCTAGCGGTAAGAGGGCCTCTTTGAGCTCTGTCCACCTAGTCAGGTTGGAGACACCAGGGGATCTACCACCAAAAGCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:41691262|41691444 hsa-miR-149-5p 0 0 1
chr17:41691262|41691444 hsa-miR-149-3p 0 0 1
chr17:41691262|41691444 hsa-miR-379-5p 0 0 1
chr17:41691262|41691444 hsa-miR-379-3p 0 0 1
chr17:41691262|41691444 hsa-miR-583 0 0 1
chr17:41691262|41691444 hsa-miR-1294 1 0 1
chr17:41691262|41691444 hsa-miR-1197 0 0 1
chr17:41691262|41691444 hsa-miR-361-5p 0 0 1
chr17:41691262|41691444 hsa-miR-331-3p 0 0 1
chr17:41691262|41691444 hsa-miR-876-3p 0 0 1
chr17:41691262|41691444 hsa-miR-515-5p 0 0 1
chr17:41691262|41691444 hsa-miR-323-5p 0 0 1
chr17:41691262|41691444 hsa-miR-612 1 0 0
chr17:41691262|41691444 hsa-miR-3138 0 1 0
chr17:41691262|41691444 hsa-miR-4316 1 1 0
chr17:41691262|41691444 hsa-miR-4656 1 0 0
chr17:41691262|41691444 hsa-miR-4741 1 0 0
chr17:41691262|41691444 hsa-miR-6134 0 1 0
chr17:41691262|41691444 hsa-miR-7978 0 1 0
chr17:41691262|41691444 hsa-miR-12135 0 1 0
chr17:41691262|41691444 hsa-miR-6861-5p 1 0 0
chr17:41691262|41691444 hsa-miR-6089 1 0 0
chr17:41691262|41691444 hsa-miR-6757-5p 0 1 0
chr17:41691262|41691444 hsa-miR-2467-5p 0 1 0
chr17:41691262|41691444 hsa-miR-6802-5p 0 1 0
chr17:41691262|41691444 hsa-miR-2115-3p 0 1 0
chr17:41691262|41691444 hsa-miR-6892-5p 0 1 0
chr17:41691262|41691444 hsa-miR-208a-5p 0 1 0
chr17:41691262|41691444 hsa-miR-3126-3p 0 1 0
chr17:41691262|41691444 hsa-miR-3670 0 1 0
chr17:41691262|41691444 hsa-miR-4714-3p 1 0 0
chr17:41691262|41691444 hsa-miR-6753-3p 0 1 0
chr17:41691262|41691444 hsa-miR-7107-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:41691262|41691444
ORF Type ORF1
Protein Length 60
Nucleotide Length 180
Protein Sequence LIEGWPHILMFGHPLARICLVEQTFVASQMSYHLASGKRASLSSVHLVRLETPGDLPPKA
Nucleotide Sequence CTGATAGAAGGTTGGCCTCACATTCTGATGTTTGGACATCCCTTAGCTAGGATATGTCTGGTCGAACAGACCTTTGTGGCAAGCCAGATGTCCTATCACCTCGCTAGCGGTAAGAGGGCCTCTTTGAGCTCTGTCCACCTAGTCAGGTTGGAGACACCAGGGGATCTACCACCAAAAGCT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites