CircRNA Information

General Information
circRNA Basic Information
CircID chr17:41769082|41769437
Strand +
CircType exon
Host Gene ENSG00000173801.15;
Algorism CIRI2;
Sequence TGCTCAACGACGAGGACCCGGTCTGTGAGGGTCCCTGCTAGGGTGGGGGCTGGGCAGGGAGGGGAGAGAGCAGATGTCCTCAGGGGAGGGACATTGTAGGGGTGGAGGGAGGTTATGACCCAGACTCTCCCGTGTGTGATGAGTCTGACTGGGGCCCTCCTCAGCTCTGTGGAAGGGTATCCCGGCCTCTCCTTAGTGCTCACGTCCCCGCCCCTGCCTTTGCCCTCCAGGTGGTGGTGACCAAGGCGGCCATGATTGTGAACCAGCTGTCGAAGAAGGAGGCGTCGCGGCGGGCCCTGATGGGCTCGCCCCAGCTGGTGGCCGCTGTCGTGCGTACCATGCAGAATACCAGCGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:41769082|41769437 hsa-miR-197-5p 0 0 1
chr17:41769082|41769437 hsa-miR-197-3p 0 0 1
chr17:41769082|41769437 hsa-miR-377-5p 0 0 1
chr17:41769082|41769437 hsa-miR-377-3p 0 0 1
chr17:41769082|41769437 hsa-miR-602 0 1 1
chr17:41769082|41769437 hsa-miR-619-5p 0 0 1
chr17:41769082|41769437 hsa-miR-619-3p 0 0 1
chr17:41769082|41769437 hsa-miR-630 0 0 1
chr17:41769082|41769437 hsa-miR-940 0 0 1
chr17:41769082|41769437 hsa-miR-1226-5p 0 0 1
chr17:41769082|41769437 hsa-miR-1226-3p 0 0 1
chr17:41769082|41769437 hsa-miR-1237-5p 0 0 1
chr17:41769082|41769437 hsa-miR-1237-3p 0 0 1
chr17:41769082|41769437 hsa-miR-1248 0 0 1
chr17:41769082|41769437 hsa-miR-1281 0 1 1
chr17:41769082|41769437 hsa-miR-513b-5p 0 0 1
chr17:41769082|41769437 hsa-miR-513b-3p 0 0 1
chr17:41769082|41769437 hsa-miR-296-5p 0 0 1
chr17:41769082|41769437 hsa-miR-1224-5p 0 0 1
chr17:41769082|41769437 hsa-miR-1207-3p 0 0 1
chr17:41769082|41769437 hsa-miR-331-3p 0 0 1
chr17:41769082|41769437 hsa-miR-767-3p 0 0 1
chr17:41769082|41769437 hsa-miR-1207-5p 1 1 1
chr17:41769082|41769437 hsa-miR-125a-5p 0 1 1
chr17:41769082|41769437 hsa-miR-521 0 0 1
chr17:41769082|41769437 hsa-miR-220b 0 0 1
chr17:41769082|41769437 hsa-miR-125b 0 0 1
chr17:41769082|41769437 hsa-miR-544 0 0 1
chr17:41769082|41769437 hsa-miR-768-3p 0 0 1
chr17:41769082|41769437 hsa-miR-663 0 0 1
chr17:41769082|41769437 hsa-miR-484 1 0 0
chr17:41769082|41769437 hsa-miR-663a 1 0 0
chr17:41769082|41769437 hsa-miR-762 1 0 0
chr17:41769082|41769437 hsa-miR-1470 1 1 0
chr17:41769082|41769437 hsa-miR-544b 0 1 0
chr17:41769082|41769437 hsa-miR-3196 1 0 0
chr17:41769082|41769437 hsa-miR-4257 1 0 0
chr17:41769082|41769437 hsa-miR-4287 0 1 0
chr17:41769082|41769437 hsa-miR-3918 0 1 0
chr17:41769082|41769437 hsa-miR-3135b 0 1 0
chr17:41769082|41769437 hsa-miR-4521 0 1 0
chr17:41769082|41769437 hsa-miR-4526 1 0 0
chr17:41769082|41769437 hsa-miR-3960 1 0 0
chr17:41769082|41769437 hsa-miR-4651 1 0 0
chr17:41769082|41769437 hsa-miR-4706 1 1 0
chr17:41769082|41769437 hsa-miR-4784 0 1 0
chr17:41769082|41769437 hsa-miR-5787 1 0 0
chr17:41769082|41769437 hsa-miR-6085 1 0 0
chr17:41769082|41769437 hsa-miR-7150 1 0 0
chr17:41769082|41769437 hsa-miR-8072 1 0 0
chr17:41769082|41769437 hsa-miR-12118 0 1 0
chr17:41769082|41769437 hsa-miR-6749-3p 1 1 0
chr17:41769082|41769437 hsa-miR-128-1-5p 1 0 0
chr17:41769082|41769437 hsa-miR-4731-5p 0 1 0
chr17:41769082|41769437 hsa-miR-4665-3p 1 0 0
chr17:41769082|41769437 hsa-miR-6836-3p 1 0 0
chr17:41769082|41769437 hsa-miR-210-3p 1 0 0
chr17:41769082|41769437 hsa-miR-6799-5p 1 0 0
chr17:41769082|41769437 hsa-miR-3663-3p 1 0 0
chr17:41769082|41769437 hsa-miR-6089 1 1 0
chr17:41769082|41769437 hsa-miR-6721-5p 1 0 0
chr17:41769082|41769437 hsa-miR-7110-3p 1 1 0
chr17:41769082|41769437 hsa-miR-1915-5p 1 0 0
chr17:41769082|41769437 hsa-miR-6845-3p 1 1 0
chr17:41769082|41769437 hsa-miR-491-5p 1 0 0
chr17:41769082|41769437 hsa-miR-3180-3p 1 0 0
chr17:41769082|41769437 hsa-miR-6782-5p 1 0 0
chr17:41769082|41769437 hsa-miR-6821-5p 1 1 0
chr17:41769082|41769437 hsa-miR-6786-5p 1 0 0
chr17:41769082|41769437 hsa-miR-4763-5p 1 1 0
chr17:41769082|41769437 hsa-miR-1247-5p 1 0 0
chr17:41769082|41769437 hsa-miR-2277-3p 0 1 0
chr17:41769082|41769437 hsa-miR-3127-5p 0 1 0
chr17:41769082|41769437 hsa-miR-1908-5p 1 1 0
chr17:41769082|41769437 hsa-miR-7113-3p 1 1 0
chr17:41769082|41769437 hsa-miR-1228-5p 1 0 0
chr17:41769082|41769437 hsa-miR-6771-5p 1 0 0
chr17:41769082|41769437 hsa-miR-7111-3p 1 0 0
chr17:41769082|41769437 hsa-miR-4667-3p 1 1 0
chr17:41769082|41769437 hsa-miR-7160-3p 0 1 0
chr17:41769082|41769437 hsa-miR-3191-3p 1 1 0
chr17:41769082|41769437 hsa-miR-1236-3p 1 0 0
chr17:41769082|41769437 hsa-miR-7106-3p 0 1 0
chr17:41769082|41769437 hsa-miR-6828-3p 1 1 0
chr17:41769082|41769437 hsa-miR-6867-3p 0 1 0
chr17:41769082|41769437 hsa-miR-6887-3p 1 0 0
chr17:41769082|41769437 hsa-miR-1224-3p 1 0 0
chr17:41769082|41769437 hsa-miR-4774-5p 0 1 0
chr17:41769082|41769437 hsa-miR-6741-3p 1 0 0
chr17:41769082|41769437 hsa-miR-6752-3p 0 1 0
chr17:41769082|41769437 hsa-miR-6826-3p 1 1 0
chr17:41769082|41769437 hsa-miR-4749-3p 1 0 0
chr17:41769082|41769437 hsa-miR-4649-3p 1 0 0
chr17:41769082|41769437 hsa-miR-2277-5p 1 0 0
chr17:41769082|41769437 hsa-miR-6734-3p 1 1 0
chr17:41769082|41769437 hsa-miR-1249-3p 1 0 0
chr17:41769082|41769437 hsa-miR-6759-3p 1 0 0
chr17:41769082|41769437 hsa-miR-6800-3p 1 0 0
chr17:41769082|41769437 hsa-miR-3162-3p 1 0 0
chr17:41769082|41769437 hsa-miR-5007-5p 0 1 0
chr17:41769082|41769437 hsa-miR-5587-5p 0 1 0
chr17:41769082|41769437 hsa-miR-196b-3p 0 1 0
chr17:41769082|41769437 hsa-miR-10400-5p 1 0 0
chr17:41769082|41769437 hsa-miR-4763-3p 1 1 0
chr17:41769082|41769437 hsa-miR-6787-5p 1 1 0
chr17:41769082|41769437 hsa-miR-6816-5p 1 1 0
chr17:41769082|41769437 hsa-miR-6893-5p 1 1 0
chr17:41769082|41769437 hsa-miR-6743-5p 1 0 0
chr17:41769082|41769437 hsa-miR-6756-5p 1 0 0
chr17:41769082|41769437 hsa-miR-6819-5p 1 0 0
chr17:41769082|41769437 hsa-miR-6722-3p 1 1 0
chr17:41769082|41769437 hsa-miR-6797-5p 1 0 0
chr17:41769082|41769437 hsa-miR-6808-5p 1 1 0
chr17:41769082|41769437 hsa-miR-6879-5p 1 0 0
chr17:41769082|41769437 hsa-miR-7111-5p 1 0 0
chr17:41769082|41769437 hsa-miR-3127-3p 0 1 0
chr17:41769082|41769437 hsa-miR-4685-3p 1 1 0
chr17:41769082|41769437 hsa-miR-4728-5p 0 1 0
chr17:41769082|41769437 hsa-miR-10396b-5p 1 1 0
chr17:41769082|41769437 hsa-miR-1909-3p 1 1 0
chr17:41769082|41769437 hsa-miR-328-5p 1 0 0
chr17:41769082|41769437 hsa-miR-4632-5p 1 0 0
chr17:41769082|41769437 hsa-miR-4649-5p 1 1 0
chr17:41769082|41769437 hsa-miR-4749-5p 1 0 0
chr17:41769082|41769437 hsa-miR-6729-5p 1 1 0
chr17:41769082|41769437 hsa-miR-6795-5p 1 0 0
chr17:41769082|41769437 hsa-miR-6848-5p 1 0 0
chr17:41769082|41769437 hsa-miR-6858-5p 0 1 0
chr17:41769082|41769437 hsa-miR-6731-5p 0 1 0
chr17:41769082|41769437 hsa-miR-1914-3p 1 0 0
chr17:41769082|41769437 hsa-miR-6791-3p 0 1 0
chr17:41769082|41769437 hsa-miR-4722-3p 1 0 0
chr17:41769082|41769437 hsa-miR-6756-3p 1 1 0
chr17:41769082|41769437 hsa-miR-6805-3p 1 0 0
chr17:41769082|41769437 hsa-miR-6810-3p 1 0 0
chr17:41769082|41769437 hsa-miR-4723-3p 1 1 0
chr17:41769082|41769437 hsa-miR-6769b-3p 0 1 0
chr17:41769082|41769437 hsa-miR-6797-3p 1 0 0
chr17:41769082|41769437 hsa-miR-6834-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:41769082|41769437
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence MTQTLPCVMSLTGALLSSVEGYPGLSLVLTSPPLPLPSRWW
Nucleotide Sequence ATGACCCAGACTCTCCCGTGTGTGATGAGTCTGACTGGGGCCCTCCTCAGCTCTGTGGAAGGGTATCCCGGCCTCTCCTTAGTGCTCACGTCCCCGCCCCTGCCTTTGCCCTCCAGGTGGTGGTGA

CircID chr17:41769082|41769437
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MLGWGLGREGREQMSSGEGHCRGGGRL
Nucleotide Sequence CTGCTAGGGTGGGGGCTGGGCAGGGAGGGGAGAGAGCAGATGTCCTCAGGGGAGGGACATTGTAGGGGTGGAGGGAGGTTATGA

CircID chr17:41769082|41769437
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MIVNQLSKKEASRRALMGSPQLVAAVVRTMQNTSD
Nucleotide Sequence ATGATTGTGAACCAGCTGTCGAAGAAGGAGGCGTCGCGGCGGGCCCTGATGGGCTCGCCCCAGCTGGTGGCCGCTGTCGTGCGTACCATGCAGAATACCAGCGAC

CircID chr17:41769082|41769437
ORF Type ORF4
Protein Length 114
Nucleotide Length 342
Protein Sequence MHGTHDSGHQLGRAHQGPPRRLLLRQLVHNHGRLGHHHLEGKGRGGDVSTKERPGYPSTELRRAPVRLITHGRVWVITSLHPYNVPPLRTSALSPPCPAPTLAGTLTDRVLVVE
Nucleotide Sequence CTGCATGGTACGCACGACAGCGGCCACCAGCTGGGGCGAGCCCATCAGGGCCCGCCGCGACGCCTCCTTCTTCGACAGCTGGTTCACAATCATGGCCGCCTTGGTCACCACCACCTGGAGGGCAAAGGCAGGGGCGGGGACGTGAGCACTAAGGAGAGGCCGGGATACCCTTCCACAGAGCTGAGGAGGGCCCCAGTCAGACTCATCACACACGGGAGAGTCTGGGTCATAACCTCCCTCCACCCCTACAATGTCCCTCCCCTGAGGACATCTGCTCTCTCCCCTCCCTGCCCAGCCCCCACCCTAGCAGGGACCCTCACAGACCGGGTCCTCGTCGTTGAG

CircID chr17:41769082|41769437
ORF Type ORF5
Protein Length 50
Nucleotide Length 153
Protein Sequence MVFCMVRTTAATSWGEPIRARRDASFFDSWFTIMAALVTTTWRAKAGAGT
Nucleotide Sequence CTGGTATTCTGCATGGTACGCACGACAGCGGCCACCAGCTGGGGCGAGCCCATCAGGGCCCGCCGCGACGCCTCCTTCTTCGACAGCTGGTTCACAATCATGGCCGCCTTGGTCACCACCACCTGGAGGGCAAAGGCAGGGGCGGGGACGTGA

CircID chr17:41769082|41769437
ORF Type ORF6
Protein Length 39
Nucleotide Length 120
Protein Sequence MGHNLPPPLQCPSPEDICSLPSLPSPHPSRDPHRPGPRR
Nucleotide Sequence CTGGGTCATAACCTCCCTCCACCCCTACAATGTCCCTCCCCTGAGGACATCTGCTCTCTCCCCTCCCTGCCCAGCCCCCACCCTAGCAGGGACCCTCACAGACCGGGTCCTCGTCGTTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites