CircRNA Information

General Information
circRNA Basic Information
CircID chr17:41974377|41974664
Strand +
CircType exon
Host Gene ENSG00000173786.15;
Algorism CIRI2;
Sequence CTAGTTATGGTGTGAAGGGGAGGGGGCAGGGACTTAGGACCAAAGGTGGGAGGTAAGCTCCTTTTTCTACCCTGGTAAATAGCCCCAGCCTTCTTGGGGCTACACTGATTAAGAAATGGGATCACTCAGGAGGATTGCTTGAGCCCAGGAGTTCGAGGCTGCAGTGAGCCATGATCGCACCACTGCACTCCAGCTTGGGAAATAGCAGGACCCTGTCTCTAAAAACAAAGAAAAAAGACAAGGAGATGGAATCAAAGCCCAGAGGTCCTCCCCTTCTCAGAGCCACCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:41974377|41974664 hsa-miR-122-5p 0 0 1
chr17:41974377|41974664 hsa-miR-122-3p 0 0 1
chr17:41974377|41974664 hsa-miR-370-5p 0 0 1
chr17:41974377|41974664 hsa-miR-370-3p 0 0 1
chr17:41974377|41974664 hsa-miR-377-5p 0 0 1
chr17:41974377|41974664 hsa-miR-377-3p 0 0 1
chr17:41974377|41974664 hsa-miR-326 0 0 1
chr17:41974377|41974664 hsa-miR-133b 0 0 1
chr17:41974377|41974664 hsa-miR-511-5p 0 0 1
chr17:41974377|41974664 hsa-miR-511-3p 0 0 1
chr17:41974377|41974664 hsa-miR-612 0 0 1
chr17:41974377|41974664 hsa-miR-675-5p 0 0 1
chr17:41974377|41974664 hsa-miR-675-3p 0 0 1
chr17:41974377|41974664 hsa-miR-708-5p 0 0 1
chr17:41974377|41974664 hsa-miR-708-3p 0 0 1
chr17:41974377|41974664 hsa-miR-760 0 0 1
chr17:41974377|41974664 hsa-miR-1228-5p 0 0 1
chr17:41974377|41974664 hsa-miR-1228-3p 0 0 1
chr17:41974377|41974664 hsa-miR-1200 0 0 1
chr17:41974377|41974664 hsa-miR-1303 1 0 1
chr17:41974377|41974664 hsa-miR-1253 0 0 1
chr17:41974377|41974664 hsa-miR-532-3p 1 0 1
chr17:41974377|41974664 hsa-miR-1184 0 0 1
chr17:41974377|41974664 hsa-miR-1224-3p 1 0 1
chr17:41974377|41974664 hsa-miR-28-5p 0 0 1
chr17:41974377|41974664 hsa-miR-324-3p 0 0 1
chr17:41974377|41974664 hsa-miR-330-5p 0 0 1
chr17:41974377|41974664 hsa-miR-509-3-5p 0 0 1
chr17:41974377|41974664 hsa-miR-509-5p 0 0 1
chr17:41974377|41974664 hsa-miR-1260 0 0 1
chr17:41974377|41974664 hsa-miR-1280 0 0 1
chr17:41974377|41974664 hsa-miR-9 0 0 1
chr17:41974377|41974664 hsa-miR-1300 0 0 1
chr17:41974377|41974664 hsa-miR-1285 0 0 1
chr17:41974377|41974664 hsa-miR-24 0 0 1
chr17:41974377|41974664 hsa-miR-220a 0 0 1
chr17:41974377|41974664 hsa-miR-133a 0 0 1
chr17:41974377|41974664 hsa-miR-1245 0 0 1
chr17:41974377|41974664 hsa-miR-762 1 0 0
chr17:41974377|41974664 hsa-miR-1260a 1 0 0
chr17:41974377|41974664 hsa-miR-1913 1 0 0
chr17:41974377|41974664 hsa-miR-1260b 1 0 0
chr17:41974377|41974664 hsa-miR-3135b 1 0 0
chr17:41974377|41974664 hsa-miR-4706 1 0 0
chr17:41974377|41974664 hsa-miR-9898 1 0 0
chr17:41974377|41974664 hsa-miR-6747-3p 1 0 0
chr17:41974377|41974664 hsa-miR-6836-3p 1 0 0
chr17:41974377|41974664 hsa-miR-210-5p 1 0 0
chr17:41974377|41974664 hsa-miR-1225-3p 1 0 0
chr17:41974377|41974664 hsa-miR-769-5p 1 0 0
chr17:41974377|41974664 hsa-miR-6875-3p 1 0 0
chr17:41974377|41974664 hsa-miR-4725-5p 1 0 0
chr17:41974377|41974664 hsa-miR-6821-5p 1 0 0
chr17:41974377|41974664 hsa-miR-4713-5p 1 0 0
chr17:41974377|41974664 hsa-miR-6894-3p 1 0 0
chr17:41974377|41974664 hsa-miR-6803-3p 1 0 0
chr17:41974377|41974664 hsa-miR-7113-3p 1 0 0
chr17:41974377|41974664 hsa-miR-149-3p 1 0 0
chr17:41974377|41974664 hsa-miR-1304-3p 1 0 0
chr17:41974377|41974664 hsa-miR-1306-5p 1 0 0
chr17:41974377|41974664 hsa-miR-6752-3p 1 0 0
chr17:41974377|41974664 hsa-miR-598-5p 1 0 0
chr17:41974377|41974664 hsa-miR-1296-5p 1 0 0
chr17:41974377|41974664 hsa-miR-4649-3p 1 0 0
chr17:41974377|41974664 hsa-miR-3184-3p 1 0 0
chr17:41974377|41974664 hsa-miR-4433a-5p 1 0 0
chr17:41974377|41974664 hsa-miR-1229-3p 1 0 0
chr17:41974377|41974664 hsa-miR-6798-3p 1 0 0
chr17:41974377|41974664 hsa-miR-4433b-5p 1 0 0
chr17:41974377|41974664 hsa-miR-6759-3p 1 0 0
chr17:41974377|41974664 hsa-miR-4763-3p 1 0 0
chr17:41974377|41974664 hsa-miR-1343-5p 1 0 0
chr17:41974377|41974664 hsa-miR-4685-3p 1 0 0
chr17:41974377|41974664 hsa-miR-5196-5p 1 0 0
chr17:41974377|41974664 hsa-miR-939-5p 1 0 0
chr17:41974377|41974664 hsa-miR-1238-5p 1 0 0
chr17:41974377|41974664 hsa-miR-4758-5p 1 0 0
chr17:41974377|41974664 hsa-miR-1914-3p 1 0 0
chr17:41974377|41974664 hsa-miR-6790-5p 1 0 0
chr17:41974377|41974664 hsa-miR-4722-3p 1 0 0
chr17:41974377|41974664 hsa-miR-6727-3p 1 0 0
chr17:41974377|41974664 hsa-miR-6893-3p 1 0 0
chr17:41974377|41974664 hsa-miR-6819-3p 1 0 0
chr17:41974377|41974664 hsa-miR-4769-3p 1 0 0
chr17:41974377|41974664 hsa-miR-6814-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:41974377|41974664
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MVNSPSLLGATLIKKWDHSGGLLEPRSSRLQ
Nucleotide Sequence CTGGTAAATAGCCCCAGCCTTCTTGGGGCTACACTGATTAAGAAATGGGATCACTCAGGAGGATTGCTTGAGCCCAGGAGTTCGAGGCTGCAGTGA
CircID chr17:41974377|41974664
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MIAPLHSSLGNSRTLSLKTKKKDKEMESKPRGPPLLRAT
Nucleotide Sequence ATGATCGCACCACTGCACTCCAGCTTGGGAAATAGCAGGACCCTGTCTCTAAAAACAAAGAAAAAAGACAAGGAGATGGAATCAAAGCCCAGAGGTCCTCCCCTTCTCAGAGCCACC
CircID chr17:41974377|41974664
ORF Type ORF3
Protein Length 48
Nucleotide Length 147
Protein Sequence MIPSPCLFSLFLETGSCYFPSWSAVVRSWLTAASNSWAQAILLSDPIS
Nucleotide Sequence TTGATTCCATCTCCTTGTCTTTTTTCTTTGTTTTTAGAGACAGGGTCCTGCTATTTCCCAAGCTGGAGTGCAGTGGTGCGATCATGGCTCACTGCAGCCTCGAACTCCTGGGCTCAAGCAATCCTCCTGAGTGATCCCATTTCTTAA
CircID chr17:41974377|41974664
ORF Type ORF4
Protein Length 52
Nucleotide Length 159
Protein Sequence MRRGGPLGFDSISLSFFFVFRDRVLLFPKLECSGAIMAHCSLELLGSSNPPE
Nucleotide Sequence CTGAGAAGGGGAGGACCTCTGGGCTTTGATTCCATCTCCTTGTCTTTTTTCTTTGTTTTTAGAGACAGGGTCCTGCTATTTCCCAAGCTGGAGTGCAGTGGTGCGATCATGGCTCACTGCAGCCTCGAACTCCTGGGCTCAAGCAATCCTCCTGAGTGA
CircID chr17:41974377|41974664
ORF Type ORF5
Protein Length 27
Nucleotide Length 84
Protein Sequence MGLFTRVEKGAYLPPLVLSPCPLPFTP
Nucleotide Sequence CTGGGGCTATTTACCAGGGTAGAAAAAGGAGCTTACCTCCCACCTTTGGTCCTAAGTCCCTGCCCCCTCCCCTTCACACCATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab