CircRNA Information

General Information
circRNA Basic Information
CircID chr17:42192532|42192681
Strand +
CircType exon
Host Gene ENSG00000167925.14;
Algorism CIRI2;
Sequence GCACTGCCCGTGTGACGCTTACATCCCCTTGGCCCCGACCCCTGCCTTGGCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCTGCTGCTGGACGCACTGAGGTCCCCAGGGCTGAGGGCACTGGAGG
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:42192532|42192681 hsa-miR-15a-5p 0 0 1
chr17:42192532|42192681 hsa-miR-15a-3p 0 0 1
chr17:42192532|42192681 hsa-miR-148a-5p 0 0 1
chr17:42192532|42192681 hsa-miR-148a-3p 0 0 1
chr17:42192532|42192681 hsa-miR-34a-5p 0 0 1
chr17:42192532|42192681 hsa-miR-34a-3p 0 0 1
chr17:42192532|42192681 hsa-miR-214-5p 0 0 1
chr17:42192532|42192681 hsa-miR-214-3p 0 0 1
chr17:42192532|42192681 hsa-miR-15b-5p 0 0 1
chr17:42192532|42192681 hsa-miR-15b-3p 0 0 1
chr17:42192532|42192681 hsa-miR-152-5p 0 0 1
chr17:42192532|42192681 hsa-miR-152-3p 0 0 1
chr17:42192532|42192681 hsa-miR-195-5p 0 0 1
chr17:42192532|42192681 hsa-miR-195-3p 0 0 1
chr17:42192532|42192681 hsa-miR-148b-5p 0 0 1
chr17:42192532|42192681 hsa-miR-148b-3p 0 0 1
chr17:42192532|42192681 hsa-miR-424-5p 0 0 1
chr17:42192532|42192681 hsa-miR-424-3p 0 0 1
chr17:42192532|42192681 hsa-miR-449a 0 0 1
chr17:42192532|42192681 hsa-miR-497-5p 0 0 1
chr17:42192532|42192681 hsa-miR-497-3p 0 0 1
chr17:42192532|42192681 hsa-miR-602 0 0 1
chr17:42192532|42192681 hsa-miR-449b-5p 0 0 1
chr17:42192532|42192681 hsa-miR-449b-3p 0 0 1
chr17:42192532|42192681 hsa-miR-659-5p 0 0 1
chr17:42192532|42192681 hsa-miR-659-3p 0 0 1
chr17:42192532|42192681 hsa-miR-940 1 0 1
chr17:42192532|42192681 hsa-miR-1182 0 0 1
chr17:42192532|42192681 hsa-miR-1825 0 1 1
chr17:42192532|42192681 hsa-miR-199a-5p 0 0 1
chr17:42192532|42192681 hsa-miR-1224-3p 0 0 1
chr17:42192532|42192681 hsa-miR-199b-5p 0 0 1
chr17:42192532|42192681 hsa-miR-338-3p 0 0 1
chr17:42192532|42192681 hsa-miR-1207-5p 1 1 1
chr17:42192532|42192681 hsa-miR-342-5p 0 1 1
chr17:42192532|42192681 hsa-miR-34c-5p 0 0 1
chr17:42192532|42192681 hsa-miR-886-5p 0 0 1
chr17:42192532|42192681 hsa-miR-16 0 0 1
chr17:42192532|42192681 hsa-miR-637 1 0 0
chr17:42192532|42192681 hsa-miR-638 1 0 0
chr17:42192532|42192681 hsa-miR-762 1 0 0
chr17:42192532|42192681 hsa-miR-1469 1 0 0
chr17:42192532|42192681 hsa-miR-3621 1 0 0
chr17:42192532|42192681 hsa-miR-3649 0 1 0
chr17:42192532|42192681 hsa-miR-4448 1 0 0
chr17:42192532|42192681 hsa-miR-4734 1 0 0
chr17:42192532|42192681 hsa-miR-7704 0 1 0
chr17:42192532|42192681 hsa-miR-8089 1 0 0
chr17:42192532|42192681 hsa-miR-512-5p 0 1 0
chr17:42192532|42192681 hsa-miR-1972 0 1 0
chr17:42192532|42192681 hsa-miR-1227-5p 1 0 0
chr17:42192532|42192681 hsa-miR-6089 1 0 0
chr17:42192532|42192681 hsa-miR-4722-5p 1 0 0
chr17:42192532|42192681 hsa-miR-6820-5p 1 0 0
chr17:42192532|42192681 hsa-miR-6727-5p 1 1 0
chr17:42192532|42192681 hsa-miR-6806-5p 1 0 0
chr17:42192532|42192681 hsa-miR-874-3p 1 0 0
chr17:42192532|42192681 hsa-miR-6798-5p 1 0 0
chr17:42192532|42192681 hsa-miR-6782-5p 1 0 0
chr17:42192532|42192681 hsa-miR-6852-5p 0 1 0
chr17:42192532|42192681 hsa-miR-4640-5p 1 0 0
chr17:42192532|42192681 hsa-miR-92b-5p 1 0 0
chr17:42192532|42192681 hsa-miR-3925-3p 0 1 0
chr17:42192532|42192681 hsa-miR-6877-5p 1 1 0
chr17:42192532|42192681 hsa-miR-7160-3p 0 1 0
chr17:42192532|42192681 hsa-miR-664b-5p 1 1 0
chr17:42192532|42192681 hsa-miR-4763-3p 1 1 0
chr17:42192532|42192681 hsa-miR-6893-5p 0 1 0
chr17:42192532|42192681 hsa-miR-6775-5p 1 0 0
chr17:42192532|42192681 hsa-miR-6752-5p 1 0 0
chr17:42192532|42192681 hsa-miR-6722-3p 1 1 0
chr17:42192532|42192681 hsa-miR-6808-5p 0 1 0
chr17:42192532|42192681 hsa-miR-6836-5p 1 1 0
chr17:42192532|42192681 hsa-miR-10396b-5p 1 1 0
chr17:42192532|42192681 hsa-miR-1237-5p 1 0 0
chr17:42192532|42192681 hsa-miR-1909-3p 1 1 0
chr17:42192532|42192681 hsa-miR-4685-5p 0 1 0
chr17:42192532|42192681 hsa-miR-939-5p 1 0 0
chr17:42192532|42192681 hsa-miR-3940-5p 1 0 0
chr17:42192532|42192681 hsa-miR-4664-5p 0 1 0
chr17:42192532|42192681 hsa-miR-6791-5p 1 0 0
chr17:42192532|42192681 hsa-miR-769-3p 1 0 0
chr17:42192532|42192681 hsa-miR-33b-3p 1 0 0
chr17:42192532|42192681 hsa-miR-6764-5p 0 1 0
chr17:42192532|42192681 hsa-miR-6838-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:42192532|42192681
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MPWPGNTLGQVGTPGTKDPRALLLDALRSPGLRALE
Nucleotide Sequence CTGCCTTGGCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCTGCTGCTGGACGCACTGAGGTCCCCAGGGCTGAGGGCACTGGAG
CircID chr17:42192532|42192681
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MVPGVPTWPRVFPGQGRGRGQGDVSVTRAV
Nucleotide Sequence TTGGTTCCAGGGGTGCCCACCTGGCCCAGGGTATTCCCAGGCCAAGGCAGGGGTCGGGGCCAAGGGGATGTAAGCGTCACACGGGCAGTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab