CircNet

General Information

circRNA Basic Information

CircID	chr17:42313568\|42313725
Strand	+
CircType	exon
Host Gene	ENSG00000168610.13;
Algorism	CIRI2;
Sequence	CTAGGGCGAGGGTTCAGGGCTTCTCTGGAGCAGATATTGTCAAGTTCATGGCCTTAGGTAGCATGTATCTGGTCTTAACTCTGATTGTAGCAAAAGTTCTGAGAGGAGCTGAGCCCTGTTGTGGCCCATTAAAGAACAGGGTCCTCAGGCCCTGCCCG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:42313568\|42313725	hsa-miR-208a-5p	0	0	1
chr17:42313568\|42313725	hsa-miR-208a-3p	0	0	1
chr17:42313568\|42313725	hsa-miR-10a-5p	0	0	1
chr17:42313568\|42313725	hsa-miR-10a-3p	0	0	1
chr17:42313568\|42313725	hsa-miR-10b-5p	0	0	1
chr17:42313568\|42313725	hsa-miR-10b-3p	0	0	1
chr17:42313568\|42313725	hsa-miR-221-5p	0	0	1
chr17:42313568\|42313725	hsa-miR-221-3p	0	0	1
chr17:42313568\|42313725	hsa-miR-222-5p	0	0	1
chr17:42313568\|42313725	hsa-miR-222-3p	0	0	1
chr17:42313568\|42313725	hsa-miR-504-5p	0	0	1
chr17:42313568\|42313725	hsa-miR-504-3p	0	0	1
chr17:42313568\|42313725	hsa-miR-208b-5p	0	0	1
chr17:42313568\|42313725	hsa-miR-208b-3p	0	0	1
chr17:42313568\|42313725	hsa-miR-1249-5p	0	0	1
chr17:42313568\|42313725	hsa-miR-1249-3p	0	0	1
chr17:42313568\|42313725	hsa-miR-1224-5p	0	0	1
chr17:42313568\|42313725	hsa-miR-525-5p	0	0	1
chr17:42313568\|42313725	hsa-miR-767-3p	0	0	1
chr17:42313568\|42313725	hsa-miR-338-5p	0	0	1
chr17:42313568\|42313725	hsa-miR-1207-5p	0	0	1
chr17:42313568\|42313725	hsa-miR-520a-5p	0	1	1
chr17:42313568\|42313725	hsa-miR-1274b	0	0	1
chr17:42313568\|42313725	hsa-miR-24	0	0	1
chr17:42313568\|42313725	hsa-miR-499-5p	0	0	1
chr17:42313568\|42313725	hsa-miR-663a	1	0	0
chr17:42313568\|42313725	hsa-miR-762	1	0	0
chr17:42313568\|42313725	hsa-miR-544b	0	1	0
chr17:42313568\|42313725	hsa-miR-4268	0	1	0
chr17:42313568\|42313725	hsa-miR-6132	0	1	0
chr17:42313568\|42313725	hsa-miR-7976	0	1	0
chr17:42313568\|42313725	hsa-miR-27a-5p	1	1	0
chr17:42313568\|42313725	hsa-miR-187-5p	0	1	0
chr17:42313568\|42313725	hsa-miR-24-3p	0	1	0
chr17:42313568\|42313725	hsa-miR-6721-5p	0	1	0
chr17:42313568\|42313725	hsa-miR-345-3p	0	1	0
chr17:42313568\|42313725	hsa-miR-5088-5p	0	1	0
chr17:42313568\|42313725	hsa-miR-6803-3p	0	1	0
chr17:42313568\|42313725	hsa-miR-6736-3p	0	1	0
chr17:42313568\|42313725	hsa-miR-6781-5p	1	0	0
chr17:42313568\|42313725	hsa-miR-7112-5p	0	1	0
chr17:42313568\|42313725	hsa-miR-1910-5p	1	0	0
chr17:42313568\|42313725	hsa-miR-744-5p	1	0	0
chr17:42313568\|42313725	hsa-miR-6779-3p	0	1	0
chr17:42313568\|42313725	hsa-miR-4763-3p	1	1	0
chr17:42313568\|42313725	hsa-miR-6775-5p	1	0	0
chr17:42313568\|42313725	hsa-miR-4726-5p	1	0	0
chr17:42313568\|42313725	hsa-miR-6848-5p	1	0	0
chr17:42313568\|42313725	hsa-miR-6806-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:42313568\|42313725
ORF Type	ORF1
Protein Length	37
Nucleotide Length	111
Protein Sequence	MALGSMYLVLTLIVAKVLRGAEPCCGPLKNRVLRPCP
Nucleotide Sequence	ATGGCCTTAGGTAGCATGTATCTGGTCTTAACTCTGATTGTAGCAAAAGTTCTGAGAGGAGCTGAGCCCTGTTGTGGCCCATTAAAGAACAGGGTCCTCAGGCCCTGCCCG

CircID	chr17:42313568\|42313725
ORF Type	ORF2
Protein Length	44
Nucleotide Length	135
Protein Sequence	MRTLFFNGPQQGSAPLRTFATIRVKTRYMLPKAMNLTISAPEKP
Nucleotide Sequence	CTGAGGACCCTGTTCTTTAATGGGCCACAACAGGGCTCAGCTCCTCTCAGAACTTTTGCTACAATCAGAGTTAAGACCAGATACATGCTACCTAAGGCCATGAACTTGACAATATCTGCTCCAGAGAAGCCCTGA

CircID	chr17:42313568\|42313725
ORF Type	ORF3
Protein Length	27
Nucleotide Length	84
Protein Sequence	MGHNRAQLLSELLLQSELRPDTCYLRP
Nucleotide Sequence	ATGGGCCACAACAGGGCTCAGCTCCTCTCAGAACTTTTGCTACAATCAGAGTTAAGACCAGATACATGCTACCTAAGGCCATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information