CircRNA Information

General Information
circRNA Basic Information
CircID chr17:42326116|42329440
Strand -
CircType exon
Host Gene ENSG00000168610.13;
Algorism CIRI2;
Sequence CTCTAGGTCAATCTTGAGGCCTTGGTGATACACCTCGGTCTCAAAGGTGATCAGGTGCAGCTCCTCAGTCACAATCAGGGAAGCATCACAATTGGCTCGGCCCCCATTCCCACAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:42326116|42329440 hsa-miR-192-5p 0 0 1
chr17:42326116|42329440 hsa-miR-192-3p 0 0 1
chr17:42326116|42329440 hsa-miR-215-5p 0 0 1
chr17:42326116|42329440 hsa-miR-215-3p 0 0 1
chr17:42326116|42329440 hsa-miR-134-5p 0 0 1
chr17:42326116|42329440 hsa-miR-134-3p 0 0 1
chr17:42326116|42329440 hsa-miR-558 0 0 1
chr17:42326116|42329440 hsa-miR-758-5p 0 0 1
chr17:42326116|42329440 hsa-miR-758-3p 0 0 1
chr17:42326116|42329440 hsa-miR-708-5p 0 0 1
chr17:42326116|42329440 hsa-miR-708-3p 0 0 1
chr17:42326116|42329440 hsa-miR-769-5p 0 0 1
chr17:42326116|42329440 hsa-miR-615-3p 0 0 1
chr17:42326116|42329440 hsa-miR-299-3p 0 0 1
chr17:42326116|42329440 hsa-miR-28-5p 0 0 1
chr17:42326116|42329440 hsa-miR-125a-5p 0 0 1
chr17:42326116|42329440 hsa-miR-508-3p 0 0 1
chr17:42326116|42329440 hsa-miR-516a-3p 0 0 1
chr17:42326116|42329440 hsa-miR-1274a 0 0 1
chr17:42326116|42329440 hsa-miR-125b 0 0 1
chr17:42326116|42329440 hsa-miR-219-5p 0 0 1
chr17:42326116|42329440 hsa-miR-637 1 0 0
chr17:42326116|42329440 hsa-miR-762 1 0 0
chr17:42326116|42329440 hsa-miR-4447 1 0 0
chr17:42326116|42329440 hsa-miR-4488 1 0 0
chr17:42326116|42329440 hsa-miR-4508 1 0 0
chr17:42326116|42329440 hsa-miR-4654 1 0 0
chr17:42326116|42329440 hsa-miR-4656 1 0 0
chr17:42326116|42329440 hsa-miR-5698 1 0 0
chr17:42326116|42329440 hsa-miR-6085 1 0 0
chr17:42326116|42329440 hsa-miR-6127 1 0 0
chr17:42326116|42329440 hsa-miR-7974 1 0 0
chr17:42326116|42329440 hsa-miR-9899 1 0 0
chr17:42326116|42329440 hsa-miR-4433b-3p 1 0 0
chr17:42326116|42329440 hsa-miR-128-1-5p 1 0 0
chr17:42326116|42329440 hsa-miR-6857-5p 1 0 0
chr17:42326116|42329440 hsa-miR-27a-5p 1 0 0
chr17:42326116|42329440 hsa-miR-6089 1 0 0
chr17:42326116|42329440 hsa-miR-6757-5p 1 0 0
chr17:42326116|42329440 hsa-miR-6759-5p 1 0 0
chr17:42326116|42329440 hsa-miR-6716-5p 1 0 0
chr17:42326116|42329440 hsa-miR-6871-5p 1 0 0
chr17:42326116|42329440 hsa-miR-1292-5p 1 0 0
chr17:42326116|42329440 hsa-miR-3180-3p 1 0 0
chr17:42326116|42329440 hsa-miR-6796-5p 1 0 0
chr17:42326116|42329440 hsa-miR-185-3p 1 0 0
chr17:42326116|42329440 hsa-miR-6835-5p 1 0 0
chr17:42326116|42329440 hsa-miR-7109-5p 1 0 0
chr17:42326116|42329440 hsa-miR-6877-5p 1 0 0
chr17:42326116|42329440 hsa-miR-1233-5p 1 0 0
chr17:42326116|42329440 hsa-miR-6778-5p 1 0 0
chr17:42326116|42329440 hsa-miR-6816-5p 1 0 0
chr17:42326116|42329440 hsa-miR-3180 1 0 0
chr17:42326116|42329440 hsa-miR-6803-5p 1 0 0
chr17:42326116|42329440 hsa-miR-6813-5p 1 0 0
chr17:42326116|42329440 hsa-miR-6842-5p 1 0 0
chr17:42326116|42329440 hsa-miR-6751-5p 1 0 0
chr17:42326116|42329440 hsa-miR-10526-3p 1 0 0
chr17:42326116|42329440 hsa-miR-1237-5p 1 0 0
chr17:42326116|42329440 hsa-miR-6846-5p 1 0 0
chr17:42326116|42329440 hsa-miR-6848-5p 1 0 0
chr17:42326116|42329440 hsa-miR-4697-5p 1 0 0
chr17:42326116|42329440 hsa-miR-6845-5p 1 0 0
chr17:42326116|42329440 hsa-miR-939-5p 1 0 0
chr17:42326116|42329440 hsa-miR-4769-5p 1 0 0
chr17:42326116|42329440 hsa-miR-4665-5p 1 0 0
chr17:42326116|42329440 hsa-miR-6762-5p 1 0 0
chr17:42326116|42329440 hsa-miR-6884-5p 1 0 0
chr17:42326116|42329440 hsa-miR-135a-2-3p 1 0 0
chr17:42326116|42329440 hsa-miR-128-2-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:42326116|42329440
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MVIHLGLKGDQVQLLSHNQGSITIGSAPIPT
Nucleotide Sequence TTGGTGATACACCTCGGTCTCAAAGGTGATCAGGTGCAGCTCCTCAGTCACAATCAGGGAAGCATCACAATTGGCTCGGCCCCCATTCCCACA
CircID chr17:42326116|42329440
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MIVTEELHLITFETEVYHQGLKIDLE
Nucleotide Sequence CTGATTGTGACTGAGGAGCTGCACCTGATCACCTTTGAGACCGAGGTGTATCACCAAGGCCTCAAGATTGACCTAGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab