CircRNA Information

General Information
circRNA Basic Information
CircID chr17:42404034|42404168
Strand -
CircType exon
Host Gene ENSG00000177469.12;
Algorism CIRI2;
Sequence ATGCATGTCGTTCCCCACCCCTCCTTCCCAGGGCTTCTCTTGGCTCCAGCGTTCCTCTGGGACCCTCTGCAGATACAGCCTGTGCTGGACCCCCAGCCAGGGTGAGGGCTCATTCTGCTCTGTCTTCCCCACTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:42404034|42404168 hsa-miR-608 1 0 1
chr17:42404034|42404168 hsa-miR-637 1 1 1
chr17:42404034|42404168 hsa-miR-1205 0 0 1
chr17:42404034|42404168 hsa-miR-1292-5p 0 0 1
chr17:42404034|42404168 hsa-miR-1292-3p 0 0 1
chr17:42404034|42404168 hsa-miR-1225-3p 0 0 1
chr17:42404034|42404168 hsa-miR-491-5p 0 1 1
chr17:42404034|42404168 hsa-miR-615-5p 0 0 1
chr17:42404034|42404168 hsa-miR-1184 0 0 1
chr17:42404034|42404168 hsa-miR-338-3p 0 0 1
chr17:42404034|42404168 hsa-miR-1233 0 0 1
chr17:42404034|42404168 hsa-miR-7 0 0 1
chr17:42404034|42404168 hsa-miR-638 1 0 0
chr17:42404034|42404168 hsa-miR-658 1 0 0
chr17:42404034|42404168 hsa-miR-1182 1 1 0
chr17:42404034|42404168 hsa-miR-1203 1 0 0
chr17:42404034|42404168 hsa-miR-2110 0 1 0
chr17:42404034|42404168 hsa-miR-2278 0 1 0
chr17:42404034|42404168 hsa-miR-3125 0 1 0
chr17:42404034|42404168 hsa-miR-3137 1 0 0
chr17:42404034|42404168 hsa-miR-3141 1 0 0
chr17:42404034|42404168 hsa-miR-3154 1 0 0
chr17:42404034|42404168 hsa-miR-3185 1 0 0
chr17:42404034|42404168 hsa-miR-4271 1 1 0
chr17:42404034|42404168 hsa-miR-4281 1 0 0
chr17:42404034|42404168 hsa-miR-3936 1 0 0
chr17:42404034|42404168 hsa-miR-4449 1 0 0
chr17:42404034|42404168 hsa-miR-3135b 0 1 0
chr17:42404034|42404168 hsa-miR-4468 0 1 0
chr17:42404034|42404168 hsa-miR-4476 1 0 0
chr17:42404034|42404168 hsa-miR-4488 1 0 0
chr17:42404034|42404168 hsa-miR-4516 1 0 0
chr17:42404034|42404168 hsa-miR-4533 1 1 0
chr17:42404034|42404168 hsa-miR-4651 0 1 0
chr17:42404034|42404168 hsa-miR-4721 1 0 0
chr17:42404034|42404168 hsa-miR-4739 1 1 0
chr17:42404034|42404168 hsa-miR-5194 1 1 0
chr17:42404034|42404168 hsa-miR-5703 1 0 0
chr17:42404034|42404168 hsa-miR-5787 1 0 0
chr17:42404034|42404168 hsa-miR-6090 1 0 0
chr17:42404034|42404168 hsa-miR-6127 1 1 0
chr17:42404034|42404168 hsa-miR-6129 1 0 0
chr17:42404034|42404168 hsa-miR-6133 1 0 0
chr17:42404034|42404168 hsa-miR-6860 1 0 0
chr17:42404034|42404168 hsa-miR-8085 1 0 0
chr17:42404034|42404168 hsa-miR-8089 1 0 0
chr17:42404034|42404168 hsa-miR-12118 1 1 0
chr17:42404034|42404168 hsa-miR-12120 1 1 0
chr17:42404034|42404168 hsa-miR-4433b-3p 1 0 0
chr17:42404034|42404168 hsa-miR-92a-2-5p 0 1 0
chr17:42404034|42404168 hsa-miR-4731-5p 0 1 0
chr17:42404034|42404168 hsa-miR-671-5p 1 1 0
chr17:42404034|42404168 hsa-miR-6861-5p 1 0 0
chr17:42404034|42404168 hsa-miR-7106-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6825-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6799-5p 1 0 0
chr17:42404034|42404168 hsa-miR-7851-3p 1 0 0
chr17:42404034|42404168 hsa-miR-5187-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6757-5p 1 0 0
chr17:42404034|42404168 hsa-miR-4695-5p 1 0 0
chr17:42404034|42404168 hsa-miR-505-5p 0 1 0
chr17:42404034|42404168 hsa-miR-3928-3p 1 1 0
chr17:42404034|42404168 hsa-miR-874-3p 1 0 0
chr17:42404034|42404168 hsa-miR-6742-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6748-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6732-5p 1 0 0
chr17:42404034|42404168 hsa-miR-3126-5p 1 0 0
chr17:42404034|42404168 hsa-miR-2467-3p 1 1 0
chr17:42404034|42404168 hsa-miR-6782-5p 1 1 0
chr17:42404034|42404168 hsa-miR-6786-5p 1 0 0
chr17:42404034|42404168 hsa-miR-204-3p 1 1 0
chr17:42404034|42404168 hsa-miR-1229-5p 1 0 0
chr17:42404034|42404168 hsa-miR-296-3p 1 0 0
chr17:42404034|42404168 hsa-miR-6847-5p 1 1 0
chr17:42404034|42404168 hsa-miR-4787-5p 1 0 0
chr17:42404034|42404168 hsa-miR-4446-3p 1 0 0
chr17:42404034|42404168 hsa-miR-149-3p 1 0 0
chr17:42404034|42404168 hsa-miR-3158-5p 1 0 0
chr17:42404034|42404168 hsa-miR-3189-3p 1 0 0
chr17:42404034|42404168 hsa-miR-423-5p 1 0 0
chr17:42404034|42404168 hsa-miR-4687-5p 0 1 0
chr17:42404034|42404168 hsa-miR-6501-3p 0 1 0
chr17:42404034|42404168 hsa-miR-4746-5p 1 1 0
chr17:42404034|42404168 hsa-miR-5004-5p 0 1 0
chr17:42404034|42404168 hsa-miR-1207-5p 1 0 0
chr17:42404034|42404168 hsa-miR-1233-5p 1 0 0
chr17:42404034|42404168 hsa-miR-4763-3p 1 0 0
chr17:42404034|42404168 hsa-miR-6769b-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6870-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6737-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6752-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6754-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6756-5p 1 1 0
chr17:42404034|42404168 hsa-miR-6803-5p 1 1 0
chr17:42404034|42404168 hsa-miR-6819-5p 1 0 0
chr17:42404034|42404168 hsa-miR-7110-5p 1 0 0
chr17:42404034|42404168 hsa-miR-11181-3p 1 0 0
chr17:42404034|42404168 hsa-miR-1249-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6722-3p 1 0 0
chr17:42404034|42404168 hsa-miR-6751-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6763-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6774-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6779-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6780a-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6797-5p 1 1 0
chr17:42404034|42404168 hsa-miR-6808-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6875-5p 1 0 0
chr17:42404034|42404168 hsa-miR-7111-5p 1 0 0
chr17:42404034|42404168 hsa-miR-4728-5p 1 0 0
chr17:42404034|42404168 hsa-miR-5196-5p 1 1 0
chr17:42404034|42404168 hsa-miR-6780b-5p 1 1 0
chr17:42404034|42404168 hsa-miR-10526-3p 1 0 0
chr17:42404034|42404168 hsa-miR-1237-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6738-5p 1 1 0
chr17:42404034|42404168 hsa-miR-6848-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6858-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6883-5p 1 0 0
chr17:42404034|42404168 hsa-miR-1910-3p 0 1 0
chr17:42404034|42404168 hsa-miR-6758-5p 1 0 0
chr17:42404034|42404168 hsa-miR-1914-3p 1 0 0
chr17:42404034|42404168 hsa-miR-4665-5p 0 1 0
chr17:42404034|42404168 hsa-miR-10398-3p 1 0 0
chr17:42404034|42404168 hsa-miR-4646-5p 1 1 0
chr17:42404034|42404168 hsa-miR-4747-5p 1 1 0
chr17:42404034|42404168 hsa-miR-6891-5p 1 1 0
chr17:42404034|42404168 hsa-miR-6785-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6791-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6762-5p 1 0 0
chr17:42404034|42404168 hsa-miR-6859-5p 1 1 0
chr17:42404034|42404168 hsa-miR-10394-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:42404034|42404168
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MHVVPHPSFPGLLLAPAFLWDPLQIQPVLDPQPG
Nucleotide Sequence ATGCATGTCGTTCCCCACCCCTCCTTCCCAGGGCTTCTCTTGGCTCCAGCGTTCCTCTGGGACCCTCTGCAGATACAGCCTGTGCTGGACCCCCAGCCAGGGTGA

CircID chr17:42404034|42404168
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MSFPTPPSQGFSWLQRSSGTLCRYSLCWTPSQGEGSFCSVFPT
Nucleotide Sequence ATGTCGTTCCCCACCCCTCCTTCCCAGGGCTTCTCTTGGCTCCAGCGTTCCTCTGGGACCCTCTGCAGATACAGCCTGTGCTGGACCCCCAGCCAGGGTGAGGGCTCATTCTGCTCTGTCTTCCCCACT

CircID chr17:42404034|42404168
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MGPSADTACAGPPARVRAHSALSSPL
Nucleotide Sequence CTGGGACCCTCTGCAGATACAGCCTGTGCTGGACCCCCAGCCAGGGTGAGGGCTCATTCTGCTCTGTCTTCCCCACTG

CircID chr17:42404034|42404168
ORF Type ORF4
Protein Length 32
Nucleotide Length 96
Protein Sequence MGVQHRLYLQRVPEERWSQEKPWEGGVGNDMH
Nucleotide Sequence CTGGGGGTCCAGCACAGGCTGTATCTGCAGAGGGTCCCAGAGGAACGCTGGAGCCAAGAGAAGCCCTGGGAAGGAGGGGTGGGGAACGACATGCAT

CircID chr17:42404034|42404168
ORF Type ORF5
Protein Length 37
Nucleotide Length 111
Protein Sequence MSPHPGWGSSTGCICRGSQRNAGAKRSPGKEGWGTTC
Nucleotide Sequence ATGAGCCCTCACCCTGGCTGGGGGTCCAGCACAGGCTGTATCTGCAGAGGGTCCCAGAGGAACGCTGGAGCCAAGAGAAGCCCTGGGAAGGAGGGGTGGGGAACGACATGC

CircID chr17:42404034|42404168
ORF Type ORF6
Protein Length 33
Nucleotide Length 99
Protein Sequence MAGGPAQAVSAEGPRGTLEPREALGRRGGERHA
Nucleotide Sequence CTGGCTGGGGGTCCAGCACAGGCTGTATCTGCAGAGGGTCCCAGAGGAACGCTGGAGCCAAGAGAAGCCCTGGGAAGGAGGGGTGGGGAACGACATGCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites