CircRNA Information

General Information
circRNA Basic Information
CircID chr17:42521719|42522089
Strand +
CircType exon
Host Gene ENSG00000033627.13;
Algorism CIRI2;
Sequence ACCCCTCCTGAGACCTGGGGCCAGTGTGGTGAGGAGGGGGCACTAGGGGCGGAGCCAGGCAGGCTGCAGGCAGAACCAAGAGGACCCCAGTCCCACACTGAAGACATCATGATTGGGGGTGGGGAAGATCTCAGGGTCTCCATCAGGGAAGAGCATCAGTCTGCACCCTCGGCCTGAGGGTGTGCTTGTGGGCAGGGCCCATGCAAGGCCTGGGAAGAAGCCAACCCCGAGAGAGGGAAGCCCTGTGCACTGCGGAGCAGCCAAGGCCTCTGTTCCAAGCATCCCGGCTGTGCTATGTAGTGCAGGGCATGAACGGGGAGAGAGGAAAGGATGGGAGTGCAGGGTGGGGTCAGAAAGGCGGTGTAGATATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:42521719|42522089 hsa-miR-197-5p 0 0 1
chr17:42521719|42522089 hsa-miR-197-3p 0 0 1
chr17:42521719|42522089 hsa-miR-148a-5p 0 0 1
chr17:42521719|42522089 hsa-miR-148a-3p 0 0 1
chr17:42521719|42522089 hsa-miR-152-5p 0 0 1
chr17:42521719|42522089 hsa-miR-152-3p 0 0 1
chr17:42521719|42522089 hsa-miR-149-5p 0 0 1
chr17:42521719|42522089 hsa-miR-149-3p 0 0 1
chr17:42521719|42522089 hsa-miR-376c-5p 0 0 1
chr17:42521719|42522089 hsa-miR-376c-3p 0 0 1
chr17:42521719|42522089 hsa-miR-148b-5p 0 0 1
chr17:42521719|42522089 hsa-miR-148b-3p 0 0 1
chr17:42521719|42522089 hsa-miR-433-5p 0 0 1
chr17:42521719|42522089 hsa-miR-433-3p 0 0 1
chr17:42521719|42522089 hsa-miR-193b-5p 0 0 1
chr17:42521719|42522089 hsa-miR-193b-3p 0 0 1
chr17:42521719|42522089 hsa-miR-519e-5p 0 0 1
chr17:42521719|42522089 hsa-miR-519e-3p 0 0 1
chr17:42521719|42522089 hsa-miR-504-5p 0 0 1
chr17:42521719|42522089 hsa-miR-504-3p 0 0 1
chr17:42521719|42522089 hsa-miR-596 1 1 1
chr17:42521719|42522089 hsa-miR-604 0 0 1
chr17:42521719|42522089 hsa-miR-647 0 0 1
chr17:42521719|42522089 hsa-miR-661 0 0 1
chr17:42521719|42522089 hsa-miR-659-5p 0 0 1
chr17:42521719|42522089 hsa-miR-659-3p 0 0 1
chr17:42521719|42522089 hsa-miR-874-5p 0 0 1
chr17:42521719|42522089 hsa-miR-874-3p 0 0 1
chr17:42521719|42522089 hsa-miR-1236-5p 0 0 1
chr17:42521719|42522089 hsa-miR-1236-3p 0 0 1
chr17:42521719|42522089 hsa-miR-1238-5p 0 0 1
chr17:42521719|42522089 hsa-miR-1238-3p 0 0 1
chr17:42521719|42522089 hsa-miR-1206 0 0 1
chr17:42521719|42522089 hsa-miR-1291 0 1 1
chr17:42521719|42522089 hsa-miR-1266-5p 0 0 1
chr17:42521719|42522089 hsa-miR-1266-3p 0 0 1
chr17:42521719|42522089 hsa-miR-296-5p 0 0 1
chr17:42521719|42522089 hsa-miR-615-5p 0 1 1
chr17:42521719|42522089 hsa-miR-146b-3p 0 0 1
chr17:42521719|42522089 hsa-miR-1184 1 1 1
chr17:42521719|42522089 hsa-miR-501-5p 0 0 1
chr17:42521719|42522089 hsa-miR-125a-5p 0 1 1
chr17:42521719|42522089 hsa-miR-515-3p 0 0 1
chr17:42521719|42522089 hsa-miR-193a-3p 0 1 1
chr17:42521719|42522089 hsa-miR-220b 0 0 1
chr17:42521719|42522089 hsa-miR-1274a 0 0 1
chr17:42521719|42522089 hsa-miR-125b 0 0 1
chr17:42521719|42522089 hsa-miR-642 0 0 1
chr17:42521719|42522089 hsa-miR-220c 0 0 1
chr17:42521719|42522089 hsa-miR-1254 0 0 1
chr17:42521719|42522089 hsa-miR-371-3p 0 0 1
chr17:42521719|42522089 hsa-miR-346 1 1 0
chr17:42521719|42522089 hsa-miR-572 1 0 0
chr17:42521719|42522089 hsa-miR-608 1 0 0
chr17:42521719|42522089 hsa-miR-636 1 0 0
chr17:42521719|42522089 hsa-miR-892b 0 1 0
chr17:42521719|42522089 hsa-miR-933 1 1 0
chr17:42521719|42522089 hsa-miR-1260a 1 0 0
chr17:42521719|42522089 hsa-miR-1539 1 0 0
chr17:42521719|42522089 hsa-miR-1913 1 0 0
chr17:42521719|42522089 hsa-miR-718 1 0 0
chr17:42521719|42522089 hsa-miR-3135a 1 0 0
chr17:42521719|42522089 hsa-miR-3142 0 1 0
chr17:42521719|42522089 hsa-miR-1260b 1 0 0
chr17:42521719|42522089 hsa-miR-3183 0 1 0
chr17:42521719|42522089 hsa-miR-3909 1 1 0
chr17:42521719|42522089 hsa-miR-4494 0 1 0
chr17:42521719|42522089 hsa-miR-4513 1 0 0
chr17:42521719|42522089 hsa-miR-4519 1 1 0
chr17:42521719|42522089 hsa-miR-4642 1 0 0
chr17:42521719|42522089 hsa-miR-4648 0 1 0
chr17:42521719|42522089 hsa-miR-4741 1 0 0
chr17:42521719|42522089 hsa-miR-5193 0 1 0
chr17:42521719|42522089 hsa-miR-5100 1 0 0
chr17:42521719|42522089 hsa-miR-5572 1 0 0
chr17:42521719|42522089 hsa-miR-6072 0 1 0
chr17:42521719|42522089 hsa-miR-7703 1 1 0
chr17:42521719|42522089 hsa-miR-8082 0 1 0
chr17:42521719|42522089 hsa-miR-103a-2-5p 0 1 0
chr17:42521719|42522089 hsa-miR-6749-3p 1 0 0
chr17:42521719|42522089 hsa-miR-214-5p 1 0 0
chr17:42521719|42522089 hsa-miR-18a-3p 0 1 0
chr17:42521719|42522089 hsa-miR-7155-5p 0 1 0
chr17:42521719|42522089 hsa-miR-6747-3p 1 1 0
chr17:42521719|42522089 hsa-miR-1273h-3p 0 1 0
chr17:42521719|42522089 hsa-miR-4726-3p 1 0 0
chr17:42521719|42522089 hsa-miR-212-5p 0 1 0
chr17:42521719|42522089 hsa-miR-6892-3p 1 0 0
chr17:42521719|42522089 hsa-miR-210-5p 1 1 0
chr17:42521719|42522089 hsa-miR-486-5p 1 0 0
chr17:42521719|42522089 hsa-miR-6728-5p 0 1 0
chr17:42521719|42522089 hsa-miR-6804-5p 0 1 0
chr17:42521719|42522089 hsa-miR-6089 1 0 0
chr17:42521719|42522089 hsa-miR-1301-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6875-3p 1 1 0
chr17:42521719|42522089 hsa-miR-6762-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6727-5p 1 0 0
chr17:42521719|42522089 hsa-miR-191-3p 1 0 0
chr17:42521719|42522089 hsa-let-7e-3p 1 0 0
chr17:42521719|42522089 hsa-miR-432-5p 0 1 0
chr17:42521719|42522089 hsa-miR-6849-3p 1 0 0
chr17:42521719|42522089 hsa-miR-7110-3p 1 1 0
chr17:42521719|42522089 hsa-miR-6841-3p 1 1 0
chr17:42521719|42522089 hsa-miR-6817-3p 1 0 0
chr17:42521719|42522089 hsa-miR-1915-5p 1 0 0
chr17:42521719|42522089 hsa-miR-6845-3p 0 1 0
chr17:42521719|42522089 hsa-miR-6772-5p 1 1 0
chr17:42521719|42522089 hsa-miR-4725-5p 1 1 0
chr17:42521719|42522089 hsa-miR-185-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6732-5p 1 0 0
chr17:42521719|42522089 hsa-miR-4793-3p 0 1 0
chr17:42521719|42522089 hsa-miR-4633-5p 1 0 0
chr17:42521719|42522089 hsa-miR-6728-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6858-3p 1 0 0
chr17:42521719|42522089 hsa-miR-4436b-5p 1 0 0
chr17:42521719|42522089 hsa-miR-6815-3p 1 0 0
chr17:42521719|42522089 hsa-miR-4763-5p 1 1 0
chr17:42521719|42522089 hsa-miR-7108-3p 1 0 0
chr17:42521719|42522089 hsa-miR-1247-5p 1 0 0
chr17:42521719|42522089 hsa-miR-6894-3p 1 1 0
chr17:42521719|42522089 hsa-miR-5001-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6757-3p 1 1 0
chr17:42521719|42522089 hsa-miR-7161-3p 0 1 0
chr17:42521719|42522089 hsa-miR-7113-3p 1 0 0
chr17:42521719|42522089 hsa-miR-4783-5p 1 0 0
chr17:42521719|42522089 hsa-miR-7111-3p 1 1 0
chr17:42521719|42522089 hsa-miR-6830-3p 1 1 0
chr17:42521719|42522089 hsa-miR-4787-5p 1 0 0
chr17:42521719|42522089 hsa-miR-6877-5p 1 1 0
chr17:42521719|42522089 hsa-miR-6870-3p 1 0 0
chr17:42521719|42522089 hsa-miR-3120-5p 1 0 0
chr17:42521719|42522089 hsa-miR-6785-3p 1 0 0
chr17:42521719|42522089 hsa-miR-3158-3p 0 1 0
chr17:42521719|42522089 hsa-miR-873-3p 1 0 0
chr17:42521719|42522089 hsa-miR-4758-3p 1 0 0
chr17:42521719|42522089 hsa-miR-4778-3p 0 1 0
chr17:42521719|42522089 hsa-miR-6867-3p 0 1 0
chr17:42521719|42522089 hsa-miR-1224-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6752-3p 1 1 0
chr17:42521719|42522089 hsa-miR-6837-3p 1 0 0
chr17:42521719|42522089 hsa-miR-4632-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6865-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6886-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6738-3p 1 1 0
chr17:42521719|42522089 hsa-miR-4749-3p 1 0 0
chr17:42521719|42522089 hsa-miR-3151-3p 1 0 0
chr17:42521719|42522089 hsa-miR-4649-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6880-3p 1 0 0
chr17:42521719|42522089 hsa-miR-3124-3p 1 1 0
chr17:42521719|42522089 hsa-miR-6857-3p 1 0 0
chr17:42521719|42522089 hsa-miR-130b-5p 1 1 0
chr17:42521719|42522089 hsa-miR-3620-3p 1 1 0
chr17:42521719|42522089 hsa-miR-1229-3p 0 1 0
chr17:42521719|42522089 hsa-miR-4750-3p 1 1 0
chr17:42521719|42522089 hsa-miR-3173-5p 1 1 0
chr17:42521719|42522089 hsa-miR-6734-3p 1 1 0
chr17:42521719|42522089 hsa-miR-3177-5p 1 0 0
chr17:42521719|42522089 hsa-miR-6846-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6812-3p 1 0 0
chr17:42521719|42522089 hsa-miR-1249-3p 1 0 0
chr17:42521719|42522089 hsa-miR-371b-3p 0 1 0
chr17:42521719|42522089 hsa-miR-6761-3p 1 0 0
chr17:42521719|42522089 hsa-miR-3200-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6732-3p 0 1 0
chr17:42521719|42522089 hsa-miR-6750-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6890-3p 1 0 0
chr17:42521719|42522089 hsa-miR-3162-3p 1 1 0
chr17:42521719|42522089 hsa-miR-3617-3p 1 0 0
chr17:42521719|42522089 hsa-miR-5002-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6813-5p 1 0 0
chr17:42521719|42522089 hsa-miR-10401-5p 0 1 0
chr17:42521719|42522089 hsa-miR-4685-3p 1 0 0
chr17:42521719|42522089 hsa-miR-3940-5p 1 0 0
chr17:42521719|42522089 hsa-miR-6799-3p 1 1 0
chr17:42521719|42522089 hsa-miR-1271-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6791-3p 1 0 0
chr17:42521719|42522089 hsa-miR-324-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6724-5p 0 1 0
chr17:42521719|42522089 hsa-miR-6791-5p 1 0 0
chr17:42521719|42522089 hsa-miR-6756-3p 0 1 0
chr17:42521719|42522089 hsa-miR-6784-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6862-3p 1 1 0
chr17:42521719|42522089 hsa-miR-6805-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6775-3p 0 1 0
chr17:42521719|42522089 hsa-miR-11181-5p 1 1 0
chr17:42521719|42522089 hsa-miR-3059-5p 1 1 0
chr17:42521719|42522089 hsa-miR-4723-3p 1 1 0
chr17:42521719|42522089 hsa-miR-6769b-3p 1 1 0
chr17:42521719|42522089 hsa-miR-7114-3p 1 0 0
chr17:42521719|42522089 hsa-miR-3085-3p 1 0 0
chr17:42521719|42522089 hsa-miR-10394-5p 1 0 0
chr17:42521719|42522089 hsa-miR-1234-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6827-3p 1 0 0
chr17:42521719|42522089 hsa-miR-103a-1-5p 0 1 0
chr17:42521719|42522089 hsa-miR-4769-3p 1 0 0
chr17:42521719|42522089 hsa-miR-6807-3p 1 0 0
chr17:42521719|42522089 hsa-miR-92b-3p 1 0 0
chr17:42521719|42522089 hsa-miR-4659b-3p 0 1 0
chr17:42521719|42522089 hsa-miR-151a-3p 0 1 0
chr17:42521719|42522089 hsa-miR-4659a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:42521719|42522089
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence MQAEPRGPQSHTEDIMIGGGEDLRVSIREEHQSAPSA
Nucleotide Sequence CTGCAGGCAGAACCAAGAGGACCCCAGTCCCACACTGAAGACATCATGATTGGGGGTGGGGAAGATCTCAGGGTCTCCATCAGGGAAGAGCATCAGTCTGCACCCTCGGCCTGA
CircID chr17:42521719|42522089
ORF Type ORF2
Protein Length 86
Nucleotide Length 258
Protein Sequence MGVGKISGSPSGKSISLHPRPEGVLVGRAHARPGKKPTPREGSPVHCGAAKASVPSIPAVLCSAGHERGERKGWECRVGSERRCRY
Nucleotide Sequence TTGGGGGTGGGGAAGATCTCAGGGTCTCCATCAGGGAAGAGCATCAGTCTGCACCCTCGGCCTGAGGGTGTGCTTGTGGGCAGGGCCCATGCAAGGCCTGGGAAGAAGCCAACCCCGAGAGAGGGAAGCCCTGTGCACTGCGGAGCAGCCAAGGCCTCTGTTCCAAGCATCCCGGCTGTGCTATGTAGTGCAGGGCATGAACGGGGAGAGAGGAAAGGATGGGAGTGCAGGGTGGGGTCAGAAAGGCGGTGTAGATAT
CircID chr17:42521719|42522089
ORF Type ORF3
Protein Length 66
Nucleotide Length 198
Protein Sequence MRVCLWAGPMQGLGRSQPREREALCTAEQPRPLFQASRLCYVVQGMNGERGKDGSAGWGQKGGVDI
Nucleotide Sequence CTGAGGGTGTGCTTGTGGGCAGGGCCCATGCAAGGCCTGGGAAGAAGCCAACCCCGAGAGAGGGAAGCCCTGTGCACTGCGGAGCAGCCAAGGCCTCTGTTCCAAGCATCCCGGCTGTGCTATGTAGTGCAGGGCATGAACGGGGAGAGAGGAAAGGATGGGAGTGCAGGGTGGGGTCAGAAAGGCGGTGTAGATATC
CircID chr17:42521719|42522089
ORF Type ORF4
Protein Length 65
Nucleotide Length 198
Protein Sequence MTPPCTPILSSLPVHALHYIAQPGCLEQRPWLLRSAQGFPLSGLASSQALHGPCPQAHPQAEGAD
Nucleotide Sequence CTGACCCCACCCTGCACTCCCATCCTTTCCTCTCTCCCCGTTCATGCCCTGCACTACATAGCACAGCCGGGATGCTTGGAACAGAGGCCTTGGCTGCTCCGCAGTGCACAGGGCTTCCCTCTCTCGGGGTTGGCTTCTTCCCAGGCCTTGCATGGGCCCTGCCCACAAGCACACCCTCAGGCCGAGGGTGCAGACTGA
CircID chr17:42521719|42522089
ORF Type ORF5
Protein Length 48
Nucleotide Length 144
Protein Sequence MMETLRSSPPPIMMSSVWDWGPLGSACSLPGSAPSAPSSPHWPQVSGG
Nucleotide Sequence CTGATGGAGACCCTGAGATCTTCCCCACCCCCAATCATGATGTCTTCAGTGTGGGACTGGGGTCCTCTTGGTTCTGCCTGCAGCCTGCCTGGCTCCGCCCCTAGTGCCCCCTCCTCACCACACTGGCCCCAGGTCTCAGGAGGG
CircID chr17:42521719|42522089
ORF Type ORF6
Protein Length 26
Nucleotide Length 78
Protein Sequence MVLPAACLAPPLVPPPHHTGPRSQEG
Nucleotide Sequence TTGGTTCTGCCTGCAGCCTGCCTGGCTCCGCCCCTAGTGCCCCCTCCTCACCACACTGGCCCCAGGTCTCAGGAGGGG
CircID chr17:42521719|42522089
ORF Type ORF7
Protein Length 99
Nucleotide Length 300
Protein Sequence MHSHPFLSPRSCPALHSTAGMLGTEALAAPQCTGLPSLGVGFFPGLAWALPTSTPSGRGCRLMLFPDGDPEIFPTPNHDVFSVGLGSSWFCLQPAWLRP
Nucleotide Sequence CTGCACTCCCATCCTTTCCTCTCTCCCCGTTCATGCCCTGCACTACATAGCACAGCCGGGATGCTTGGAACAGAGGCCTTGGCTGCTCCGCAGTGCACAGGGCTTCCCTCTCTCGGGGTTGGCTTCTTCCCAGGCCTTGCATGGGCCCTGCCCACAAGCACACCCTCAGGCCGAGGGTGCAGACTGATGCTCTTCCCTGATGGAGACCCTGAGATCTTCCCCACCCCCAATCATGATGTCTTCAGTGTGGGACTGGGGTCCTCTTGGTTCTGCCTGCAGCCTGCCTGGCTCCGCCCCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab