CircRNA Information

General Information
circRNA Basic Information
CircID chr17:42779105|42779301
Strand -
CircType exon
Host Gene ENSG00000131475.5;
Algorism CIRI2;
Sequence CTTTCCAGGGCTTTCAAAAGGAGACAGACCCAGTGTCCCCCAAAGACTGGATCTGTGACTCCACCAGACTCAAAAGGACTCCAGTCCTGAAGGCTGGGACCTGGGGATGGGTTTCTCACACCCCATATGTCTGTCCCTTGGATAGGGTGAGGCTGAAGCACCAGGGAGAAAATATGTGCTTCTTCTCGCCCTACCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:42779105|42779301 hsa-let-7b-5p 0 0 1
chr17:42779105|42779301 hsa-let-7b-3p 0 0 1
chr17:42779105|42779301 hsa-let-7c-5p 0 0 1
chr17:42779105|42779301 hsa-let-7c-3p 0 0 1
chr17:42779105|42779301 hsa-let-7d-5p 0 0 1
chr17:42779105|42779301 hsa-let-7d-3p 0 0 1
chr17:42779105|42779301 hsa-let-7e-5p 0 0 1
chr17:42779105|42779301 hsa-let-7e-3p 0 0 1
chr17:42779105|42779301 hsa-miR-98-5p 0 0 1
chr17:42779105|42779301 hsa-miR-98-3p 0 0 1
chr17:42779105|42779301 hsa-let-7g-5p 0 0 1
chr17:42779105|42779301 hsa-let-7g-3p 0 0 1
chr17:42779105|42779301 hsa-let-7i-5p 0 0 1
chr17:42779105|42779301 hsa-let-7i-3p 0 0 1
chr17:42779105|42779301 hsa-miR-488-5p 0 0 1
chr17:42779105|42779301 hsa-miR-488-3p 0 0 1
chr17:42779105|42779301 hsa-miR-539-5p 0 0 1
chr17:42779105|42779301 hsa-miR-539-3p 0 0 1
chr17:42779105|42779301 hsa-miR-608 0 0 1
chr17:42779105|42779301 hsa-miR-625-5p 0 0 1
chr17:42779105|42779301 hsa-miR-625-3p 0 0 1
chr17:42779105|42779301 hsa-miR-627-5p 0 0 1
chr17:42779105|42779301 hsa-miR-627-3p 0 0 1
chr17:42779105|42779301 hsa-miR-924 0 0 1
chr17:42779105|42779301 hsa-miR-1253 0 0 1
chr17:42779105|42779301 hsa-miR-1275 0 0 1
chr17:42779105|42779301 hsa-miR-193a-5p 0 0 1
chr17:42779105|42779301 hsa-miR-1289 0 0 1
chr17:42779105|42779301 hsa-miR-875-3p 0 0 1
chr17:42779105|42779301 hsa-miR-342-5p 0 0 1
chr17:42779105|42779301 hsa-miR-9 0 0 1
chr17:42779105|42779301 hsa-let-7a 0 0 1
chr17:42779105|42779301 hsa-let-7f 0 0 1
chr17:42779105|42779301 hsa-miR-4309 0 1 0
chr17:42779105|42779301 hsa-miR-4458 0 1 0
chr17:42779105|42779301 hsa-miR-4515 0 1 0
chr17:42779105|42779301 hsa-miR-3977 0 1 0
chr17:42779105|42779301 hsa-miR-5090 1 0 0
chr17:42779105|42779301 hsa-miR-12122 0 1 0
chr17:42779105|42779301 hsa-miR-211-3p 1 0 0
chr17:42779105|42779301 hsa-miR-6747-5p 0 1 0
chr17:42779105|42779301 hsa-miR-4726-3p 0 1 0
chr17:42779105|42779301 hsa-miR-671-5p 0 1 0
chr17:42779105|42779301 hsa-miR-6880-5p 0 1 0
chr17:42779105|42779301 hsa-miR-7845-5p 0 1 0
chr17:42779105|42779301 hsa-miR-6742-5p 1 0 0
chr17:42779105|42779301 hsa-miR-6757-3p 0 1 0
chr17:42779105|42779301 hsa-miR-149-3p 1 0 0
chr17:42779105|42779301 hsa-miR-6870-3p 0 1 0
chr17:42779105|42779301 hsa-miR-3614-3p 0 1 0
chr17:42779105|42779301 hsa-miR-6743-5p 1 0 0
chr17:42779105|42779301 hsa-miR-6752-5p 1 0 0
chr17:42779105|42779301 hsa-miR-6819-5p 0 1 0
chr17:42779105|42779301 hsa-miR-4649-5p 0 1 0
chr17:42779105|42779301 hsa-miR-3198 0 1 0
chr17:42779105|42779301 hsa-miR-4665-5p 0 1 0
chr17:42779105|42779301 hsa-miR-6753-3p 1 0 0
chr17:42779105|42779301 hsa-miR-7107-3p 0 1 0
chr17:42779105|42779301 hsa-miR-4704-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:42779105|42779301
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MKAGTWGWVSHTPYVCPLDRVRLKHQGENMCFFSPYL
Nucleotide Sequence CTGAAGGCTGGGACCTGGGGATGGGTTTCTCACACCCCATATGTCTGTCCCTTGGATAGGGTGAGGCTGAAGCACCAGGGAGAAAATATGTGCTTCTTCTCGCCCTACCTC

CircID chr17:42779105|42779301
ORF Type ORF2
Protein Length 54
Nucleotide Length 162
Protein Sequence MVLQPHPIQGTDIWGVRNPSPGPSLQDWSPFESGGVTDPVFGGHWVCLLLKALE
Nucleotide Sequence CTGGTGCTTCAGCCTCACCCTATCCAAGGGACAGACATATGGGGTGTGAGAAACCCATCCCCAGGTCCCAGCCTTCAGGACTGGAGTCCTTTTGAGTCTGGTGGAGTCACAGATCCAGTCTTTGGGGGACACTGGGTCTGTCTCCTTTTGAAAGCCCTGGAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites