CircNet

General Information

circRNA Basic Information

CircID	chr17:43057052\|43074521
Strand	-
CircType	exon
Host Gene	ENSG00000012048.20;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTCATCCCCTTCTAAATGCCCATCATTAGATGATAGGTGGTACATGCACAGTTGCTCTGGGAGTCTTCAGAATAGAAACTACCCATCTCAAGAGGAGCTCATTAAGGTTGTTGATGTGGAGGAGCAACAGCTGGAAGAGTCTGGGCCACACGATTTGACGGAAACATCTTACTTGCCAAGGCAAGATCTAGGGGTGACCCAGTCTATTAAAGAAAGAAAAATGCTGAATGAGCATGATTTTGAAGTCAGAGGAGATGTGGTCAATGGAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGACAGAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:43057052\|43074521	hsa-miR-31-5p	0	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:43057052\|43074521
ORF Type	ORF1
Protein Length	91
Nucleotide Length	273
Protein Sequence	MHSCSGSLQNRNYPSQEELIKVVDVEEQQLEESGPHDLTETSYLPRQDLGVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRARESQDRK
Nucleotide Sequence	ATGCACAGTTGCTCTGGGAGTCTTCAGAATAGAAACTACCCATCTCAAGAGGAGCTCATTAAGGTTGTTGATGTGGAGGAGCAACAGCTGGAAGAGTCTGGGCCACACGATTTGACGGAAACATCTTACTTGCCAAGGCAAGATCTAGGGGTGACCCAGTCTATTAAAGAAAGAAAAATGCTGAATGAGCATGATTTTGAAGTCAGAGGAGATGTGGTCAATGGAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGACAGAAAG

CircID	chr17:43057052\|43074521
ORF Type	ORF2
Protein Length	43
Nucleotide Length	129
Protein Sequence	MIGGTCTVALGVFRIETTHLKRSSLRLLMWRSNSWKSLGHTI*
Nucleotide Sequence	ATGATAGGTGGTACATGCACAGTTGCTCTGGGAGTCTTCAGAATAGAAACTACCCATCTCAAGAGGAGCTCATTAAGGTTGTTGATGTGGAGGAGCAACAGCTGGAAGAGTCTGGGCCACACGATTTGA

CircID	chr17:43057052\|43074521
ORF Type	ORF3
Protein Length	53
Nucleotide Length	159
Protein Sequence	LPWQVRCFRQIVWPRLFQLLLLHINNLNELLLRWVVSILKTPRATVHVPPII*
Nucleotide Sequence	TTGCCTTGGCAAGTAAGATGTTTCCGTCAAATCGTGTGGCCCAGACTCTTCCAGCTGTTGCTCCTCCACATCAACAACCTTAATGAGCTCCTCTTGAGATGGGTAGTTTCTATTCTGAAGACTCCCAGAGCAACTGTGCATGTACCACCTATCATCTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr17:43057052\|43074521	NOP56	0	1	0
chr17:43057052\|43074521	ELAVL1	3	1	2
chr17:43057052\|43074521	ZNF184	3	0	0
chr17:43057052\|43074521	PRPF8	0	2	0
chr17:43057052\|43074521	FMR1	1	0	3
chr17:43057052\|43074521	AGO2	0	1	0
chr17:43057052\|43074521	NOP58	1	2	2
chr17:43057052\|43074521	U2AF1	1	0	1
chr17:43057052\|43074521	U2AF2	16	5	5
chr17:43057052\|43074521	SRSF9	0	0	1
chr17:43057052\|43074521	DDX54	0	0	3
chr17:43057052\|43074521	RBM10	2	3	0
chr17:43057052\|43074521	PTBP1	8	0	0
chr17:43057052\|43074521	TRA2A	0	0	1
chr17:43057052\|43074521	DHX9	1	4	1
chr17:43057052\|43074521	ACIN1	0	0	1
chr17:43057052\|43074521	SMNDC1	0	0	1
chr17:43057052\|43074521	HNRNPA1	1	0	0
chr17:43057052\|43074521	LIN28B	0	0	2
chr17:43057052\|43074521	FXR1	0	0	1
chr17:43057052\|43074521	FXR2	0	0	1
chr17:43057052\|43074521	IGF2BP1	0	0	1
chr17:43057052\|43074521	IGF2BP2	2	2	4
chr17:43057052\|43074521	BUD13	0	0	1
chr17:43057052\|43074521	RBFOX2	0	1	0
chr17:43057052\|43074521	VIM	0	1	0
chr17:43057052\|43074521	RBM22	0	2	0
chr17:43057052\|43074521	AIFM1	1	1	0
chr17:43057052\|43074521	EIF4A3	3	1	3
chr17:43057052\|43074521	FBL	1	1	3

CircRNA Information