CircNet

General Information

circRNA Basic Information

CircID	chr17:43071124\|43071231
Strand	+
CircType	exon
Host Gene	ENSG00000012048.18;
Algorism	CIRI2;
Sequence	CCCTTACCTGGAATCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTGAAGACAGAGCCCCAGAGTCAGCTCGTGTTGGCAACATACCATCTTCAAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:43071124\|43071231	hsa-miR-383-5p	0	0	1
chr17:43071124\|43071231	hsa-miR-383-3p	0	0	1
chr17:43071124\|43071231	hsa-miR-326	0	1	1
chr17:43071124\|43071231	hsa-miR-345-5p	0	0	1
chr17:43071124\|43071231	hsa-miR-345-3p	0	0	1
chr17:43071124\|43071231	hsa-miR-567	0	0	1
chr17:43071124\|43071231	hsa-miR-637	0	0	1
chr17:43071124\|43071231	hsa-miR-760	1	0	1
chr17:43071124\|43071231	hsa-miR-1253	0	0	1
chr17:43071124\|43071231	hsa-miR-485-5p	0	0	1
chr17:43071124\|43071231	hsa-miR-525-5p	0	0	1
chr17:43071124\|43071231	hsa-miR-520a-5p	0	0	1
chr17:43071124\|43071231	hsa-miR-330-5p	0	1	1
chr17:43071124\|43071231	hsa-miR-602	0	1	0
chr17:43071124\|43071231	hsa-miR-3188	1	0	0
chr17:43071124\|43071231	hsa-miR-3929	0	1	0
chr17:43071124\|43071231	hsa-miR-4647	0	1	0
chr17:43071124\|43071231	hsa-miR-8089	1	0	0
chr17:43071124\|43071231	hsa-miR-12128	1	0	0
chr17:43071124\|43071231	hsa-miR-6894-5p	1	0	0
chr17:43071124\|43071231	hsa-miR-1178-5p	0	1	0
chr17:43071124\|43071231	hsa-miR-6784-5p	1	0	0
chr17:43071124\|43071231	hsa-miR-6823-5p	1	0	0
chr17:43071124\|43071231	hsa-miR-6501-5p	1	1	0
chr17:43071124\|43071231	hsa-miR-5197-3p	0	1	0
chr17:43071124\|43071231	hsa-miR-6813-5p	1	1	0
chr17:43071124\|43071231	hsa-miR-4667-5p	1	0	0
chr17:43071124\|43071231	hsa-miR-505-3p	0	1	0

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:43071124\|43071231
ORF Type	ORF1
Protein Length	33
Nucleotide Length	99
Protein Sequence	MESGISLFSDDPESDPSEDRAPESARVGNIPSS
Nucleotide Sequence	CTGGAATCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTGAAGACAGAGCCCCAGAGTCAGCTCGTGTTGGCAACATACCATCTTCA

CircID	chr17:43071124\|43071231
ORF Type	ORF2
Protein Length	31
Nucleotide Length	93
Protein Sequence	MESASSLMTLNLILLKTEPQSQLVLATYHLQ
Nucleotide Sequence	CTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTGAAGACAGAGCCCCAGAGTCAGCTCGTGTTGGCAACATACCATCTTCAA

CircID	chr17:43071124\|43071231
ORF Type	ORF3
Protein Length	30
Nucleotide Length	93
Protein Sequence	MLPTRADSGALSSEGSDSGSSEKRLIPDSR
Nucleotide Sequence	ATGTTGCCAACACGAGCTGACTCTGGGGCTCTGTCTTCAGAAGGATCAGATTCAGGGTCATCAGAGAAGAGGCTGATTCCAGATTCCAGGTAA

CircID	chr17:43071124\|43071231
ORF Type	ORF4
Protein Length	28
Nucleotide Length	87
Protein Sequence	LKMVCCQHELTLGLCLQKDQIQGHQRRG
Nucleotide Sequence	TTGAAGATGGTATGTTGCCAACACGAGCTGACTCTGGGGCTCTGTCTTCAGAAGGATCAGATTCAGGGTCATCAGAGAAGAGGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information