CircRNA Information

General Information
circRNA Basic Information
CircID chr17:43322184|43322336
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence GCCCAGCAAATTTTTCCTATTTTTAGTAGAGACGGCGGTCTCATCCTGTTAGCCAGGATGGTCTCCATCTCCTGACCTCGTCATCCGCCCCCCTCAGCCTCCCAAAGTTCTCGGATTACAGGCTTGAGTCACCGTGCCCTGCCTTCTGTGAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:43322184|43322336 hsa-miR-146a-5p 0 0 1
chr17:43322184|43322336 hsa-miR-146a-3p 0 0 1
chr17:43322184|43322336 hsa-miR-564 0 1 1
chr17:43322184|43322336 hsa-miR-940 0 1 1
chr17:43322184|43322336 hsa-miR-1255a 0 0 1
chr17:43322184|43322336 hsa-miR-769-5p 0 0 1
chr17:43322184|43322336 hsa-miR-485-5p 0 1 1
chr17:43322184|43322336 hsa-miR-423-5p 1 0 1
chr17:43322184|43322336 hsa-miR-1207-5p 1 0 1
chr17:43322184|43322336 hsa-miR-146b-5p 0 0 1
chr17:43322184|43322336 hsa-miR-548c-3p 0 0 1
chr17:43322184|43322336 hsa-miR-1255b 0 0 1
chr17:43322184|43322336 hsa-miR-608 1 0 0
chr17:43322184|43322336 hsa-miR-663a 1 0 0
chr17:43322184|43322336 hsa-miR-762 1 0 0
chr17:43322184|43322336 hsa-miR-298 1 0 0
chr17:43322184|43322336 hsa-miR-3137 1 0 0
chr17:43322184|43322336 hsa-miR-3188 1 0 0
chr17:43322184|43322336 hsa-miR-3196 1 0 0
chr17:43322184|43322336 hsa-miR-3929 0 1 0
chr17:43322184|43322336 hsa-miR-4430 1 0 0
chr17:43322184|43322336 hsa-miR-4463 1 0 0
chr17:43322184|43322336 hsa-miR-3689c 1 0 0
chr17:43322184|43322336 hsa-miR-4488 1 0 0
chr17:43322184|43322336 hsa-miR-4505 1 0 0
chr17:43322184|43322336 hsa-miR-2392 1 0 0
chr17:43322184|43322336 hsa-miR-4651 1 0 0
chr17:43322184|43322336 hsa-miR-4656 1 0 0
chr17:43322184|43322336 hsa-miR-4794 0 1 0
chr17:43322184|43322336 hsa-miR-5194 1 0 0
chr17:43322184|43322336 hsa-miR-5572 1 0 0
chr17:43322184|43322336 hsa-miR-5787 1 0 0
chr17:43322184|43322336 hsa-miR-6085 1 0 0
chr17:43322184|43322336 hsa-miR-6086 1 0 0
chr17:43322184|43322336 hsa-miR-6125 1 0 0
chr17:43322184|43322336 hsa-miR-6132 0 1 0
chr17:43322184|43322336 hsa-miR-6133 1 0 0
chr17:43322184|43322336 hsa-miR-6745 1 1 0
chr17:43322184|43322336 hsa-miR-8073 1 0 0
chr17:43322184|43322336 hsa-miR-8075 1 0 0
chr17:43322184|43322336 hsa-miR-8077 1 0 0
chr17:43322184|43322336 hsa-miR-12119 1 0 0
chr17:43322184|43322336 hsa-miR-12122 1 0 0
chr17:43322184|43322336 hsa-miR-6734-5p 1 1 0
chr17:43322184|43322336 hsa-miR-6840-3p 1 0 0
chr17:43322184|43322336 hsa-miR-6747-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6765-5p 1 0 0
chr17:43322184|43322336 hsa-miR-7106-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6894-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6799-5p 1 0 0
chr17:43322184|43322336 hsa-miR-3622a-5p 1 0 0
chr17:43322184|43322336 hsa-miR-4768-3p 0 1 0
chr17:43322184|43322336 hsa-miR-3192-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6880-5p 1 0 0
chr17:43322184|43322336 hsa-miR-7847-3p 1 0 0
chr17:43322184|43322336 hsa-miR-4695-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6744-5p 1 0 0
chr17:43322184|43322336 hsa-miR-7160-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6727-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6768-5p 1 0 0
chr17:43322184|43322336 hsa-miR-3180-3p 1 0 0
chr17:43322184|43322336 hsa-miR-6732-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6805-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6782-5p 1 0 0
chr17:43322184|43322336 hsa-miR-7109-5p 1 0 0
chr17:43322184|43322336 hsa-miR-1226-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6740-5p 1 0 0
chr17:43322184|43322336 hsa-miR-4793-5p 0 1 0
chr17:43322184|43322336 hsa-miR-3691-5p 1 0 0
chr17:43322184|43322336 hsa-miR-1908-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6771-5p 1 0 0
chr17:43322184|43322336 hsa-miR-4743-5p 1 0 0
chr17:43322184|43322336 hsa-miR-4787-5p 1 0 0
chr17:43322184|43322336 hsa-miR-149-3p 1 0 0
chr17:43322184|43322336 hsa-miR-6507-5p 0 1 0
chr17:43322184|43322336 hsa-miR-7112-5p 1 0 0
chr17:43322184|43322336 hsa-miR-664b-5p 1 0 0
chr17:43322184|43322336 hsa-miR-1225-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6826-5p 1 0 0
chr17:43322184|43322336 hsa-miR-3619-3p 0 1 0
chr17:43322184|43322336 hsa-miR-6502-3p 0 1 0
chr17:43322184|43322336 hsa-miR-1233-5p 1 0 0
chr17:43322184|43322336 hsa-miR-1273h-5p 1 1 0
chr17:43322184|43322336 hsa-miR-3689b-3p 1 0 0
chr17:43322184|43322336 hsa-miR-4763-3p 1 1 0
chr17:43322184|43322336 hsa-miR-6769b-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6778-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6787-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6816-5p 1 1 0
chr17:43322184|43322336 hsa-miR-6893-5p 1 1 0
chr17:43322184|43322336 hsa-miR-6775-5p 1 0 0
chr17:43322184|43322336 hsa-miR-1343-5p 1 0 0
chr17:43322184|43322336 hsa-miR-3180 1 0 0
chr17:43322184|43322336 hsa-miR-6726-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6737-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6752-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6756-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6803-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6813-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6819-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6851-5p 1 0 0
chr17:43322184|43322336 hsa-miR-7110-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6751-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6779-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6780a-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6808-5p 1 1 0
chr17:43322184|43322336 hsa-miR-6879-5p 1 0 0
chr17:43322184|43322336 hsa-miR-7111-5p 1 0 0
chr17:43322184|43322336 hsa-miR-4728-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6836-5p 1 1 0
chr17:43322184|43322336 hsa-miR-10396a-5p 1 0 0
chr17:43322184|43322336 hsa-miR-10396b-5p 1 0 0
chr17:43322184|43322336 hsa-miR-1237-5p 1 1 0
chr17:43322184|43322336 hsa-miR-1909-3p 1 0 0
chr17:43322184|43322336 hsa-miR-328-5p 1 1 0
chr17:43322184|43322336 hsa-miR-3689a-3p 1 0 0
chr17:43322184|43322336 hsa-miR-4745-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6738-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6795-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6846-5p 1 1 0
chr17:43322184|43322336 hsa-miR-6848-5p 1 1 0
chr17:43322184|43322336 hsa-miR-6858-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6883-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6887-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6831-5p 1 0 0
chr17:43322184|43322336 hsa-miR-939-5p 1 0 0
chr17:43322184|43322336 hsa-miR-4758-5p 1 0 0
chr17:43322184|43322336 hsa-miR-4716-3p 1 0 0
chr17:43322184|43322336 hsa-miR-6785-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6884-5p 1 1 0
chr17:43322184|43322336 hsa-miR-3619-5p 1 0 0
chr17:43322184|43322336 hsa-miR-363-5p 1 0 0
chr17:43322184|43322336 hsa-miR-6827-3p 0 1 0
chr17:43322184|43322336 hsa-miR-664a-5p 0 1 0
chr17:43322184|43322336 hsa-miR-433-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:43322184|43322336
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MTSSSAPLSLPKFSDYRLESPCPAFCE
Nucleotide Sequence CTGACCTCGTCATCCGCCCCCCTCAGCCTCCCAAAGTTCTCGGATTACAGGCTTGAGTCACCGTGCCCTGCCTTCTGTGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab