CircRNA Information

General Information
circRNA Basic Information
CircID chr17:43768991|43769261
Strand -
CircType exon
Host Gene ENSG00000108861.7;
Algorism CIRI2;
Sequence CATTCATCCTAAGGAAATCATTCAAATGCAGCCTTGCTGTGGGAATCTCCATCCACTAATAACTGACGGACACCCCCACCCCAGCTTCGGACCTCAAGACGTGAGAGGGCTGCCTATGCACAGGGTGTGGAAGGCTGTGGGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTCAAGAGAGGATTCGGGAGTTGGGGAAGGGAGGTCATGAGGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:43768991|43769261 hsa-miR-10a-5p 0 0 1
chr17:43768991|43769261 hsa-miR-10a-3p 0 0 1
chr17:43768991|43769261 hsa-miR-10b-5p 0 0 1
chr17:43768991|43769261 hsa-miR-10b-3p 0 0 1
chr17:43768991|43769261 hsa-miR-223-5p 0 0 1
chr17:43768991|43769261 hsa-miR-223-3p 0 0 1
chr17:43768991|43769261 hsa-miR-492 0 0 1
chr17:43768991|43769261 hsa-miR-526b-5p 0 0 1
chr17:43768991|43769261 hsa-miR-526b-3p 0 0 1
chr17:43768991|43769261 hsa-miR-608 1 0 1
chr17:43768991|43769261 hsa-miR-620 0 0 1
chr17:43768991|43769261 hsa-miR-651-5p 0 0 1
chr17:43768991|43769261 hsa-miR-651-3p 0 0 1
chr17:43768991|43769261 hsa-miR-874-5p 0 0 1
chr17:43768991|43769261 hsa-miR-874-3p 0 0 1
chr17:43768991|43769261 hsa-miR-935 0 0 1
chr17:43768991|43769261 hsa-miR-940 0 0 1
chr17:43768991|43769261 hsa-miR-1265 0 0 1
chr17:43768991|43769261 hsa-miR-1270 0 0 1
chr17:43768991|43769261 hsa-miR-1225-3p 1 0 1
chr17:43768991|43769261 hsa-miR-146b-3p 0 0 1
chr17:43768991|43769261 hsa-miR-574-5p 0 0 1
chr17:43768991|43769261 hsa-miR-628-3p 0 0 1
chr17:43768991|43769261 hsa-miR-188-3p 0 0 1
chr17:43768991|43769261 hsa-miR-342-5p 0 0 1
chr17:43768991|43769261 hsa-miR-105 0 0 1
chr17:43768991|43769261 hsa-miR-1260 0 0 1
chr17:43768991|43769261 hsa-miR-1233 0 0 1
chr17:43768991|43769261 hsa-miR-153 0 0 1
chr17:43768991|43769261 hsa-miR-527 1 0 0
chr17:43768991|43769261 hsa-miR-650 1 0 0
chr17:43768991|43769261 hsa-miR-933 1 0 0
chr17:43768991|43769261 hsa-miR-1293 1 0 0
chr17:43768991|43769261 hsa-miR-1539 1 0 0
chr17:43768991|43769261 hsa-miR-3937 1 0 0
chr17:43768991|43769261 hsa-miR-4651 1 0 0
chr17:43768991|43769261 hsa-miR-4669 1 0 0
chr17:43768991|43769261 hsa-miR-4741 1 0 0
chr17:43768991|43769261 hsa-miR-5698 1 0 0
chr17:43768991|43769261 hsa-miR-5704 1 0 0
chr17:43768991|43769261 hsa-miR-5787 1 0 0
chr17:43768991|43769261 hsa-miR-15a-3p 1 0 0
chr17:43768991|43769261 hsa-miR-6836-3p 1 0 0
chr17:43768991|43769261 hsa-miR-671-5p 1 0 0
chr17:43768991|43769261 hsa-miR-6892-3p 1 0 0
chr17:43768991|43769261 hsa-miR-6089 1 0 0
chr17:43768991|43769261 hsa-miR-3189-5p 1 0 0
chr17:43768991|43769261 hsa-miR-7110-3p 1 0 0
chr17:43768991|43769261 hsa-miR-6845-3p 1 0 0
chr17:43768991|43769261 hsa-miR-6782-5p 1 0 0
chr17:43768991|43769261 hsa-miR-7109-5p 1 0 0
chr17:43768991|43769261 hsa-miR-7113-3p 1 0 0
chr17:43768991|43769261 hsa-miR-3667-3p 1 0 0
chr17:43768991|43769261 hsa-miR-7111-3p 1 0 0
chr17:43768991|43769261 hsa-miR-4787-5p 1 0 0
chr17:43768991|43769261 hsa-miR-6743-3p 1 0 0
chr17:43768991|43769261 hsa-miR-6811-3p 1 0 0
chr17:43768991|43769261 hsa-miR-6813-3p 1 0 0
chr17:43768991|43769261 hsa-miR-6752-3p 1 0 0
chr17:43768991|43769261 hsa-miR-1914-5p 1 0 0
chr17:43768991|43769261 hsa-miR-6886-3p 1 0 0
chr17:43768991|43769261 hsa-miR-5088-3p 1 0 0
chr17:43768991|43769261 hsa-miR-3151-3p 1 0 0
chr17:43768991|43769261 hsa-miR-6777-3p 1 0 0
chr17:43768991|43769261 hsa-miR-6760-3p 1 0 0
chr17:43768991|43769261 hsa-miR-1229-3p 1 0 0
chr17:43768991|43769261 hsa-miR-4717-5p 1 0 0
chr17:43768991|43769261 hsa-miR-3173-5p 1 0 0
chr17:43768991|43769261 hsa-miR-4433b-5p 1 0 0
chr17:43768991|43769261 hsa-miR-6734-3p 1 0 0
chr17:43768991|43769261 hsa-miR-1249-3p 1 0 0
chr17:43768991|43769261 hsa-miR-3162-3p 1 0 0
chr17:43768991|43769261 hsa-miR-6812-5p 1 0 0
chr17:43768991|43769261 hsa-miR-6816-5p 1 0 0
chr17:43768991|43769261 hsa-miR-6726-5p 1 0 0
chr17:43768991|43769261 hsa-miR-6752-5p 1 0 0
chr17:43768991|43769261 hsa-miR-6754-5p 1 0 0
chr17:43768991|43769261 hsa-miR-6756-5p 1 0 0
chr17:43768991|43769261 hsa-miR-6769a-5p 1 0 0
chr17:43768991|43769261 hsa-miR-6803-5p 1 0 0
chr17:43768991|43769261 hsa-miR-6842-5p 1 0 0
chr17:43768991|43769261 hsa-miR-7110-5p 1 0 0
chr17:43768991|43769261 hsa-miR-6751-5p 1 0 0
chr17:43768991|43769261 hsa-miR-320a-5p 1 0 0
chr17:43768991|43769261 hsa-miR-4685-3p 1 0 0
chr17:43768991|43769261 hsa-miR-6799-3p 1 0 0
chr17:43768991|43769261 hsa-miR-6805-3p 1 0 0
chr17:43768991|43769261 hsa-miR-6511b-3p 1 0 0
chr17:43768991|43769261 hsa-miR-6744-3p 1 0 0
chr17:43768991|43769261 hsa-miR-6797-3p 1 0 0
chr17:43768991|43769261 hsa-miR-6811-5p 1 0 0
chr17:43768991|43769261 hsa-miR-518a-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:43768991|43769261
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MHLHSSFTRAQGVEVHTQERIRELGKGGHEG
Nucleotide Sequence CTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTCAAGAGAGGATTCGGGAGTTGGGGAAGGGAGGTCATGAGGGA

CircID chr17:43768991|43769261
ORF Type ORF2
Protein Length 82
Nucleotide Length 246
Protein Sequence MQPCCGNLHPLITDGHPHPSFGPQDVRGLPMHRVWKAVGTVQGTDVVGRVACICIVPLLGLKVLRSTLKRGFGSWGREVMRD
Nucleotide Sequence ATGCAGCCTTGCTGTGGGAATCTCCATCCACTAATAACTGACGGACACCCCCACCCCAGCTTCGGACCTCAAGACGTGAGAGGGCTGCCTATGCACAGGGTGTGGAAGGCTGTGGGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTCAAGAGAGGATTCGGGAGTTGGGGAAGGGAGGTCATGAGGGAC

CircID chr17:43768991|43769261
ORF Type ORF3
Protein Length 31
Nucleotide Length 96
Protein Sequence MHCPHSLPHPVHRQPSHVLRSEAGVGVSVSY
Nucleotide Sequence CTGCACTGTCCCCACAGCCTTCCACACCCTGTGCATAGGCAGCCCTCTCACGTCTTGAGGTCCGAAGCTGGGGTGGGGGTGTCCGTCAGTTATTAG

CircID chr17:43768991|43769261
ORF Type ORF4
Protein Length 56
Nucleotide Length 171
Protein Sequence MTSLPQLPNPLLSVDLNTLSPSKGTMQMQATLPTTSVPCTVPTAFHTLCIGSPLTS
Nucleotide Sequence ATGACCTCCCTTCCCCAACTCCCGAATCCTCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCCCACAGCCTTCCACACCCTGTGCATAGGCAGCCCTCTCACGTCTTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites