CircRNA Information

General Information
circRNA Basic Information
CircID chr17:44351058|44351411
Strand -
CircType exon
Host Gene ENSG00000030582.15;
Algorism CIRI2;
Sequence CTGCACTGCTGCCCCCAAGACACTGTGTGTGACCTGATCCAGAGTAAGTGCCTCTCCAAGGAGAACGCTACCACGGACCTCCTCACTAAGCTGCCTGCGCACACAGGTACCAGAGGCAGGGTGCAGATACAGGGGTGGGGCCCCCTTTCCTCCCTTTTAGGCCTGGCCTTAGGATCACTGCAAGGTGGTGTAAGCGGTACCCTCCATCTTCAACACCTGGTTCCAGCTGTGGAGCCGGCAAAGGGTTGATACCCCTGAGGGTCCCCAGTGCCACTTCTGACCTGTCCTCTCTGCTTCCCTCACAGTGGGGGATGTGAAATGTGACATGGAGGTGAGCTGCCCAGATGGCTATAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:44351058|44351411 hsa-miR-23a-5p 0 0 1
chr17:44351058|44351411 hsa-miR-23a-3p 0 0 1
chr17:44351058|44351411 hsa-miR-148a-5p 0 0 1
chr17:44351058|44351411 hsa-miR-148a-3p 0 0 1
chr17:44351058|44351411 hsa-miR-23b-5p 0 0 1
chr17:44351058|44351411 hsa-miR-23b-3p 0 0 1
chr17:44351058|44351411 hsa-miR-152-5p 0 0 1
chr17:44351058|44351411 hsa-miR-152-3p 0 0 1
chr17:44351058|44351411 hsa-miR-185-5p 0 0 1
chr17:44351058|44351411 hsa-miR-185-3p 0 0 1
chr17:44351058|44351411 hsa-miR-377-5p 0 0 1
chr17:44351058|44351411 hsa-miR-377-3p 0 0 1
chr17:44351058|44351411 hsa-miR-148b-5p 0 0 1
chr17:44351058|44351411 hsa-miR-148b-3p 0 0 1
chr17:44351058|44351411 hsa-miR-431-5p 0 0 1
chr17:44351058|44351411 hsa-miR-431-3p 0 0 1
chr17:44351058|44351411 hsa-miR-432-5p 0 0 1
chr17:44351058|44351411 hsa-miR-432-3p 0 0 1
chr17:44351058|44351411 hsa-miR-612 0 1 1
chr17:44351058|44351411 hsa-miR-620 0 0 1
chr17:44351058|44351411 hsa-miR-635 0 0 1
chr17:44351058|44351411 hsa-miR-653-5p 0 0 1
chr17:44351058|44351411 hsa-miR-653-3p 0 0 1
chr17:44351058|44351411 hsa-miR-921 0 0 1
chr17:44351058|44351411 hsa-miR-933 1 1 1
chr17:44351058|44351411 hsa-miR-1294 0 0 1
chr17:44351058|44351411 hsa-miR-1263 0 0 1
chr17:44351058|44351411 hsa-miR-1266-5p 0 0 1
chr17:44351058|44351411 hsa-miR-1266-3p 0 0 1
chr17:44351058|44351411 hsa-miR-1270 0 0 1
chr17:44351058|44351411 hsa-miR-1275 0 0 1
chr17:44351058|44351411 hsa-miR-1321 0 0 1
chr17:44351058|44351411 hsa-miR-296-5p 0 1 1
chr17:44351058|44351411 hsa-miR-486-3p 1 1 1
chr17:44351058|44351411 hsa-miR-361-3p 0 0 1
chr17:44351058|44351411 hsa-miR-1207-3p 0 0 1
chr17:44351058|44351411 hsa-miR-220b 0 0 1
chr17:44351058|44351411 hsa-miR-128 0 0 1
chr17:44351058|44351411 hsa-miR-1285 0 0 1
chr17:44351058|44351411 hsa-miR-1245 0 0 1
chr17:44351058|44351411 hsa-miR-637 1 1 0
chr17:44351058|44351411 hsa-miR-650 1 0 0
chr17:44351058|44351411 hsa-miR-760 1 0 0
chr17:44351058|44351411 hsa-miR-940 1 0 0
chr17:44351058|44351411 hsa-miR-1182 1 0 0
chr17:44351058|44351411 hsa-miR-1231 1 0 0
chr17:44351058|44351411 hsa-miR-1245a 0 1 0
chr17:44351058|44351411 hsa-miR-3131 0 1 0
chr17:44351058|44351411 hsa-miR-3197 1 0 0
chr17:44351058|44351411 hsa-miR-4298 1 0 0
chr17:44351058|44351411 hsa-miR-3916 1 0 0
chr17:44351058|44351411 hsa-miR-3937 1 0 0
chr17:44351058|44351411 hsa-miR-4426 0 1 0
chr17:44351058|44351411 hsa-miR-4436a 1 1 0
chr17:44351058|44351411 hsa-miR-4518 0 1 0
chr17:44351058|44351411 hsa-miR-4538 1 0 0
chr17:44351058|44351411 hsa-miR-4647 0 1 0
chr17:44351058|44351411 hsa-miR-4660 1 0 0
chr17:44351058|44351411 hsa-miR-4689 0 1 0
chr17:44351058|44351411 hsa-miR-4692 0 1 0
chr17:44351058|44351411 hsa-miR-4706 1 0 0
chr17:44351058|44351411 hsa-miR-4739 1 1 0
chr17:44351058|44351411 hsa-miR-5681a 0 1 0
chr17:44351058|44351411 hsa-miR-6069 1 0 0
chr17:44351058|44351411 hsa-miR-8089 0 1 0
chr17:44351058|44351411 hsa-miR-12115 1 0 0
chr17:44351058|44351411 hsa-miR-12131 0 1 0
chr17:44351058|44351411 hsa-miR-187-3p 1 0 0
chr17:44351058|44351411 hsa-miR-323a-5p 1 1 0
chr17:44351058|44351411 hsa-miR-4433a-3p 1 1 0
chr17:44351058|44351411 hsa-miR-7106-5p 1 1 0
chr17:44351058|44351411 hsa-miR-6894-5p 1 0 0
chr17:44351058|44351411 hsa-miR-1972 1 0 0
chr17:44351058|44351411 hsa-miR-766-5p 0 1 0
chr17:44351058|44351411 hsa-miR-3934-5p 0 1 0
chr17:44351058|44351411 hsa-miR-6515-5p 0 1 0
chr17:44351058|44351411 hsa-miR-6089 1 0 0
chr17:44351058|44351411 hsa-miR-6873-5p 0 1 0
chr17:44351058|44351411 hsa-miR-4755-3p 1 1 0
chr17:44351058|44351411 hsa-miR-6806-5p 1 0 0
chr17:44351058|44351411 hsa-miR-3151-5p 1 0 0
chr17:44351058|44351411 hsa-miR-6805-5p 0 1 0
chr17:44351058|44351411 hsa-miR-6810-5p 1 1 0
chr17:44351058|44351411 hsa-miR-5008-5p 1 0 0
chr17:44351058|44351411 hsa-miR-1226-5p 1 0 0
chr17:44351058|44351411 hsa-miR-4783-3p 1 0 0
chr17:44351058|44351411 hsa-miR-885-3p 1 0 0
chr17:44351058|44351411 hsa-miR-6749-5p 1 0 0
chr17:44351058|44351411 hsa-miR-149-3p 1 1 0
chr17:44351058|44351411 hsa-miR-6828-5p 0 1 0
chr17:44351058|44351411 hsa-miR-6895-5p 1 0 0
chr17:44351058|44351411 hsa-miR-3922-5p 1 0 0
chr17:44351058|44351411 hsa-miR-4758-3p 0 1 0
chr17:44351058|44351411 hsa-miR-6832-5p 0 1 0
chr17:44351058|44351411 hsa-miR-6801-5p 0 1 0
chr17:44351058|44351411 hsa-miR-4746-3p 1 0 0
chr17:44351058|44351411 hsa-miR-216a-3p 0 1 0
chr17:44351058|44351411 hsa-miR-1296-5p 1 0 0
chr17:44351058|44351411 hsa-miR-4649-3p 1 0 0
chr17:44351058|44351411 hsa-miR-5004-5p 0 1 0
chr17:44351058|44351411 hsa-miR-3620-3p 0 1 0
chr17:44351058|44351411 hsa-miR-1298-3p 0 1 0
chr17:44351058|44351411 hsa-miR-3200-3p 0 1 0
chr17:44351058|44351411 hsa-miR-514a-5p 0 1 0
chr17:44351058|44351411 hsa-miR-550b-3p 0 1 0
chr17:44351058|44351411 hsa-miR-6778-5p 1 0 0
chr17:44351058|44351411 hsa-miR-6893-5p 1 0 0
chr17:44351058|44351411 hsa-miR-6743-5p 1 0 0
chr17:44351058|44351411 hsa-miR-6754-5p 0 1 0
chr17:44351058|44351411 hsa-miR-6851-5p 0 1 0
chr17:44351058|44351411 hsa-miR-1249-5p 0 1 0
chr17:44351058|44351411 hsa-miR-6722-3p 1 0 0
chr17:44351058|44351411 hsa-miR-6797-5p 1 1 0
chr17:44351058|44351411 hsa-miR-6808-5p 1 0 0
chr17:44351058|44351411 hsa-miR-6879-5p 1 0 0
chr17:44351058|44351411 hsa-miR-10526-3p 0 1 0
chr17:44351058|44351411 hsa-miR-328-5p 1 0 0
chr17:44351058|44351411 hsa-miR-4632-5p 1 0 0
chr17:44351058|44351411 hsa-miR-4685-5p 0 1 0
chr17:44351058|44351411 hsa-miR-4745-5p 1 0 0
chr17:44351058|44351411 hsa-miR-4749-5p 1 0 0
chr17:44351058|44351411 hsa-miR-6858-5p 0 1 0
chr17:44351058|44351411 hsa-miR-3187-5p 0 1 0
chr17:44351058|44351411 hsa-miR-4436b-3p 1 1 0
chr17:44351058|44351411 hsa-miR-6885-5p 1 0 0
chr17:44351058|44351411 hsa-miR-939-5p 1 0 0
chr17:44351058|44351411 hsa-miR-6511a-5p 1 0 0
chr17:44351058|44351411 hsa-miR-6511b-5p 1 0 0
chr17:44351058|44351411 hsa-miR-6758-5p 0 1 0
chr17:44351058|44351411 hsa-miR-6856-5p 1 1 0
chr17:44351058|44351411 hsa-miR-1271-3p 1 0 0
chr17:44351058|44351411 hsa-miR-1914-3p 1 0 0
chr17:44351058|44351411 hsa-miR-6736-5p 1 0 0
chr17:44351058|44351411 hsa-miR-3679-5p 1 0 0
chr17:44351058|44351411 hsa-miR-4667-5p 0 1 0
chr17:44351058|44351411 hsa-miR-4756-5p 1 1 0
chr17:44351058|44351411 hsa-miR-330-5p 1 0 0
chr17:44351058|44351411 hsa-miR-1234-3p 1 0 0
chr17:44351058|44351411 hsa-miR-3121-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:44351058|44351411
ORF Type ORF1
Protein Length 82
Nucleotide Length 249
Protein Sequence LHCCPQDTVCDLIQSKCLSKENATTDLLTKLPAHTGTRGRVQIQGWGPLSSLLGLALGSLQGGVSGTLHLQHLVPAVEPAKG
Nucleotide Sequence CTGCACTGCTGCCCCCAAGACACTGTGTGTGACCTGATCCAGAGTAAGTGCCTCTCCAAGGAGAACGCTACCACGGACCTCCTCACTAAGCTGCCTGCGCACACAGGTACCAGAGGCAGGGTGCAGATACAGGGGTGGGGCCCCCTTTCCTCCCTTTTAGGCCTGGCCTTAGGATCACTGCAAGGTGGTGTAAGCGGTACCCTCCATCTTCAACACCTGGTTCCAGCTGTGGAGCCGGCAAAGGGTTGA
CircID chr17:44351058|44351411
ORF Type ORF2
Protein Length 50
Nucleotide Length 153
Protein Sequence MSHFTSPTVREAERTGQKWHWGPSGVSTLCRLHSWNQVLKMEGTAYTTLQ
Nucleotide Sequence ATGTCACATTTCACATCCCCCACTGTGAGGGAAGCAGAGAGGACAGGTCAGAAGTGGCACTGGGGACCCTCAGGGGTATCAACCCTTTGCCGGCTCCACAGCTGGAACCAGGTGTTGAAGATGGAGGGTACCGCTTACACCACCTTGCAGTGA
CircID chr17:44351058|44351411
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MYLHPASGTCVRRQLSEEVRGSVLLGEALTLDQVTHSVLGAAVQ
Nucleotide Sequence CTGTATCTGCACCCTGCCTCTGGTACCTGTGTGCGCAGGCAGCTTAGTGAGGAGGTCCGTGGTAGCGTTCTCCTTGGAGAGGCACTTACTCTGGATCAGGTCACACACAGTGTCTTGGGGGCAGCAGTGCAG
CircID chr17:44351058|44351411
ORF Type ORF4
Protein Length 39
Nucleotide Length 117
Protein Sequence MPLVPVCAGSLVRRSVVAFSLERHLLWIRSHTVSWGQQC
Nucleotide Sequence CTGCCTCTGGTACCTGTGTGCGCAGGCAGCTTAGTGAGGAGGTCCGTGGTAGCGTTCTCCTTGGAGAGGCACTTACTCTGGATCAGGTCACACACAGTGTCTTGGGGGCAGCAGTGC
CircID chr17:44351058|44351411
ORF Type ORF5
Protein Length 60
Nucleotide Length 183
Protein Sequence MGTLRGINPLPAPQLEPGVEDGGYRLHHLAVILRPGLKGRKGGPTPVSAPCLWYLCAQAA
Nucleotide Sequence CTGGGGACCCTCAGGGGTATCAACCCTTTGCCGGCTCCACAGCTGGAACCAGGTGTTGAAGATGGAGGGTACCGCTTACACCACCTTGCAGTGATCCTAAGGCCAGGCCTAAAAGGGAGGAAAGGGGGCCCCACCCCTGTATCTGCACCCTGCCTCTGGTACCTGTGTGCGCAGGCAGCTTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab