CircRNA Information

General Information
circRNA Basic Information
CircID chr17:45102916|45103021
Strand +
CircType exon
Host Gene ENSG00000136448.10;
Algorism CIRI2;
Sequence CTGGTGAGGAGCTGGTGCACTACTGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTGGAGGCAAGACAGAAGAGATGGAGTGAGATGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:45102916|45103021 hsa-miR-130a-5p 0 0 1
chr17:45102916|45103021 hsa-miR-130a-3p 0 0 1
chr17:45102916|45103021 hsa-miR-150-5p 0 0 1
chr17:45102916|45103021 hsa-miR-150-3p 0 0 1
chr17:45102916|45103021 hsa-miR-301a-5p 0 0 1
chr17:45102916|45103021 hsa-miR-301a-3p 0 0 1
chr17:45102916|45103021 hsa-miR-130b-5p 0 0 1
chr17:45102916|45103021 hsa-miR-130b-3p 0 0 1
chr17:45102916|45103021 hsa-miR-431-5p 0 0 1
chr17:45102916|45103021 hsa-miR-431-3p 0 0 1
chr17:45102916|45103021 hsa-miR-604 0 0 1
chr17:45102916|45103021 hsa-miR-454-5p 0 0 1
chr17:45102916|45103021 hsa-miR-454-3p 0 0 1
chr17:45102916|45103021 hsa-miR-301b-5p 0 0 1
chr17:45102916|45103021 hsa-miR-301b-3p 0 0 1
chr17:45102916|45103021 hsa-miR-1226-5p 0 0 1
chr17:45102916|45103021 hsa-miR-1226-3p 0 0 1
chr17:45102916|45103021 hsa-miR-1236-5p 0 0 1
chr17:45102916|45103021 hsa-miR-1236-3p 0 0 1
chr17:45102916|45103021 hsa-miR-145-5p 0 0 1
chr17:45102916|45103021 hsa-miR-770-5p 0 0 1
chr17:45102916|45103021 hsa-miR-767-5p 0 0 1
chr17:45102916|45103021 hsa-miR-1207-3p 0 0 1
chr17:45102916|45103021 hsa-miR-199b-3p 0 0 1
chr17:45102916|45103021 hsa-miR-199a-3p 0 0 1
chr17:45102916|45103021 hsa-miR-483-3p 1 0 1
chr17:45102916|45103021 hsa-miR-4505 0 1 0
chr17:45102916|45103021 hsa-miR-4675 1 0 0
chr17:45102916|45103021 hsa-miR-6072 0 1 0
chr17:45102916|45103021 hsa-miR-8080 0 1 0
chr17:45102916|45103021 hsa-miR-149-5p 1 0 0
chr17:45102916|45103021 hsa-miR-6829-5p 0 1 0
chr17:45102916|45103021 hsa-miR-6847-5p 0 1 0
chr17:45102916|45103021 hsa-miR-4743-3p 0 1 0
chr17:45102916|45103021 hsa-miR-7111-3p 1 0 0
chr17:45102916|45103021 hsa-miR-6736-3p 0 1 0
chr17:45102916|45103021 hsa-miR-2115-5p 1 1 0
chr17:45102916|45103021 hsa-miR-4695-3p 1 0 0
chr17:45102916|45103021 hsa-miR-3605-3p 1 0 0
chr17:45102916|45103021 hsa-miR-7151-5p 1 1 0
chr17:45102916|45103021 hsa-miR-1285-5p 1 0 0
chr17:45102916|45103021 hsa-miR-7158-5p 1 0 0
chr17:45102916|45103021 hsa-miR-3152-5p 0 1 0
chr17:45102916|45103021 hsa-miR-6784-3p 1 0 0
chr17:45102916|45103021 hsa-miR-6827-3p 1 1 0
chr17:45102916|45103021 hsa-miR-92b-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:45102916|45103021
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence LVRSWCTTGMSFVSIGRSPAVLGVWRQDRRDGVR
Nucleotide Sequence CTGGTGAGGAGCTGGTGCACTACTGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTGGAGGCAAGACAGAAGAGATGGAGTGAGATGA

CircID chr17:45102916|45103021
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MECPLFPLVAAQLSWESGGKTEEME
Nucleotide Sequence CTGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTGGAGGCAAGACAGAAGAGATGGAGTGA

CircID chr17:45102916|45103021
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MVHYWNVLCFHWSQPSCLGSLEARQKRWSEM
Nucleotide Sequence CTGGTGCACTACTGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTGGAGGCAAGACAGAAGAGATGGAGTGAGATG

CircID chr17:45102916|45103021
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MPPDSQDSWAATNGNKGHSSSAPAPHQ
Nucleotide Sequence TTGCCTCCAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAG

CircID chr17:45102916|45103021
ORF Type ORF5
Protein Length 28
Nucleotide Length 84
Protein Sequence MSCLQTPKTAGLRPMETKDIPVVHQLLT
Nucleotide Sequence CTGTCTTGCCTCCAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCAGTAGTGCACCAGCTCCTCACC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites