CircRNA Information

General Information
circRNA Basic Information
CircID chr17:45106967|45107075
Strand +
CircType exon
Host Gene ENSG00000136448.10;
Algorism CIRI2;
Sequence CCGCACACCACACGTCATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:45106967|45107075 hsa-let-7b-5p 0 0 1
chr17:45106967|45107075 hsa-let-7b-3p 0 0 1
chr17:45106967|45107075 hsa-let-7c-5p 0 0 1
chr17:45106967|45107075 hsa-let-7c-3p 0 0 1
chr17:45106967|45107075 hsa-let-7d-5p 0 0 1
chr17:45106967|45107075 hsa-let-7d-3p 0 0 1
chr17:45106967|45107075 hsa-let-7e-5p 0 0 1
chr17:45106967|45107075 hsa-let-7e-3p 0 0 1
chr17:45106967|45107075 hsa-miR-98-5p 0 0 1
chr17:45106967|45107075 hsa-miR-98-3p 0 0 1
chr17:45106967|45107075 hsa-let-7g-5p 0 0 1
chr17:45106967|45107075 hsa-let-7g-3p 0 0 1
chr17:45106967|45107075 hsa-let-7i-5p 0 0 1
chr17:45106967|45107075 hsa-let-7i-3p 0 0 1
chr17:45106967|45107075 hsa-miR-380-5p 0 0 1
chr17:45106967|45107075 hsa-miR-380-3p 0 0 1
chr17:45106967|45107075 hsa-miR-541-5p 0 0 1
chr17:45106967|45107075 hsa-miR-541-3p 0 0 1
chr17:45106967|45107075 hsa-miR-147b-5p 0 0 1
chr17:45106967|45107075 hsa-miR-147b-3p 0 0 1
chr17:45106967|45107075 hsa-miR-129-5p 0 0 1
chr17:45106967|45107075 hsa-miR-654-5p 1 0 1
chr17:45106967|45107075 hsa-miR-518d-5p 1 1 1
chr17:45106967|45107075 hsa-miR-519b-5p 1 1 1
chr17:45106967|45107075 hsa-miR-519c-5p 1 1 1
chr17:45106967|45107075 hsa-miR-520c-5p 1 1 1
chr17:45106967|45107075 hsa-miR-590-3p 0 0 1
chr17:45106967|45107075 hsa-let-7a 0 0 1
chr17:45106967|45107075 hsa-let-7f 0 0 1
chr17:45106967|45107075 hsa-miR-526a 0 0 1
chr17:45106967|45107075 hsa-miR-612 1 0 0
chr17:45106967|45107075 hsa-miR-663a 1 0 0
chr17:45106967|45107075 hsa-miR-765 1 0 0
chr17:45106967|45107075 hsa-miR-3147 1 0 0
chr17:45106967|45107075 hsa-miR-3185 1 0 0
chr17:45106967|45107075 hsa-miR-4429 1 0 0
chr17:45106967|45107075 hsa-miR-4458 1 0 0
chr17:45106967|45107075 hsa-miR-4476 1 0 0
chr17:45106967|45107075 hsa-miR-3689c 1 0 0
chr17:45106967|45107075 hsa-miR-4510 1 0 0
chr17:45106967|45107075 hsa-miR-4533 1 1 0
chr17:45106967|45107075 hsa-miR-4651 1 0 0
chr17:45106967|45107075 hsa-miR-4654 1 0 0
chr17:45106967|45107075 hsa-miR-4675 1 1 0
chr17:45106967|45107075 hsa-miR-4706 1 0 0
chr17:45106967|45107075 hsa-miR-4739 1 0 0
chr17:45106967|45107075 hsa-miR-5703 1 0 0
chr17:45106967|45107075 hsa-miR-6090 1 0 0
chr17:45106967|45107075 hsa-miR-6127 1 0 0
chr17:45106967|45107075 hsa-miR-6133 1 0 0
chr17:45106967|45107075 hsa-miR-6134 1 0 0
chr17:45106967|45107075 hsa-miR-6165 1 0 0
chr17:45106967|45107075 hsa-miR-6860 1 0 0
chr17:45106967|45107075 hsa-miR-7974 0 1 0
chr17:45106967|45107075 hsa-miR-8085 1 0 0
chr17:45106967|45107075 hsa-miR-12115 1 0 0
chr17:45106967|45107075 hsa-miR-12118 1 1 0
chr17:45106967|45107075 hsa-miR-92a-2-5p 1 0 0
chr17:45106967|45107075 hsa-miR-7106-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6825-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6799-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6728-5p 1 0 0
chr17:45106967|45107075 hsa-miR-5187-5p 1 0 0
chr17:45106967|45107075 hsa-miR-3192-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6880-5p 1 0 0
chr17:45106967|45107075 hsa-miR-4695-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6746-5p 1 0 0
chr17:45106967|45107075 hsa-miR-4722-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6748-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6732-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6760-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6782-5p 1 0 0
chr17:45106967|45107075 hsa-miR-30b-3p 1 0 0
chr17:45106967|45107075 hsa-miR-6835-5p 1 0 0
chr17:45106967|45107075 hsa-miR-7109-5p 1 0 0
chr17:45106967|45107075 hsa-miR-204-3p 1 0 0
chr17:45106967|45107075 hsa-miR-1228-5p 1 0 0
chr17:45106967|45107075 hsa-miR-149-3p 1 0 0
chr17:45106967|45107075 hsa-miR-3162-5p 1 1 0
chr17:45106967|45107075 hsa-miR-6877-5p 1 0 0
chr17:45106967|45107075 hsa-miR-7112-5p 1 0 0
chr17:45106967|45107075 hsa-let-7f-5p 1 1 0
chr17:45106967|45107075 hsa-miR-4727-3p 1 0 0
chr17:45106967|45107075 hsa-miR-518c-5p 1 1 0
chr17:45106967|45107075 hsa-miR-4772-5p 1 0 0
chr17:45106967|45107075 hsa-miR-517-5p 0 1 0
chr17:45106967|45107075 hsa-miR-1207-5p 1 0 0
chr17:45106967|45107075 hsa-miR-1233-5p 1 0 0
chr17:45106967|45107075 hsa-miR-1273h-5p 1 0 0
chr17:45106967|45107075 hsa-miR-3689b-3p 1 0 0
chr17:45106967|45107075 hsa-miR-4763-3p 1 0 0
chr17:45106967|45107075 hsa-miR-6769b-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6778-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6865-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6754-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6769a-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6819-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6851-5p 1 0 0
chr17:45106967|45107075 hsa-miR-11181-3p 1 0 0
chr17:45106967|45107075 hsa-miR-1249-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6763-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6779-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6780a-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6788-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6797-5p 1 0 0
chr17:45106967|45107075 hsa-miR-7111-5p 1 0 0
chr17:45106967|45107075 hsa-miR-3620-5p 1 0 0
chr17:45106967|45107075 hsa-miR-4728-5p 1 0 0
chr17:45106967|45107075 hsa-miR-5189-5p 1 0 0
chr17:45106967|45107075 hsa-miR-5196-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6780b-5p 1 0 0
chr17:45106967|45107075 hsa-miR-10396b-5p 1 0 0
chr17:45106967|45107075 hsa-miR-3689a-3p 1 0 0
chr17:45106967|45107075 hsa-miR-4632-5p 1 0 0
chr17:45106967|45107075 hsa-miR-4725-3p 1 0 0
chr17:45106967|45107075 hsa-miR-6735-5p 1 0 0
chr17:45106967|45107075 hsa-miR-675-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6858-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6883-5p 1 0 0
chr17:45106967|45107075 hsa-miR-3187-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6831-5p 1 0 0
chr17:45106967|45107075 hsa-miR-4769-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6511a-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6758-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6856-5p 1 1 0
chr17:45106967|45107075 hsa-miR-4646-5p 1 0 0
chr17:45106967|45107075 hsa-miR-4747-5p 1 1 0
chr17:45106967|45107075 hsa-miR-6876-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6891-5p 1 1 0
chr17:45106967|45107075 hsa-miR-6766-5p 1 0 0
chr17:45106967|45107075 hsa-miR-6785-5p 1 0 0
chr17:45106967|45107075 hsa-miR-518e-5p 1 1 0
chr17:45106967|45107075 hsa-miR-518f-5p 1 1 0
chr17:45106967|45107075 hsa-miR-519a-5p 1 1 0
chr17:45106967|45107075 hsa-miR-522-5p 1 1 0
chr17:45106967|45107075 hsa-miR-523-5p 1 1 0
chr17:45106967|45107075 hsa-miR-526a-5p 1 1 0
chr17:45106967|45107075 hsa-miR-3059-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:45106967|45107075
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MLPPSHHLLLSRAKITSKPGSTISQPNFARS
Nucleotide Sequence ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCA
CircID chr17:45106967|45107075
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MGCEIVLPGLDVIFALERSKWWEGGSMTCGVR
Nucleotide Sequence TTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGCGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab