CircRNA Information

General Information
circRNA Basic Information
CircID chr17:46030476|46030804
Strand -
CircType exon
Host Gene ENSG00000120071.11;
Algorism CIRI2;
Sequence CACAGCTAGGACCAGACAATGTTCCACAGGCAAGGGGAGCGTGAAAGACCAAGAGTGGAACTAACACCGACAGGGATCTGGATGTGAAGGAAACATGGCAAAGTGAATCAGAGGGAAAAAAAAAAAAAATCACACAGGGAGATGGCTGCTCACTTCCCACAACCCCCAGTTTGCAGGGGAGTGGGAATAGAGGTTAAGTAGTCCTAACCCTACCTTCAAAGATCAGGATAGGTGGTAAAAATATTCCAAGTGGAAGGACGGGTTGTGGGTGTGTACATGGCATGGGAGAGCAGACAGGGAAGGGTACCAAGGGGCATGAGGAGGGGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:46030476|46030804 hsa-miR-23a-5p 0 0 1
chr17:46030476|46030804 hsa-miR-23a-3p 0 0 1
chr17:46030476|46030804 hsa-miR-205-5p 0 0 1
chr17:46030476|46030804 hsa-miR-205-3p 0 0 1
chr17:46030476|46030804 hsa-miR-23b-5p 0 0 1
chr17:46030476|46030804 hsa-miR-23b-3p 0 0 1
chr17:46030476|46030804 hsa-miR-150-5p 0 0 1
chr17:46030476|46030804 hsa-miR-150-3p 0 0 1
chr17:46030476|46030804 hsa-miR-346 1 0 1
chr17:46030476|46030804 hsa-miR-493-5p 0 0 1
chr17:46030476|46030804 hsa-miR-493-3p 0 0 1
chr17:46030476|46030804 hsa-miR-603 0 0 1
chr17:46030476|46030804 hsa-miR-632 1 0 1
chr17:46030476|46030804 hsa-miR-637 0 0 1
chr17:46030476|46030804 hsa-miR-890 0 0 1
chr17:46030476|46030804 hsa-miR-1231 0 0 1
chr17:46030476|46030804 hsa-miR-1247-5p 0 0 1
chr17:46030476|46030804 hsa-miR-1247-3p 0 0 1
chr17:46030476|46030804 hsa-miR-1258 0 0 1
chr17:46030476|46030804 hsa-miR-1263 0 0 1
chr17:46030476|46030804 hsa-miR-532-3p 1 0 1
chr17:46030476|46030804 hsa-miR-296-3p 0 0 1
chr17:46030476|46030804 hsa-miR-339-5p 1 0 1
chr17:46030476|46030804 hsa-miR-331-3p 0 0 1
chr17:46030476|46030804 hsa-miR-767-3p 1 0 1
chr17:46030476|46030804 hsa-miR-188-3p 0 0 1
chr17:46030476|46030804 hsa-miR-362-3p 0 0 1
chr17:46030476|46030804 hsa-miR-1260 0 0 1
chr17:46030476|46030804 hsa-miR-1274a 0 0 1
chr17:46030476|46030804 hsa-miR-642 0 0 1
chr17:46030476|46030804 hsa-miR-1274b 0 0 1
chr17:46030476|46030804 hsa-miR-329 0 0 1
chr17:46030476|46030804 hsa-miR-623 1 0 0
chr17:46030476|46030804 hsa-miR-1260a 1 0 0
chr17:46030476|46030804 hsa-miR-1281 1 0 0
chr17:46030476|46030804 hsa-miR-1470 1 0 0
chr17:46030476|46030804 hsa-miR-1976 1 0 0
chr17:46030476|46030804 hsa-miR-4313 1 0 0
chr17:46030476|46030804 hsa-miR-4290 1 0 0
chr17:46030476|46030804 hsa-miR-4641 1 0 0
chr17:46030476|46030804 hsa-miR-4780 1 0 0
chr17:46030476|46030804 hsa-miR-5193 1 0 0
chr17:46030476|46030804 hsa-miR-5100 1 0 0
chr17:46030476|46030804 hsa-miR-6749-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6892-3p 1 0 0
chr17:46030476|46030804 hsa-miR-210-5p 1 0 0
chr17:46030476|46030804 hsa-miR-1225-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6873-3p 1 0 0
chr17:46030476|46030804 hsa-miR-1915-5p 1 0 0
chr17:46030476|46030804 hsa-miR-6845-3p 1 0 0
chr17:46030476|46030804 hsa-miR-877-3p 1 0 0
chr17:46030476|46030804 hsa-miR-4655-3p 1 0 0
chr17:46030476|46030804 hsa-miR-942-5p 1 0 0
chr17:46030476|46030804 hsa-miR-6728-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6740-3p 1 0 0
chr17:46030476|46030804 hsa-miR-4713-5p 1 0 0
chr17:46030476|46030804 hsa-miR-4436b-5p 1 0 0
chr17:46030476|46030804 hsa-miR-7109-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6772-3p 1 0 0
chr17:46030476|46030804 hsa-miR-3667-3p 1 0 0
chr17:46030476|46030804 hsa-miR-7111-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6830-3p 1 0 0
chr17:46030476|46030804 hsa-miR-4667-3p 1 0 0
chr17:46030476|46030804 hsa-miR-4446-5p 1 0 0
chr17:46030476|46030804 hsa-miR-181b-5p 1 0 0
chr17:46030476|46030804 hsa-miR-4646-3p 1 0 0
chr17:46030476|46030804 hsa-miR-211-5p 1 0 0
chr17:46030476|46030804 hsa-miR-1237-3p 1 0 0
chr17:46030476|46030804 hsa-miR-1236-3p 1 0 0
chr17:46030476|46030804 hsa-miR-3120-5p 1 0 0
chr17:46030476|46030804 hsa-miR-7106-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6828-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6887-3p 1 0 0
chr17:46030476|46030804 hsa-miR-2276-5p 1 0 0
chr17:46030476|46030804 hsa-miR-6741-3p 1 0 0
chr17:46030476|46030804 hsa-miR-7848-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6826-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6886-3p 1 0 0
chr17:46030476|46030804 hsa-miR-5088-3p 1 0 0
chr17:46030476|46030804 hsa-miR-4749-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6795-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6880-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6883-3p 1 0 0
chr17:46030476|46030804 hsa-miR-204-5p 1 0 0
chr17:46030476|46030804 hsa-miR-6748-3p 1 0 0
chr17:46030476|46030804 hsa-miR-7152-5p 1 0 0
chr17:46030476|46030804 hsa-miR-6851-3p 1 0 0
chr17:46030476|46030804 hsa-miR-3173-5p 1 0 0
chr17:46030476|46030804 hsa-miR-6734-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6812-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6729-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6780b-3p 1 0 0
chr17:46030476|46030804 hsa-miR-642a-5p 1 0 0
chr17:46030476|46030804 hsa-miR-181c-5p 1 0 0
chr17:46030476|46030804 hsa-miR-181a-5p 1 0 0
chr17:46030476|46030804 hsa-miR-2116-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6800-3p 1 0 0
chr17:46030476|46030804 hsa-miR-4716-5p 1 0 0
chr17:46030476|46030804 hsa-miR-3127-3p 1 0 0
chr17:46030476|46030804 hsa-miR-320a-5p 1 0 0
chr17:46030476|46030804 hsa-miR-4685-3p 1 0 0
chr17:46030476|46030804 hsa-miR-5008-3p 1 0 0
chr17:46030476|46030804 hsa-miR-2682-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6753-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6756-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6792-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6862-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6805-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6810-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6829-3p 1 0 0
chr17:46030476|46030804 hsa-miR-3059-5p 1 0 0
chr17:46030476|46030804 hsa-miR-483-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6819-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6891-3p 1 0 0
chr17:46030476|46030804 hsa-miR-4768-5p 1 0 0
chr17:46030476|46030804 hsa-miR-6848-3p 1 0 0
chr17:46030476|46030804 hsa-miR-6827-3p 1 0 0
chr17:46030476|46030804 hsa-miR-4769-3p 1 0 0
chr17:46030476|46030804 hsa-miR-4724-3p 1 0 0
chr17:46030476|46030804 hsa-miR-181d-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:46030476|46030804
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MDVKETWQSESEGKKKKITQGDGCSLPTTPSLQGSGNRG
Nucleotide Sequence CTGGATGTGAAGGAAACATGGCAAAGTGAATCAGAGGGAAAAAAAAAAAAAATCACACAGGGAGATGGCTGCTCACTTCCCACAACCCCCAGTTTGCAGGGGAGTGGGAATAGAGGTTAA

CircID chr17:46030476|46030804
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MPLGTLPCLLSHAMYTPTTRPSTWNIFTTYPDL
Nucleotide Sequence ATGCCCCTTGGTACCCTTCCCTGTCTGCTCTCCCATGCCATGTACACACCCACAACCCGTCCTTCCACTTGGAATATTTTTACCACCTATCCTGATCTTTGA

CircID chr17:46030476|46030804
ORF Type ORF3
Protein Length 31
Nucleotide Length 96
Protein Sequence MPCFLHIQIPVGVSSTLGLSRSPCLWNIVWS
Nucleotide Sequence TTGCCATGTTTCCTTCACATCCAGATCCCTGTCGGTGTTAGTTCCACTCTTGGTCTTTCACGCTCCCCTTGCCTGTGGAACATTGTCTGGTCCTAG

CircID chr17:46030476|46030804
ORF Type ORF4
Protein Length 38
Nucleotide Length 117
Protein Sequence MVPFPVCSPMPCTHPQPVLPLGIFLPPILIFEGRVRTT
Nucleotide Sequence TTGGTACCCTTCCCTGTCTGCTCTCCCATGCCATGTACACACCCACAACCCGTCCTTCCACTTGGAATATTTTTACCACCTATCCTGATCTTTGAAGGTAGGGTTAGGACTACTTAA

CircID chr17:46030476|46030804
ORF Type ORF5
Protein Length 56
Nucleotide Length 168
Protein Sequence MGVVGSEQPSPCVIFFFFPSDSLCHVSFTSRSLSVLVPLLVFHAPLACGTLSGPSC
Nucleotide Sequence CTGGGGGTTGTGGGAAGTGAGCAGCCATCTCCCTGTGTGATTTTTTTTTTTTTTCCCTCTGATTCACTTTGCCATGTTTCCTTCACATCCAGATCCCTGTCGGTGTTAGTTCCACTCTTGGTCTTTCACGCTCCCCTTGCCTGTGGAACATTGTCTGGTCCTAGCTGT

CircID chr17:46030476|46030804
ORF Type ORF6
Protein Length 29
Nucleotide Length 90
Protein Sequence MKVGLGLLNLYSHSPANWGLWEVSSHLPV
Nucleotide Sequence TTGAAGGTAGGGTTAGGACTACTTAACCTCTATTCCCACTCCCCTGCAAACTGGGGGTTGTGGGAAGTGAGCAGCCATCTCCCTGTGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites