CircRNA Information

General Information
circRNA Basic Information
CircID chr17:48050791|48051023
Strand +
CircType exon
Host Gene ENSG00000082641.14;
Algorism CIRI2;
Sequence CCTCCTCAGTGTCAAACCCCGTACCCCACCCTGGCAGAACACAAGGGATGAGCTCCCTGACGGCCCCAGAGGAAAGCACACCCTGTGGAGCCAAGGCCAAGGACACACTCCAGACCACATTCACTTTCCCTTCTCGACACCTCACCTCTGAAAGTACAACTGTTCCTAACCCAGTCCAGGTCCTCAAGGGCCCACGTGACTTACTTTCTCCACAGTCCACATACAGTCACTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:48050791|48051023 hsa-miR-224-5p 0 0 1
chr17:48050791|48051023 hsa-miR-224-3p 0 0 1
chr17:48050791|48051023 hsa-miR-122-5p 0 0 1
chr17:48050791|48051023 hsa-miR-122-3p 0 0 1
chr17:48050791|48051023 hsa-miR-134-5p 0 0 1
chr17:48050791|48051023 hsa-miR-134-3p 0 0 1
chr17:48050791|48051023 hsa-miR-326 0 1 1
chr17:48050791|48051023 hsa-miR-422a 0 1 1
chr17:48050791|48051023 hsa-miR-492 0 0 1
chr17:48050791|48051023 hsa-miR-559 0 0 1
chr17:48050791|48051023 hsa-miR-567 0 0 1
chr17:48050791|48051023 hsa-miR-581 0 1 1
chr17:48050791|48051023 hsa-miR-619-5p 0 0 1
chr17:48050791|48051023 hsa-miR-619-3p 0 0 1
chr17:48050791|48051023 hsa-miR-623 0 1 1
chr17:48050791|48051023 hsa-miR-631 0 0 1
chr17:48050791|48051023 hsa-miR-636 0 0 1
chr17:48050791|48051023 hsa-miR-637 0 0 1
chr17:48050791|48051023 hsa-miR-920 0 0 1
chr17:48050791|48051023 hsa-miR-943 0 0 1
chr17:48050791|48051023 hsa-miR-297 0 0 1
chr17:48050791|48051023 hsa-miR-1238-5p 0 0 1
chr17:48050791|48051023 hsa-miR-1238-3p 0 0 1
chr17:48050791|48051023 hsa-miR-548j-5p 0 0 1
chr17:48050791|48051023 hsa-miR-548j-3p 0 0 1
chr17:48050791|48051023 hsa-miR-1294 0 0 1
chr17:48050791|48051023 hsa-miR-1257 0 1 1
chr17:48050791|48051023 hsa-miR-1258 0 0 1
chr17:48050791|48051023 hsa-miR-1288-5p 0 0 1
chr17:48050791|48051023 hsa-miR-1288-3p 0 0 1
chr17:48050791|48051023 hsa-miR-296-5p 0 0 1
chr17:48050791|48051023 hsa-miR-1224-5p 1 0 1
chr17:48050791|48051023 hsa-miR-299-3p 0 0 1
chr17:48050791|48051023 hsa-miR-574-5p 1 1 1
chr17:48050791|48051023 hsa-miR-188-5p 0 0 1
chr17:48050791|48051023 hsa-miR-330-5p 0 1 1
chr17:48050791|48051023 hsa-miR-548b-5p 0 0 1
chr17:48050791|48051023 hsa-miR-548d-5p 0 0 1
chr17:48050791|48051023 hsa-miR-548c-5p 0 0 1
chr17:48050791|48051023 hsa-miR-548a-5p 0 0 1
chr17:48050791|48051023 hsa-miR-548i 0 0 1
chr17:48050791|48051023 hsa-miR-220c 0 0 1
chr17:48050791|48051023 hsa-miR-378 0 0 1
chr17:48050791|48051023 hsa-miR-1269 0 0 1
chr17:48050791|48051023 hsa-miR-218 0 0 1
chr17:48050791|48051023 hsa-miR-514 0 0 1
chr17:48050791|48051023 hsa-miR-516b 0 0 1
chr17:48050791|48051023 hsa-miR-548h 0 0 1
chr17:48050791|48051023 hsa-miR-658 1 0 0
chr17:48050791|48051023 hsa-miR-762 1 0 0
chr17:48050791|48051023 hsa-miR-760 1 0 0
chr17:48050791|48051023 hsa-miR-1183 1 0 0
chr17:48050791|48051023 hsa-miR-1293 1 0 0
chr17:48050791|48051023 hsa-miR-1265 1 0 0
chr17:48050791|48051023 hsa-miR-2861 1 0 0
chr17:48050791|48051023 hsa-miR-378b 0 1 0
chr17:48050791|48051023 hsa-miR-3138 1 0 0
chr17:48050791|48051023 hsa-miR-3141 1 0 0
chr17:48050791|48051023 hsa-miR-3147 1 0 0
chr17:48050791|48051023 hsa-miR-3153 0 1 0
chr17:48050791|48051023 hsa-miR-3154 0 1 0
chr17:48050791|48051023 hsa-miR-378c 0 1 0
chr17:48050791|48051023 hsa-miR-4322 1 0 0
chr17:48050791|48051023 hsa-miR-4257 1 1 0
chr17:48050791|48051023 hsa-miR-4270 1 0 0
chr17:48050791|48051023 hsa-miR-3661 0 1 0
chr17:48050791|48051023 hsa-miR-3909 0 1 0
chr17:48050791|48051023 hsa-miR-3911 1 1 0
chr17:48050791|48051023 hsa-miR-378e 0 1 0
chr17:48050791|48051023 hsa-miR-378h 0 1 0
chr17:48050791|48051023 hsa-miR-4463 1 0 0
chr17:48050791|48051023 hsa-miR-4466 1 0 0
chr17:48050791|48051023 hsa-miR-4488 1 0 0
chr17:48050791|48051023 hsa-miR-4491 1 1 0
chr17:48050791|48051023 hsa-miR-4498 1 0 0
chr17:48050791|48051023 hsa-miR-4505 1 0 0
chr17:48050791|48051023 hsa-miR-378i 0 1 0
chr17:48050791|48051023 hsa-miR-4535 1 0 0
chr17:48050791|48051023 hsa-miR-1587 1 0 0
chr17:48050791|48051023 hsa-miR-4651 1 0 0
chr17:48050791|48051023 hsa-miR-4656 1 0 0
chr17:48050791|48051023 hsa-miR-4657 1 1 0
chr17:48050791|48051023 hsa-miR-4658 1 1 0
chr17:48050791|48051023 hsa-miR-4669 1 0 0
chr17:48050791|48051023 hsa-miR-4710 1 0 0
chr17:48050791|48051023 hsa-miR-4741 1 0 0
chr17:48050791|48051023 hsa-miR-4751 0 1 0
chr17:48050791|48051023 hsa-miR-4754 1 0 0
chr17:48050791|48051023 hsa-miR-4780 0 1 0
chr17:48050791|48051023 hsa-miR-5190 1 0 0
chr17:48050791|48051023 hsa-miR-5192 1 0 0
chr17:48050791|48051023 hsa-miR-5194 1 0 0
chr17:48050791|48051023 hsa-miR-5572 1 0 0
chr17:48050791|48051023 hsa-miR-5787 1 0 0
chr17:48050791|48051023 hsa-miR-6074 1 0 0
chr17:48050791|48051023 hsa-miR-6085 1 0 0
chr17:48050791|48051023 hsa-miR-6086 1 0 0
chr17:48050791|48051023 hsa-miR-6860 1 0 0
chr17:48050791|48051023 hsa-miR-7515 0 1 0
chr17:48050791|48051023 hsa-miR-8052 1 0 0
chr17:48050791|48051023 hsa-miR-8065 1 1 0
chr17:48050791|48051023 hsa-miR-8089 1 0 0
chr17:48050791|48051023 hsa-miR-12128 1 0 0
chr17:48050791|48051023 hsa-miR-92a-1-5p 1 1 0
chr17:48050791|48051023 hsa-miR-92a-2-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6734-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6747-5p 1 0 0
chr17:48050791|48051023 hsa-miR-4433a-3p 1 0 0
chr17:48050791|48051023 hsa-miR-212-5p 0 1 0
chr17:48050791|48051023 hsa-miR-6861-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6825-5p 1 0 0
chr17:48050791|48051023 hsa-miR-125a-3p 1 0 0
chr17:48050791|48051023 hsa-miR-219a-1-3p 1 0 0
chr17:48050791|48051023 hsa-miR-29b-2-5p 0 1 0
chr17:48050791|48051023 hsa-miR-6799-5p 1 0 0
chr17:48050791|48051023 hsa-miR-8071 1 0 0
chr17:48050791|48051023 hsa-miR-1236-5p 1 0 0
chr17:48050791|48051023 hsa-miR-5187-5p 1 0 0
chr17:48050791|48051023 hsa-miR-7114-5p 1 1 0
chr17:48050791|48051023 hsa-miR-6890-5p 1 0 0
chr17:48050791|48051023 hsa-miR-4474-3p 1 0 0
chr17:48050791|48051023 hsa-miR-7845-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6742-5p 1 0 0
chr17:48050791|48051023 hsa-miR-491-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6716-5p 1 0 0
chr17:48050791|48051023 hsa-miR-3151-5p 1 0 0
chr17:48050791|48051023 hsa-miR-1292-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6796-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6881-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6782-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6821-5p 1 0 0
chr17:48050791|48051023 hsa-miR-5006-5p 1 1 0
chr17:48050791|48051023 hsa-miR-6786-5p 1 0 0
chr17:48050791|48051023 hsa-miR-1226-5p 1 0 0
chr17:48050791|48051023 hsa-miR-1229-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6823-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6749-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6847-5p 1 0 0
chr17:48050791|48051023 hsa-miR-7854-3p 1 0 0
chr17:48050791|48051023 hsa-miR-425-3p 1 0 0
chr17:48050791|48051023 hsa-miR-6824-5p 1 0 0
chr17:48050791|48051023 hsa-miR-3162-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6802-5p 1 0 0
chr17:48050791|48051023 hsa-miR-4800-5p 1 0 0
chr17:48050791|48051023 hsa-miR-1225-5p 1 0 0
chr17:48050791|48051023 hsa-miR-3670 0 1 0
chr17:48050791|48051023 hsa-miR-6769b-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6812-5p 1 1 0
chr17:48050791|48051023 hsa-miR-6816-5p 1 0 0
chr17:48050791|48051023 hsa-miR-1343-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6737-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6752-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6754-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6756-5p 1 1 0
chr17:48050791|48051023 hsa-miR-6769a-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6819-5p 1 0 0
chr17:48050791|48051023 hsa-miR-7107-5p 1 0 0
chr17:48050791|48051023 hsa-miR-7110-5p 1 0 0
chr17:48050791|48051023 hsa-miR-1249-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6722-3p 1 0 0
chr17:48050791|48051023 hsa-miR-6797-5p 1 0 0
chr17:48050791|48051023 hsa-miR-3620-5p 1 0 0
chr17:48050791|48051023 hsa-miR-5196-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6780b-5p 1 0 0
chr17:48050791|48051023 hsa-miR-1237-5p 1 0 0
chr17:48050791|48051023 hsa-miR-4685-5p 1 0 0
chr17:48050791|48051023 hsa-miR-4745-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6738-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6777-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6848-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6858-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6889-5p 1 0 0
chr17:48050791|48051023 hsa-miR-939-5p 1 0 0
chr17:48050791|48051023 hsa-miR-4769-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6758-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6773-5p 0 1 0
chr17:48050791|48051023 hsa-miR-4665-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6736-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6855-5p 1 0 0
chr17:48050791|48051023 hsa-miR-3679-5p 1 0 0
chr17:48050791|48051023 hsa-miR-4747-5p 1 1 0
chr17:48050791|48051023 hsa-miR-378a-3p 0 1 0
chr17:48050791|48051023 hsa-miR-6750-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6766-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6790-5p 1 1 0
chr17:48050791|48051023 hsa-miR-6849-5p 1 1 0
chr17:48050791|48051023 hsa-miR-6724-5p 1 1 0
chr17:48050791|48051023 hsa-miR-342-5p 1 0 0
chr17:48050791|48051023 hsa-miR-6753-3p 1 0 0
chr17:48050791|48051023 hsa-miR-5009-5p 1 0 0
chr17:48050791|48051023 hsa-miR-3059-5p 0 1 0
chr17:48050791|48051023 hsa-miR-378d 0 1 0
chr17:48050791|48051023 hsa-miR-548az-5p 0 1 0
chr17:48050791|48051023 hsa-miR-549a-5p 0 1 0
chr17:48050791|48051023 hsa-miR-548t-5p 0 1 0
chr17:48050791|48051023 hsa-miR-548h-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:48050791|48051023
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MKVQLFLTQSRSSRAHVTYFLHSPHTVT
Nucleotide Sequence CTGAAAGTACAACTGTTCCTAACCCAGTCCAGGTCCTCAAGGGCCCACGTGACTTACTTTCTCCACAGTCCACATACAGTCACT
CircID chr17:48050791|48051023
ORF Type ORF2
Protein Length 62
Nucleotide Length 186
Protein Sequence MSSLTAPEESTPCGAKAKDTLQTTFTFPSRHLTSESTTVPNPVQVLKGPRDLLSPQSTYSHF
Nucleotide Sequence ATGAGCTCCCTGACGGCCCCAGAGGAAAGCACACCCTGTGGAGCCAAGGCCAAGGACACACTCCAGACCACATTCACTTTCCCTTCTCGACACCTCACCTCTGAAAGTACAACTGTTCCTAACCCAGTCCAGGTCCTCAAGGGCCCACGTGACTTACTTTCTCCACAGTCCACATACAGTCACTTC
CircID chr17:48050791|48051023
ORF Type ORF3
Protein Length 55
Nucleotide Length 168
Protein Sequence MDWVRNSCTFRGEVSRRESECGLECVLGLGSTGCAFLWGRQGAHPLCSARVGYGV
Nucleotide Sequence CTGGACTGGGTTAGGAACAGTTGTACTTTCAGAGGTGAGGTGTCGAGAAGGGAAAGTGAATGTGGTCTGGAGTGTGTCCTTGGCCTTGGCTCCACAGGGTGTGCTTTCCTCTGGGGCCGTCAGGGAGCTCATCCCTTGTGTTCTGCCAGGGTGGGGTACGGGGTTTGA
CircID chr17:48050791|48051023
ORF Type ORF4
Protein Length 75
Nucleotide Length 225
Protein Sequence MYVDCGESKSRGPLRTWTGLGTVVLSEVRCREGKVNVVWSVSLALAPQGVLSSGAVRELIPCVLPGWGTGFDTEE
Nucleotide Sequence CTGTATGTGGACTGTGGAGAAAGTAAGTCACGTGGGCCCTTGAGGACCTGGACTGGGTTAGGAACAGTTGTACTTTCAGAGGTGAGGTGTCGAGAAGGGAAAGTGAATGTGGTCTGGAGTGTGTCCTTGGCCTTGGCTCCACAGGGTGTGCTTTCCTCTGGGGCCGTCAGGGAGCTCATCCCTTGTGTTCTGCCAGGGTGGGGTACGGGGTTTGACACTGAGGAG
CircID chr17:48050791|48051023
ORF Type ORF5
Protein Length 40
Nucleotide Length 120
Protein Sequence MWSGVCPWPWLHRVCFPLGPSGSSSLVFCQGGVRGLTLRR
Nucleotide Sequence ATGTGGTCTGGAGTGTGTCCTTGGCCTTGGCTCCACAGGGTGTGCTTTCCTCTGGGGCCGTCAGGGAGCTCATCCCTTGTGTTCTGCCAGGGTGGGGTACGGGGTTTGACACTGAGGAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab