CircRNA Information

General Information
circRNA Basic Information
CircID chr17:48050895|48051023
Strand +
CircType exon
Host Gene ENSG00000082641.14;
Algorism CIRI2;
Sequence CCTCCTCAGTGTCAAACCCCGTACCCCACCCTGGCAGAACACAAGGGATGAGCTCCCTGACGGCCCCAGAGGAAAGCACACCCTGTGGAGCCAAGGCCAAGGACACACTCCAGACCACATTCACTTTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:48050895|48051023 hsa-miR-122-5p 0 0 1
chr17:48050895|48051023 hsa-miR-122-3p 0 0 1
chr17:48050895|48051023 hsa-miR-326 0 1 1
chr17:48050895|48051023 hsa-miR-581 0 1 1
chr17:48050895|48051023 hsa-miR-623 0 0 1
chr17:48050895|48051023 hsa-miR-636 0 0 1
chr17:48050895|48051023 hsa-miR-637 0 0 1
chr17:48050895|48051023 hsa-miR-920 0 0 1
chr17:48050895|48051023 hsa-miR-1238-5p 0 0 1
chr17:48050895|48051023 hsa-miR-1238-3p 0 0 1
chr17:48050895|48051023 hsa-miR-1257 0 1 1
chr17:48050895|48051023 hsa-miR-574-5p 1 1 1
chr17:48050895|48051023 hsa-miR-188-5p 0 0 1
chr17:48050895|48051023 hsa-miR-330-5p 0 1 1
chr17:48050895|48051023 hsa-miR-220c 0 0 1
chr17:48050895|48051023 hsa-miR-218 0 0 1
chr17:48050895|48051023 hsa-miR-514 0 0 1
chr17:48050895|48051023 hsa-miR-516b 0 0 1
chr17:48050895|48051023 hsa-miR-762 1 0 0
chr17:48050895|48051023 hsa-miR-1293 1 0 0
chr17:48050895|48051023 hsa-miR-1265 1 0 0
chr17:48050895|48051023 hsa-miR-3141 1 0 0
chr17:48050895|48051023 hsa-miR-4270 1 0 0
chr17:48050895|48051023 hsa-miR-3909 0 1 0
chr17:48050895|48051023 hsa-miR-4466 1 0 0
chr17:48050895|48051023 hsa-miR-4488 1 0 0
chr17:48050895|48051023 hsa-miR-4491 1 0 0
chr17:48050895|48051023 hsa-miR-4651 1 0 0
chr17:48050895|48051023 hsa-miR-4657 1 0 0
chr17:48050895|48051023 hsa-miR-4658 1 1 0
chr17:48050895|48051023 hsa-miR-4741 1 0 0
chr17:48050895|48051023 hsa-miR-5194 1 0 0
chr17:48050895|48051023 hsa-miR-5787 1 0 0
chr17:48050895|48051023 hsa-miR-6085 1 0 0
chr17:48050895|48051023 hsa-miR-92a-2-5p 1 0 0
chr17:48050895|48051023 hsa-miR-212-5p 0 1 0
chr17:48050895|48051023 hsa-miR-29b-2-5p 0 1 0
chr17:48050895|48051023 hsa-miR-6890-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6742-5p 1 0 0
chr17:48050895|48051023 hsa-miR-491-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6716-5p 1 0 0
chr17:48050895|48051023 hsa-miR-3151-5p 1 0 0
chr17:48050895|48051023 hsa-miR-1292-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6796-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6881-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6782-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6821-5p 1 0 0
chr17:48050895|48051023 hsa-miR-5006-5p 1 1 0
chr17:48050895|48051023 hsa-miR-6786-5p 1 0 0
chr17:48050895|48051023 hsa-miR-4764-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6823-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6824-5p 1 0 0
chr17:48050895|48051023 hsa-miR-3162-5p 1 0 0
chr17:48050895|48051023 hsa-miR-1225-5p 1 0 0
chr17:48050895|48051023 hsa-miR-3670 0 1 0
chr17:48050895|48051023 hsa-miR-6769b-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6812-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6816-5p 1 0 0
chr17:48050895|48051023 hsa-miR-1343-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6737-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6752-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6754-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6756-5p 1 1 0
chr17:48050895|48051023 hsa-miR-6769a-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6819-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6722-3p 1 0 0
chr17:48050895|48051023 hsa-miR-1237-5p 1 0 0
chr17:48050895|48051023 hsa-miR-4685-5p 1 0 0
chr17:48050895|48051023 hsa-miR-4745-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6738-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6777-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6889-5p 1 0 0
chr17:48050895|48051023 hsa-miR-939-5p 1 0 0
chr17:48050895|48051023 hsa-miR-4665-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6855-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6766-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6790-5p 1 1 0
chr17:48050895|48051023 hsa-miR-6849-5p 1 1 0
chr17:48050895|48051023 hsa-miR-342-5p 1 0 0
chr17:48050895|48051023 hsa-miR-6753-3p 1 0 0
chr17:48050895|48051023 hsa-miR-3059-5p 0 1 0
chr17:48050895|48051023 hsa-miR-548az-5p 0 1 0
chr17:48050895|48051023 hsa-miR-549a-5p 0 1 0
chr17:48050895|48051023 hsa-miR-548t-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:48050895|48051023
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MSSLTAPEESTPCGAKAKDTLQTTFTF
Nucleotide Sequence ATGAGCTCCCTGACGGCCCCAGAGGAAAGCACACCCTGTGGAGCCAAGGCCAAGGACACACTCCAGACCACATTCACTTTC

CircID chr17:48050895|48051023
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MWSGVCPWPWLHRVCFPLGPSGSSSLVFCQGGVRGLTLRR
Nucleotide Sequence ATGTGGTCTGGAGTGTGTCCTTGGCCTTGGCTCCACAGGGTGTGCTTTCCTCTGGGGCCGTCAGGGAGCTCATCCCTTGTGTTCTGCCAGGGTGGGGTACGGGGTTTGACACTGAGGAGG

CircID chr17:48050895|48051023
ORF Type ORF3
Protein Length 33
Nucleotide Length 102
Protein Sequence MECVLGLGSTGCAFLWGRQGAHPLCSARVGYGV
Nucleotide Sequence CTGGAGTGTGTCCTTGGCCTTGGCTCCACAGGGTGTGCTTTCCTCTGGGGCCGTCAGGGAGCTCATCCCTTGTGTTCTGCCAGGGTGGGGTACGGGGTTTGA

CircID chr17:48050895|48051023
ORF Type ORF4
Protein Length 33
Nucleotide Length 99
Protein Sequence MALAPQGVLSSGAVRELIPCVLPGWGTGFDTEE
Nucleotide Sequence TTGGCCTTGGCTCCACAGGGTGTGCTTTCCTCTGGGGCCGTCAGGGAGCTCATCCCTTGTGTTCTGCCAGGGTGGGGTACGGGGTTTGACACTGAGGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites