CircRNA Information

General Information
circRNA Basic Information
CircID chr17:48051014|48051216
Strand -
CircType exon
Host Gene ENSG00000082641.14;
Algorism CIRI2;
Sequence ACTGAGGAGGGTAACCTGCTGGCTGGAGCGGCAGAGCAGTGGCCTTGATTTGTCTTTTGGAAGATTTTAAAAACCAAAAAGCATAAACATTCTGGTCCTTCAGCAATGCTTTCTCTGAAGAAATACTTAACGGAAGGACTTCTCCAGTTCACCATTCTGCTGAGTTTGATTGGGGTACGGGTGGACGTGGATACTTACCTGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:48051014|48051216
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MLSLKKYLTEGLLQFTILLSLIGVRVDVDTYL
Nucleotide Sequence ATGCTTTCTCTGAAGAAATACTTAACGGAAGGACTTCTCCAGTTCACCATTCTGCTGAGTTTGATTGGGGTACGGGTGGACGTGGATACTTACCTG

CircID chr17:48051014|48051216
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MVNWRSPSVKYFFRESIAEGPECLCFLVFKIFQKTNQGHCSAAPASRLPSS
Nucleotide Sequence ATGGTGAACTGGAGAAGTCCTTCCGTTAAGTATTTCTTCAGAGAAAGCATTGCTGAAGGACCAGAATGTTTATGCTTTTTGGTTTTTAAAATCTTCCAAAAGACAAATCAAGGCCACTGCTCTGCCGCTCCAGCCAGCAGGTTACCCTCCTCA

CircID chr17:48051014|48051216
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MLKDQNVYAFWFLKSSKRQIKATALPLQPAGYPPQ
Nucleotide Sequence TTGCTGAAGGACCAGAATGTTTATGCTTTTTGGTTTTTAAAATCTTCCAAAAGACAAATCAAGGCCACTGCTCTGCCGCTCCAGCCAGCAGGTTACCCTCCTCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites