CircRNA Information

General Information
circRNA Basic Information
CircID chr17:48058806|48058940
Strand +
CircType exon
Host Gene ENSG00000082641.14;
Algorism CIRI2;
Sequence CCTCGGCCTCTTCCAGATCCAGGGTCTCAGAGTCAGAGCTGTAGCCAACCGCACCTTCCTCAGAAAAGGAGGAAGAGGCAGAGGAAGAAGCAGAGGAAGAAGAGGAAGAGGAGGAGGAAGAAGAGGAAGAACTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:48058806|48058940 hsa-miR-18a-5p 0 0 1
chr17:48058806|48058940 hsa-miR-18a-3p 0 0 1
chr17:48058806|48058940 hsa-miR-345-5p 0 0 1
chr17:48058806|48058940 hsa-miR-345-3p 0 0 1
chr17:48058806|48058940 hsa-miR-18b-5p 0 0 1
chr17:48058806|48058940 hsa-miR-18b-3p 0 0 1
chr17:48058806|48058940 hsa-miR-504-5p 0 0 1
chr17:48058806|48058940 hsa-miR-504-3p 0 0 1
chr17:48058806|48058940 hsa-miR-675-5p 0 0 1
chr17:48058806|48058940 hsa-miR-675-3p 0 0 1
chr17:48058806|48058940 hsa-miR-1236-5p 0 0 1
chr17:48058806|48058940 hsa-miR-1236-3p 0 0 1
chr17:48058806|48058940 hsa-miR-1299 0 0 1
chr17:48058806|48058940 hsa-miR-769-5p -7 0 1
chr17:48058806|48058940 hsa-miR-875-3p 0 0 1
chr17:48058806|48058940 hsa-miR-7 0 0 1
chr17:48058806|48058940 hsa-miR-548v -9 1 0
chr17:48058806|48058940 hsa-miR-4329 -3 1 0
chr17:48058806|48058940 hsa-miR-3921 -7 1 0
chr17:48058806|48058940 hsa-miR-5193 -22 1 0
chr17:48058806|48058940 hsa-miR-12119 -4 1 0
chr17:48058806|48058940 hsa-miR-103a-2-5p -14 1 0
chr17:48058806|48058940 hsa-miR-6881-3p -22 1 0
chr17:48058806|48058940 hsa-miR-6089 0 1 0
chr17:48058806|48058940 hsa-miR-6875-3p -20 1 0
chr17:48058806|48058940 hsa-miR-877-3p -30 1 0
chr17:48058806|48058940 hsa-miR-6728-3p -13 1 0
chr17:48058806|48058940 hsa-miR-6882-3p -17 1 0
chr17:48058806|48058940 hsa-miR-5001-3p -19 1 0
chr17:48058806|48058940 hsa-miR-6809-3p -22 1 0
chr17:48058806|48058940 hsa-miR-7111-3p -28 1 0
chr17:48058806|48058940 hsa-miR-6780a-3p -18 1 0
chr17:48058806|48058940 hsa-miR-4778-3p -16 1 0
chr17:48058806|48058940 hsa-miR-5584-3p -17 1 0
chr17:48058806|48058940 hsa-miR-4714-5p -10 1 0
chr17:48058806|48058940 hsa-miR-320a-5p -25 1 0
chr17:48058806|48058940 hsa-miR-2682-3p -19 1 0
chr17:48058806|48058940 hsa-miR-6791-5p -13 1 0
chr17:48058806|48058940 hsa-miR-3059-5p -16 1 0
chr17:48058806|48058940 hsa-miR-6529-3p -9 1 0
chr17:48058806|48058940 hsa-miR-6891-3p -28 1 0
chr17:48058806|48058940 hsa-miR-6781-3p -5 1 0
chr17:48058806|48058940 hsa-miR-103a-1-5p -14 1 0
chr17:48058806|48058940 hsa-miR-3121-5p -10 1 0
chr17:48058806|48058940 hsa-miR-301a-5p -6 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:48058806|48058940
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MLLPLPLPPFLRKVRLATALTLRPWIWKRPR
Nucleotide Sequence CTGCTTCTTCCTCTGCCTCTTCCTCCTTTTCTGAGGAAGGTGCGGTTGGCTACAGCTCTGACTCTGAGACCCTGGATCTGGAAGAGGCCGAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites