CircRNA Information

General Information
circRNA Basic Information
CircID chr17:48060404|48060609
Strand -
CircType exon
Host Gene ENSG00000082641.14;
Algorism CIRI2;
Sequence ATCACGCATGTCATTCACTGCCTTGCCACTCCATCTCCCTCCGTGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTTCCCCACCCCTCACAGACTGCCTGAGCTCTTCTGTAAGCTGGGGTAGGGTGATGGCAGTGCTCCGGGAACTGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:48060404|48060609 hsa-miR-31-5p 0 0 1
chr17:48060404|48060609 hsa-miR-31-3p 0 0 1
chr17:48060404|48060609 hsa-miR-34a-5p 0 0 1
chr17:48060404|48060609 hsa-miR-34a-3p 0 0 1
chr17:48060404|48060609 hsa-miR-122-5p 0 0 1
chr17:48060404|48060609 hsa-miR-122-3p 0 0 1
chr17:48060404|48060609 hsa-miR-449a 0 0 1
chr17:48060404|48060609 hsa-miR-484 0 0 1
chr17:48060404|48060609 hsa-miR-600 0 0 1
chr17:48060404|48060609 hsa-miR-608 1 0 1
chr17:48060404|48060609 hsa-miR-622 0 0 1
chr17:48060404|48060609 hsa-miR-449b-5p 0 0 1
chr17:48060404|48060609 hsa-miR-449b-3p 0 0 1
chr17:48060404|48060609 hsa-miR-760 1 0 1
chr17:48060404|48060609 hsa-miR-920 1 0 1
chr17:48060404|48060609 hsa-miR-1203 0 0 1
chr17:48060404|48060609 hsa-miR-1294 0 0 1
chr17:48060404|48060609 hsa-miR-1257 0 0 1
chr17:48060404|48060609 hsa-miR-1266-5p 0 0 1
chr17:48060404|48060609 hsa-miR-1266-3p 0 0 1
chr17:48060404|48060609 hsa-miR-491-5p 0 0 1
chr17:48060404|48060609 hsa-miR-423-5p 1 0 1
chr17:48060404|48060609 hsa-miR-34c-5p 1 0 1
chr17:48060404|48060609 hsa-miR-184 1 0 0
chr17:48060404|48060609 hsa-miR-564 1 0 0
chr17:48060404|48060609 hsa-miR-638 1 0 0
chr17:48060404|48060609 hsa-miR-658 1 0 0
chr17:48060404|48060609 hsa-miR-762 1 0 0
chr17:48060404|48060609 hsa-miR-765 1 0 0
chr17:48060404|48060609 hsa-miR-1293 1 0 0
chr17:48060404|48060609 hsa-miR-1275 1 0 0
chr17:48060404|48060609 hsa-miR-1321 1 0 0
chr17:48060404|48060609 hsa-miR-2861 1 0 0
chr17:48060404|48060609 hsa-miR-3154 1 0 0
chr17:48060404|48060609 hsa-miR-3155a 1 0 0
chr17:48060404|48060609 hsa-miR-3175 1 0 0
chr17:48060404|48060609 hsa-miR-3188 1 0 0
chr17:48060404|48060609 hsa-miR-3196 1 0 0
chr17:48060404|48060609 hsa-miR-4270 1 0 0
chr17:48060404|48060609 hsa-miR-3652 1 0 0
chr17:48060404|48060609 hsa-miR-3665 1 0 0
chr17:48060404|48060609 hsa-miR-3936 1 0 0
chr17:48060404|48060609 hsa-miR-3937 1 0 0
chr17:48060404|48060609 hsa-miR-4430 1 0 0
chr17:48060404|48060609 hsa-miR-4442 1 0 0
chr17:48060404|48060609 hsa-miR-3135b 1 0 0
chr17:48060404|48060609 hsa-miR-4462 1 0 0
chr17:48060404|48060609 hsa-miR-4465 1 0 0
chr17:48060404|48060609 hsa-miR-3689c 1 0 0
chr17:48060404|48060609 hsa-miR-3155b 1 0 0
chr17:48060404|48060609 hsa-miR-4498 1 0 0
chr17:48060404|48060609 hsa-miR-4505 1 0 0
chr17:48060404|48060609 hsa-miR-4510 1 0 0
chr17:48060404|48060609 hsa-miR-4516 1 0 0
chr17:48060404|48060609 hsa-miR-4525 1 0 0
chr17:48060404|48060609 hsa-miR-4534 1 0 0
chr17:48060404|48060609 hsa-miR-4538 1 0 0
chr17:48060404|48060609 hsa-miR-4651 1 0 0
chr17:48060404|48060609 hsa-miR-4673 1 0 0
chr17:48060404|48060609 hsa-miR-4675 1 0 0
chr17:48060404|48060609 hsa-miR-4682 1 0 0
chr17:48060404|48060609 hsa-miR-4706 1 0 0
chr17:48060404|48060609 hsa-miR-4721 1 0 0
chr17:48060404|48060609 hsa-miR-4734 1 0 0
chr17:48060404|48060609 hsa-miR-4739 1 0 0
chr17:48060404|48060609 hsa-miR-4741 1 0 0
chr17:48060404|48060609 hsa-miR-4779 1 0 0
chr17:48060404|48060609 hsa-miR-5194 1 0 0
chr17:48060404|48060609 hsa-miR-5572 1 0 0
chr17:48060404|48060609 hsa-miR-5683 1 0 0
chr17:48060404|48060609 hsa-miR-5698 1 0 0
chr17:48060404|48060609 hsa-miR-5739 1 0 0
chr17:48060404|48060609 hsa-miR-5787 1 0 0
chr17:48060404|48060609 hsa-miR-6075 1 0 0
chr17:48060404|48060609 hsa-miR-6081 1 0 0
chr17:48060404|48060609 hsa-miR-6088 1 0 0
chr17:48060404|48060609 hsa-miR-6127 1 0 0
chr17:48060404|48060609 hsa-miR-6129 1 0 0
chr17:48060404|48060609 hsa-miR-6130 1 0 0
chr17:48060404|48060609 hsa-miR-6132 1 0 0
chr17:48060404|48060609 hsa-miR-6133 1 0 0
chr17:48060404|48060609 hsa-miR-6134 1 0 0
chr17:48060404|48060609 hsa-miR-8072 1 0 0
chr17:48060404|48060609 hsa-miR-8082 1 1 0
chr17:48060404|48060609 hsa-miR-8085 1 0 0
chr17:48060404|48060609 hsa-miR-8089 1 0 0
chr17:48060404|48060609 hsa-miR-12114 1 0 0
chr17:48060404|48060609 hsa-miR-12128 1 0 0
chr17:48060404|48060609 hsa-miR-4433b-3p 1 0 0
chr17:48060404|48060609 hsa-miR-6734-5p 1 0 0
chr17:48060404|48060609 hsa-miR-504-3p 1 0 0
chr17:48060404|48060609 hsa-miR-6747-5p 1 0 0
chr17:48060404|48060609 hsa-miR-4433a-3p 1 0 0
chr17:48060404|48060609 hsa-miR-3150a-3p 1 0 0
chr17:48060404|48060609 hsa-miR-7106-5p 1 1 0
chr17:48060404|48060609 hsa-miR-6825-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6894-5p 1 0 0
chr17:48060404|48060609 hsa-miR-1972 1 0 0
chr17:48060404|48060609 hsa-miR-125a-3p 1 0 0
chr17:48060404|48060609 hsa-miR-6854-5p 0 1 0
chr17:48060404|48060609 hsa-miR-6799-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6728-5p 1 0 0
chr17:48060404|48060609 hsa-miR-8071 1 0 0
chr17:48060404|48060609 hsa-miR-6515-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6089 1 0 0
chr17:48060404|48060609 hsa-miR-6757-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6880-5p 1 1 0
chr17:48060404|48060609 hsa-miR-6890-5p 1 0 0
chr17:48060404|48060609 hsa-miR-4474-3p 1 0 0
chr17:48060404|48060609 hsa-miR-4655-5p 1 0 0
chr17:48060404|48060609 hsa-miR-8069 1 0 0
chr17:48060404|48060609 hsa-miR-3605-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6716-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6871-5p 1 1 0
chr17:48060404|48060609 hsa-miR-3151-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6748-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6732-5p 1 0 0
chr17:48060404|48060609 hsa-miR-2467-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6798-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6760-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6782-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6514-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6888-5p 1 0 0
chr17:48060404|48060609 hsa-miR-30b-3p 1 0 0
chr17:48060404|48060609 hsa-miR-5006-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6884-3p 0 1 0
chr17:48060404|48060609 hsa-miR-6786-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6835-5p 1 0 0
chr17:48060404|48060609 hsa-miR-1226-5p 1 0 0
chr17:48060404|48060609 hsa-miR-4640-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6753-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6823-5p 1 0 0
chr17:48060404|48060609 hsa-miR-92b-5p 1 0 0
chr17:48060404|48060609 hsa-miR-877-5p 1 0 0
chr17:48060404|48060609 hsa-miR-4717-3p 1 0 0
chr17:48060404|48060609 hsa-miR-6749-5p 1 0 0
chr17:48060404|48060609 hsa-miR-4787-5p 1 0 0
chr17:48060404|48060609 hsa-miR-2681-3p 1 0 0
chr17:48060404|48060609 hsa-miR-149-3p 1 0 0
chr17:48060404|48060609 hsa-miR-3616-3p 1 0 0
chr17:48060404|48060609 hsa-miR-6824-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6789-5p 1 0 0
chr17:48060404|48060609 hsa-miR-3162-5p 1 0 0
chr17:48060404|48060609 hsa-miR-4684-3p 1 0 0
chr17:48060404|48060609 hsa-miR-5010-5p 1 0 0
chr17:48060404|48060609 hsa-miR-4776-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6864-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6792-5p 1 0 0
chr17:48060404|48060609 hsa-miR-28-5p 0 1 0
chr17:48060404|48060609 hsa-miR-3177-3p 1 0 0
chr17:48060404|48060609 hsa-miR-181d-3p 1 0 0
chr17:48060404|48060609 hsa-miR-6890-3p 0 1 0
chr17:48060404|48060609 hsa-miR-1207-5p 1 0 0
chr17:48060404|48060609 hsa-miR-1233-5p 1 0 0
chr17:48060404|48060609 hsa-miR-1273h-5p 1 0 0
chr17:48060404|48060609 hsa-miR-3689b-3p 1 0 0
chr17:48060404|48060609 hsa-miR-4763-3p 1 0 0
chr17:48060404|48060609 hsa-miR-6769b-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6778-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6787-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6812-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6870-5p 1 1 0
chr17:48060404|48060609 hsa-miR-6893-5p 1 0 0
chr17:48060404|48060609 hsa-miR-1343-5p 1 0 0
chr17:48060404|48060609 hsa-miR-5001-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6726-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6737-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6752-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6754-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6756-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6803-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6819-5p 1 1 0
chr17:48060404|48060609 hsa-miR-6842-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6851-5p 1 0 0
chr17:48060404|48060609 hsa-miR-7110-5p 1 0 0
chr17:48060404|48060609 hsa-miR-11181-3p 1 0 0
chr17:48060404|48060609 hsa-miR-1249-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6722-3p 1 0 0
chr17:48060404|48060609 hsa-miR-6774-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6797-5p 1 1 0
chr17:48060404|48060609 hsa-miR-6808-5p 1 0 0
chr17:48060404|48060609 hsa-miR-7111-5p 1 1 0
chr17:48060404|48060609 hsa-miR-4728-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6780b-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6836-5p 1 0 0
chr17:48060404|48060609 hsa-miR-1237-5p 1 0 0
chr17:48060404|48060609 hsa-miR-328-5p 1 0 0
chr17:48060404|48060609 hsa-miR-3689a-3p 1 0 0
chr17:48060404|48060609 hsa-miR-449c-5p 1 0 0
chr17:48060404|48060609 hsa-miR-4632-5p 1 0 0
chr17:48060404|48060609 hsa-miR-4649-5p 1 0 0
chr17:48060404|48060609 hsa-miR-4685-5p 1 0 0
chr17:48060404|48060609 hsa-miR-4726-5p 1 0 0
chr17:48060404|48060609 hsa-miR-4745-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6729-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6738-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6794-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6795-5p 1 1 0
chr17:48060404|48060609 hsa-miR-6846-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6848-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6887-5p 1 1 0
chr17:48060404|48060609 hsa-miR-6889-5p 1 0 0
chr17:48060404|48060609 hsa-miR-4723-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6831-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6885-5p 1 0 0
chr17:48060404|48060609 hsa-miR-939-5p 1 0 0
chr17:48060404|48060609 hsa-miR-4769-5p 1 0 0
chr17:48060404|48060609 hsa-miR-34b-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6511b-5p 1 0 0
chr17:48060404|48060609 hsa-miR-3198 1 0 0
chr17:48060404|48060609 hsa-miR-6731-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6856-5p 1 0 0
chr17:48060404|48060609 hsa-miR-1914-3p 1 0 0
chr17:48060404|48060609 hsa-miR-4665-5p 1 0 0
chr17:48060404|48060609 hsa-miR-10398-3p 0 1 0
chr17:48060404|48060609 hsa-miR-4747-5p 1 0 0
chr17:48060404|48060609 hsa-miR-6891-5p 1 0 0
chr17:48060404|48060609 hsa-miR-4716-3p 1 0 0
chr17:48060404|48060609 hsa-miR-6785-5p 1 0 0
chr17:48060404|48060609 hsa-miR-2682-5p 1 0 0
chr17:48060404|48060609 hsa-miR-10395-5p 0 1 0
chr17:48060404|48060609 hsa-miR-6811-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:48060404|48060609
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MCMPSSPGPVFVFPTPHRLPELFCKLG
Nucleotide Sequence ATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTTCCCCACCCCTCACAGACTGCCTGAGCTCTTCTGTAAGCTGGGGTAG
CircID chr17:48060404|48060609
ORF Type ORF2
Protein Length 63
Nucleotide Length 189
Protein Sequence MPCHSISLRAPATPELRLPLSPSEPACVCRPPLVRCLCSPPLTDCLSSSVSWGRVMAVLRELG
Nucleotide Sequence CTGCCTTGCCACTCCATCTCCCTCCGTGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTTCCCCACCCCTCACAGACTGCCTGAGCTCTTCTGTAAGCTGGGGTAGGGTGATGGCAGTGCTCCGGGAACTGGGC
CircID chr17:48060404|48060609
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MQALMETMGASAQGWLEHGGRWSGKAVNDMRD
Nucleotide Sequence ATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCACGGAGGGAGATGGAGTGGCAAGGCAGTGAATGACATGCGTGAT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab