CircRNA Information

General Information
circRNA Basic Information
CircID chr17:48121841|48122122
Strand -
CircType exon
Host Gene ENSG00000002919.13;
Algorism CIRI2;
Sequence CCGTATGTGGCAAATTCTAAGCTGCCATATTGAACATCATCCCACTGGGAGTGGTTATGTTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAGGCTGGCCTCTTGCCTACCTCCTTGCATGGACAGGGGGATGAATATTTACTTTCCCACCTCCTTGCTTTTTCTTTCACTGATACCACTGAATGGAACTGGTGCTGTGACTCCTGCTGCTGGGGATTTATGTCCCGAGACCTTAGCCTGGCTGAGTGGAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:48121841|48122122 hsa-let-7b-5p 0 0 1
chr17:48121841|48122122 hsa-let-7b-3p 0 0 1
chr17:48121841|48122122 hsa-let-7c-5p 0 0 1
chr17:48121841|48122122 hsa-let-7c-3p 0 0 1
chr17:48121841|48122122 hsa-let-7d-5p 0 0 1
chr17:48121841|48122122 hsa-let-7d-3p 0 0 1
chr17:48121841|48122122 hsa-let-7e-5p 0 0 1
chr17:48121841|48122122 hsa-let-7e-3p 0 0 1
chr17:48121841|48122122 hsa-miR-15a-5p 0 0 1
chr17:48121841|48122122 hsa-miR-15a-3p 0 0 1
chr17:48121841|48122122 hsa-miR-17-5p 0 0 1
chr17:48121841|48122122 hsa-miR-17-3p 0 0 1
chr17:48121841|48122122 hsa-miR-20a-5p 0 0 1
chr17:48121841|48122122 hsa-miR-20a-3p 0 0 1
chr17:48121841|48122122 hsa-miR-29a-5p 0 0 1
chr17:48121841|48122122 hsa-miR-29a-3p 0 0 1
chr17:48121841|48122122 hsa-miR-31-5p 0 0 1
chr17:48121841|48122122 hsa-miR-31-3p 0 0 1
chr17:48121841|48122122 hsa-miR-93-5p 0 0 1
chr17:48121841|48122122 hsa-miR-93-3p 0 0 1
chr17:48121841|48122122 hsa-miR-98-5p 0 0 1
chr17:48121841|48122122 hsa-miR-98-3p 0 0 1
chr17:48121841|48122122 hsa-miR-106a-5p 0 0 1
chr17:48121841|48122122 hsa-miR-106a-3p 0 0 1
chr17:48121841|48122122 hsa-miR-183-5p 0 0 1
chr17:48121841|48122122 hsa-miR-183-3p 0 0 1
chr17:48121841|48122122 hsa-miR-214-5p 0 0 1
chr17:48121841|48122122 hsa-miR-214-3p 0 0 1
chr17:48121841|48122122 hsa-let-7g-5p 0 0 1
chr17:48121841|48122122 hsa-let-7g-3p 0 0 1
chr17:48121841|48122122 hsa-let-7i-5p 0 0 1
chr17:48121841|48122122 hsa-let-7i-3p 0 0 1
chr17:48121841|48122122 hsa-miR-15b-5p 0 0 1
chr17:48121841|48122122 hsa-miR-15b-3p 0 0 1
chr17:48121841|48122122 hsa-miR-195-5p 0 0 1
chr17:48121841|48122122 hsa-miR-195-3p 0 0 1
chr17:48121841|48122122 hsa-miR-106b-5p 0 0 1
chr17:48121841|48122122 hsa-miR-106b-3p 0 0 1
chr17:48121841|48122122 hsa-miR-29c-5p 0 0 1
chr17:48121841|48122122 hsa-miR-29c-3p 0 0 1
chr17:48121841|48122122 hsa-miR-302a-5p 0 0 1
chr17:48121841|48122122 hsa-miR-302a-3p 0 0 1
chr17:48121841|48122122 hsa-miR-302b-5p 0 0 1
chr17:48121841|48122122 hsa-miR-302b-3p 0 0 1
chr17:48121841|48122122 hsa-miR-302c-5p 0 0 1
chr17:48121841|48122122 hsa-miR-302c-3p 0 0 1
chr17:48121841|48122122 hsa-miR-302d-5p 0 0 1
chr17:48121841|48122122 hsa-miR-302d-3p 0 0 1
chr17:48121841|48122122 hsa-miR-372-5p 0 0 1
chr17:48121841|48122122 hsa-miR-372-3p 0 0 1
chr17:48121841|48122122 hsa-miR-373-5p 0 0 1
chr17:48121841|48122122 hsa-miR-373-3p 0 0 1
chr17:48121841|48122122 hsa-miR-424-5p 0 0 1
chr17:48121841|48122122 hsa-miR-424-3p 0 0 1
chr17:48121841|48122122 hsa-miR-20b-5p 0 0 1
chr17:48121841|48122122 hsa-miR-20b-3p 0 0 1
chr17:48121841|48122122 hsa-miR-497-5p 0 0 1
chr17:48121841|48122122 hsa-miR-497-3p 0 0 1
chr17:48121841|48122122 hsa-miR-520e-5p 0 0 1
chr17:48121841|48122122 hsa-miR-520e-3p 0 0 1
chr17:48121841|48122122 hsa-miR-520b-5p 0 0 1
chr17:48121841|48122122 hsa-miR-520b-3p 0 0 1
chr17:48121841|48122122 hsa-miR-519d-5p 0 0 1
chr17:48121841|48122122 hsa-miR-519d-3p 0 0 1
chr17:48121841|48122122 hsa-miR-520g-5p 0 0 1
chr17:48121841|48122122 hsa-miR-520g-3p 0 0 1
chr17:48121841|48122122 hsa-miR-520h 0 0 1
chr17:48121841|48122122 hsa-miR-545-5p 0 0 1
chr17:48121841|48122122 hsa-miR-545-3p 0 0 1
chr17:48121841|48122122 hsa-miR-559 0 0 1
chr17:48121841|48122122 hsa-miR-605-5p 0 0 1
chr17:48121841|48122122 hsa-miR-605-3p 0 0 1
chr17:48121841|48122122 hsa-miR-548e-5p 0 0 1
chr17:48121841|48122122 hsa-miR-548e-3p 0 0 1
chr17:48121841|48122122 hsa-miR-548j-5p 0 0 1
chr17:48121841|48122122 hsa-miR-548j-3p 0 0 1
chr17:48121841|48122122 hsa-miR-302e 0 0 1
chr17:48121841|48122122 hsa-miR-548p 0 1 1
chr17:48121841|48122122 hsa-miR-512-5p 0 1 1
chr17:48121841|48122122 hsa-miR-532-3p 0 1 1
chr17:48121841|48122122 hsa-miR-885-3p 0 0 1
chr17:48121841|48122122 hsa-miR-339-5p 0 1 1
chr17:48121841|48122122 hsa-miR-188-3p 0 1 1
chr17:48121841|48122122 hsa-miR-520d-3p 0 0 1
chr17:48121841|48122122 hsa-miR-548b-5p 0 0 1
chr17:48121841|48122122 hsa-miR-548d-5p 0 0 1
chr17:48121841|48122122 hsa-miR-520a-3p 0 0 1
chr17:48121841|48122122 hsa-miR-520c-3p 0 0 1
chr17:48121841|48122122 hsa-miR-548a-3p 0 0 1
chr17:48121841|48122122 hsa-miR-548c-5p 0 0 1
chr17:48121841|48122122 hsa-miR-548a-5p 0 0 1
chr17:48121841|48122122 hsa-miR-548i 0 0 1
chr17:48121841|48122122 hsa-miR-16 0 0 1
chr17:48121841|48122122 hsa-miR-664 0 0 1
chr17:48121841|48122122 hsa-miR-548f 0 0 1
chr17:48121841|48122122 hsa-let-7a 0 0 1
chr17:48121841|48122122 hsa-let-7f 0 0 1
chr17:48121841|48122122 hsa-miR-29b 0 0 1
chr17:48121841|48122122 hsa-miR-548h 0 0 1
chr17:48121841|48122122 hsa-miR-761 0 1 0
chr17:48121841|48122122 hsa-miR-298 1 0 0
chr17:48121841|48122122 hsa-miR-3153 0 1 0
chr17:48121841|48122122 hsa-miR-4298 1 0 0
chr17:48121841|48122122 hsa-miR-4421 0 1 0
chr17:48121841|48122122 hsa-miR-4458 0 1 0
chr17:48121841|48122122 hsa-miR-2392 1 0 0
chr17:48121841|48122122 hsa-miR-4530 0 1 0
chr17:48121841|48122122 hsa-miR-4651 1 0 0
chr17:48121841|48122122 hsa-miR-4739 1 1 0
chr17:48121841|48122122 hsa-miR-6124 1 1 0
chr17:48121841|48122122 hsa-miR-12118 0 1 0
chr17:48121841|48122122 hsa-miR-3157-5p 1 1 0
chr17:48121841|48122122 hsa-miR-6799-5p 1 0 0
chr17:48121841|48122122 hsa-miR-5187-5p 0 1 0
chr17:48121841|48122122 hsa-miR-4722-5p 1 1 0
chr17:48121841|48122122 hsa-miR-7160-5p 0 1 0
chr17:48121841|48122122 hsa-miR-6727-5p 1 0 0
chr17:48121841|48122122 hsa-miR-6806-5p 0 1 0
chr17:48121841|48122122 hsa-miR-491-5p 1 0 0
chr17:48121841|48122122 hsa-miR-503-5p 1 0 0
chr17:48121841|48122122 hsa-miR-6748-5p 1 0 0
chr17:48121841|48122122 hsa-miR-6732-5p 1 1 0
chr17:48121841|48122122 hsa-miR-6782-5p 1 0 0
chr17:48121841|48122122 hsa-miR-3194-5p 0 1 0
chr17:48121841|48122122 hsa-miR-1226-5p 1 0 0
chr17:48121841|48122122 hsa-miR-6853-5p 1 0 0
chr17:48121841|48122122 hsa-miR-4738-3p 0 1 0
chr17:48121841|48122122 hsa-miR-4786-3p 1 1 0
chr17:48121841|48122122 hsa-miR-4787-5p 1 0 0
chr17:48121841|48122122 hsa-miR-194-3p 0 1 0
chr17:48121841|48122122 hsa-miR-181b-5p 0 1 0
chr17:48121841|48122122 hsa-miR-3065-3p 0 1 0
chr17:48121841|48122122 hsa-miR-4708-3p 1 0 0
chr17:48121841|48122122 hsa-miR-744-5p 1 0 0
chr17:48121841|48122122 hsa-miR-4649-3p 1 0 0
chr17:48121841|48122122 hsa-miR-6729-3p 0 1 0
chr17:48121841|48122122 hsa-miR-181a-5p 0 1 0
chr17:48121841|48122122 hsa-miR-29b-3p 0 1 0
chr17:48121841|48122122 hsa-miR-6816-5p 1 0 0
chr17:48121841|48122122 hsa-miR-6752-5p 1 0 0
chr17:48121841|48122122 hsa-miR-6756-5p 1 0 0
chr17:48121841|48122122 hsa-miR-6803-5p 1 0 0
chr17:48121841|48122122 hsa-miR-6842-5p 1 0 0
chr17:48121841|48122122 hsa-miR-6851-5p 1 1 0
chr17:48121841|48122122 hsa-miR-7110-5p 1 0 0
chr17:48121841|48122122 hsa-miR-6722-3p 1 0 0
chr17:48121841|48122122 hsa-miR-6808-5p 0 1 0
chr17:48121841|48122122 hsa-miR-4769-5p 0 1 0
chr17:48121841|48122122 hsa-miR-3173-3p 0 1 0
chr17:48121841|48122122 hsa-miR-6891-5p 0 1 0
chr17:48121841|48122122 hsa-miR-1301-5p 0 1 0
chr17:48121841|48122122 hsa-miR-6838-5p 0 1 0
chr17:48121841|48122122 hsa-miR-3059-3p 0 1 0
chr17:48121841|48122122 hsa-miR-181d-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:48121841|48122122
ORF Type ORF1
Protein Length 70
Nucleotide Length 210
Protein Sequence MAGFSFCCSPRALCLWEAGLLPTSLHGQGDEYLLSHLLAFSFTDTTEWNWCCDSCCWGFMSRDLSLAEWS
Nucleotide Sequence TTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAGGCTGGCCTCTTGCCTACCTCCTTGCATGGACAGGGGGATGAATATTTACTTTCCCACCTCCTTGCTTTTTCTTTCACTGATACCACTGAATGGAACTGGTGCTGTGACTCCTGCTGCTGGGGATTTATGTCCCGAGACCTTAGCCTGGCTGAGTGGAGC

CircID chr17:48121841|48122122
ORF Type ORF2
Protein Length 92
Nucleotide Length 276
Protein Sequence MWQILSCHIEHHPTGSGYVVSPSWLASVFAVALEHFVCGRLASCLPPCMDRGMNIYFPTSLLFLSLIPLNGTGAVTPAAGDLCPETLAWLSG
Nucleotide Sequence ATGTGGCAAATTCTAAGCTGCCATATTGAACATCATCCCACTGGGAGTGGTTATGTTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAGGCTGGCCTCTTGCCTACCTCCTTGCATGGACAGGGGGATGAATATTTACTTTCCCACCTCCTTGCTTTTTCTTTCACTGATACCACTGAATGGAACTGGTGCTGTGACTCCTGCTGCTGGGGATTTATGTCCCGAGACCTTAGCCTGGCTGAGTGGA

CircID chr17:48121841|48122122
ORF Type ORF3
Protein Length 33
Nucleotide Length 102
Protein Sequence MSMQGGRQEASLPQTKCSRATAKTEASQDGDTT
Nucleotide Sequence CTGTCCATGCAAGGAGGTAGGCAAGAGGCCAGCCTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAACATAA

CircID chr17:48121841|48122122
ORF Type ORF4
Protein Length 28
Nucleotide Length 84
Protein Sequence MKPAKMGIQHNHSQWDDVQYGSLEFATY
Nucleotide Sequence CTGAAGCCAGCCAAGATGGGGATACAACATAACCACTCCCAGTGGGATGATGTTCAATATGGCAGCTTAGAATTTGCCACATAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites