CircNet

General Information

circRNA Basic Information

CircID	chr17:48935144\|48935286
Strand	+
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTCTGCCACCGCGCCTGGCCGCCTGGCTAATTTTTGTATTTTTAGTAGTGATGGGGTTTCACGTTGTTGGCCAGGCTGGTTTTGAACTCCTGGCCTCAAGTGATCTGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:48935144\|48935286	hsa-miR-575	0	0	1
chr17:48935144\|48935286	hsa-miR-1323	0	0	1
chr17:48935144\|48935286	hsa-miR-665	0	0	1
chr17:48935144\|48935286	hsa-miR-1304-5p	0	0	1
chr17:48935144\|48935286	hsa-miR-1304-3p	0	0	1
chr17:48935144\|48935286	hsa-miR-548o-3p	0	0	1
chr17:48935144\|48935286	hsa-miR-548o	0	0	1
chr17:48935144\|48935286	hsa-miR-485-5p	0	0	1
chr17:48935144\|48935286	hsa-miR-34c-3p	1	0	1
chr17:48935144\|48935286	hsa-miR-548c-3p	0	0	1
chr17:48935144\|48935286	hsa-miR-606	0	1	0
chr17:48935144\|48935286	hsa-miR-1469	1	0	0
chr17:48935144\|48935286	hsa-miR-3665	1	0	0
chr17:48935144\|48935286	hsa-miR-3937	0	1	0
chr17:48935144\|48935286	hsa-miR-5689	1	0	0
chr17:48935144\|48935286	hsa-miR-6840-3p	1	0	0
chr17:48935144\|48935286	hsa-miR-671-5p	1	0	0
chr17:48935144\|48935286	hsa-miR-6089	1	0	0
chr17:48935144\|48935286	hsa-miR-3189-5p	1	0	0
chr17:48935144\|48935286	hsa-miR-6849-3p	0	1	0
chr17:48935144\|48935286	hsa-miR-6821-5p	1	0	0
chr17:48935144\|48935286	hsa-miR-3190-5p	0	1	0
chr17:48935144\|48935286	hsa-miR-20b-3p	0	1	0
chr17:48935144\|48935286	hsa-miR-1273h-5p	0	1	0
chr17:48935144\|48935286	hsa-miR-4649-5p	1	0	0
chr17:48935144\|48935286	hsa-miR-1285-3p	0	1	0
chr17:48935144\|48935286	hsa-miR-6884-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:48935144\|48935286
ORF Type	ORF1
Protein Length	32
Nucleotide Length	99
Protein Sequence	MGLQVSATAPGRLANFCIFSSDGVSRCWPGWF
Nucleotide Sequence	CTGGGATTACAGGTGTCTGCCACCGCGCCTGGCCGCCTGGCTAATTTTTGTATTTTTAGTAGTGATGGGGTTTCACGTTGTTGGCCAGGCTGGTTTTGA

CircID	chr17:48935144\|48935286
ORF Type	ORF2
Protein Length	35
Nucleotide Length	105
Protein Sequence	MPPRLAAWLIFVFLVVMGFHVVGQAGFELLASSDL
Nucleotide Sequence	CTGCCACCGCGCCTGGCCGCCTGGCTAATTTTTGTATTTTTAGTAGTGATGGGGTTTCACGTTGTTGGCCAGGCTGGTTTTGAACTCCTGGCCTCAAGTGATCTG

CircID	chr17:48935144\|48935286
ORF Type	ORF3
Protein Length	42
Nucleotide Length	129
Protein Sequence	MRPGVQNQPGQQRETPSLLKIQKLARRPGAVADTCNPSTLGG
Nucleotide Sequence	TTGAGGCCAGGAGTTCAAAACCAGCCTGGCCAACAACGTGAAACCCCATCACTACTAAAAATACAAAAATTAGCCAGGCGGCCAGGCGCGGTGGCAGACACCTGTAATCCCAGCACTTTGGGAGGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information