CircRNA Information

General Information
circRNA Basic Information
CircID chr17:4893521|4893668
Strand +
CircType exon
Host Gene ENSG00000141503.14;
Algorism CIRI2;
Sequence CTCTTCCCCACTGCCACTTCCCCTCCCTCCCTGTGCCTTGGAGTGGGAGGGCCCCACTCCCGATGCCGTACCGGCCCCCAGGGGTATCTCTGCTCCCCTCTGCTGGCCCGCCTTCGCCTTCCTCCTCGTCGTCCTCACTGCTTTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:4893521|4893668 hsa-miR-34a-5p 0 0 1
chr17:4893521|4893668 hsa-miR-34a-3p 0 0 1
chr17:4893521|4893668 hsa-miR-449a 0 0 1
chr17:4893521|4893668 hsa-miR-506-5p 0 0 1
chr17:4893521|4893668 hsa-miR-506-3p 0 0 1
chr17:4893521|4893668 hsa-miR-637 1 1 1
chr17:4893521|4893668 hsa-miR-449b-5p 0 0 1
chr17:4893521|4893668 hsa-miR-449b-3p 0 0 1
chr17:4893521|4893668 hsa-miR-922 0 1 1
chr17:4893521|4893668 hsa-miR-939-5p 0 0 1
chr17:4893521|4893668 hsa-miR-939-3p 0 0 1
chr17:4893521|4893668 hsa-miR-1321 1 1 1
chr17:4893521|4893668 hsa-miR-491-5p 0 0 1
chr17:4893521|4893668 hsa-miR-1224-5p 1 1 1
chr17:4893521|4893668 hsa-miR-532-3p 0 1 1
chr17:4893521|4893668 hsa-miR-331-3p 0 0 1
chr17:4893521|4893668 hsa-miR-34c-5p 0 0 1
chr17:4893521|4893668 hsa-miR-151-5p 0 0 1
chr17:4893521|4893668 hsa-miR-220c 0 0 1
chr17:4893521|4893668 hsa-miR-124 0 0 1
chr17:4893521|4893668 hsa-miR-206 1 0 0
chr17:4893521|4893668 hsa-miR-608 1 0 0
chr17:4893521|4893668 hsa-miR-663a 1 0 0
chr17:4893521|4893668 hsa-miR-658 1 0 0
chr17:4893521|4893668 hsa-miR-762 1 0 0
chr17:4893521|4893668 hsa-miR-765 1 0 0
chr17:4893521|4893668 hsa-miR-921 1 0 0
chr17:4893521|4893668 hsa-miR-1275 1 0 0
chr17:4893521|4893668 hsa-miR-3131 1 0 0
chr17:4893521|4893668 hsa-miR-3141 1 0 0
chr17:4893521|4893668 hsa-miR-3153 1 0 0
chr17:4893521|4893668 hsa-miR-3175 1 0 0
chr17:4893521|4893668 hsa-miR-3185 1 0 0
chr17:4893521|4893668 hsa-miR-3196 1 0 0
chr17:4893521|4893668 hsa-miR-3197 1 0 0
chr17:4893521|4893668 hsa-miR-4298 1 0 0
chr17:4893521|4893668 hsa-miR-4270 1 1 0
chr17:4893521|4893668 hsa-miR-4271 1 1 0
chr17:4893521|4893668 hsa-miR-3621 1 0 0
chr17:4893521|4893668 hsa-miR-3916 1 0 0
chr17:4893521|4893668 hsa-miR-3689c 1 0 0
chr17:4893521|4893668 hsa-miR-4484 1 0 0
chr17:4893521|4893668 hsa-miR-4488 1 0 0
chr17:4893521|4893668 hsa-miR-4498 1 0 0
chr17:4893521|4893668 hsa-miR-4508 1 0 0
chr17:4893521|4893668 hsa-miR-4510 1 1 0
chr17:4893521|4893668 hsa-miR-4514 1 0 0
chr17:4893521|4893668 hsa-miR-4519 1 0 0
chr17:4893521|4893668 hsa-miR-4525 1 0 0
chr17:4893521|4893668 hsa-miR-4530 0 1 0
chr17:4893521|4893668 hsa-miR-1587 1 0 0
chr17:4893521|4893668 hsa-miR-3960 1 0 0
chr17:4893521|4893668 hsa-miR-3978 1 1 0
chr17:4893521|4893668 hsa-miR-4651 1 0 0
chr17:4893521|4893668 hsa-miR-4688 1 0 0
chr17:4893521|4893668 hsa-miR-4689 1 0 0
chr17:4893521|4893668 hsa-miR-4692 1 0 0
chr17:4893521|4893668 hsa-miR-4706 1 0 0
chr17:4893521|4893668 hsa-miR-4710 1 0 0
chr17:4893521|4893668 hsa-miR-4739 1 1 0
chr17:4893521|4893668 hsa-miR-4751 1 0 0
chr17:4893521|4893668 hsa-miR-4767 1 0 0
chr17:4893521|4893668 hsa-miR-5192 1 0 0
chr17:4893521|4893668 hsa-miR-5194 1 0 0
chr17:4893521|4893668 hsa-miR-5698 1 1 0
chr17:4893521|4893668 hsa-miR-6081 0 1 0
chr17:4893521|4893668 hsa-miR-6085 1 0 0
chr17:4893521|4893668 hsa-miR-6090 1 0 0
chr17:4893521|4893668 hsa-miR-6125 1 0 0
chr17:4893521|4893668 hsa-miR-6126 1 0 0
chr17:4893521|4893668 hsa-miR-6127 1 1 0
chr17:4893521|4893668 hsa-miR-6130 0 1 0
chr17:4893521|4893668 hsa-miR-6133 1 1 0
chr17:4893521|4893668 hsa-miR-7515 1 0 0
chr17:4893521|4893668 hsa-miR-7704 1 0 0
chr17:4893521|4893668 hsa-miR-8072 1 0 0
chr17:4893521|4893668 hsa-miR-8085 1 0 0
chr17:4893521|4893668 hsa-miR-8089 1 0 0
chr17:4893521|4893668 hsa-miR-9899 1 0 0
chr17:4893521|4893668 hsa-miR-135a-3p 1 0 0
chr17:4893521|4893668 hsa-miR-150-3p 1 0 0
chr17:4893521|4893668 hsa-miR-92a-2-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6734-5p 1 1 0
chr17:4893521|4893668 hsa-miR-504-3p 1 0 0
chr17:4893521|4893668 hsa-miR-6747-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6765-5p 1 0 0
chr17:4893521|4893668 hsa-miR-7106-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6825-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6894-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6799-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6510-5p 0 1 0
chr17:4893521|4893668 hsa-miR-3622a-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6089 1 0 0
chr17:4893521|4893668 hsa-miR-3192-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6757-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6880-5p 1 0 0
chr17:4893521|4893668 hsa-miR-7847-3p 1 0 0
chr17:4893521|4893668 hsa-miR-4695-5p 1 0 0
chr17:4893521|4893668 hsa-miR-4722-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6730-5p 1 0 0
chr17:4893521|4893668 hsa-miR-7845-5p 1 0 0
chr17:4893521|4893668 hsa-miR-3605-5p 1 0 0
chr17:4893521|4893668 hsa-miR-3180-3p 1 0 0
chr17:4893521|4893668 hsa-miR-185-3p 1 0 0
chr17:4893521|4893668 hsa-miR-6732-5p 1 0 0
chr17:4893521|4893668 hsa-miR-3190-3p 1 0 0
chr17:4893521|4893668 hsa-miR-6805-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6798-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6760-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6881-5p 1 0 0
chr17:4893521|4893668 hsa-miR-2467-3p 1 1 0
chr17:4893521|4893668 hsa-miR-6782-5p 1 0 0
chr17:4893521|4893668 hsa-miR-3194-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6810-5p 1 0 0
chr17:4893521|4893668 hsa-miR-30b-3p 1 0 0
chr17:4893521|4893668 hsa-miR-4713-5p 0 1 0
chr17:4893521|4893668 hsa-miR-6786-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6852-5p 0 1 0
chr17:4893521|4893668 hsa-miR-6835-5p 1 0 0
chr17:4893521|4893668 hsa-miR-5088-5p 1 0 0
chr17:4893521|4893668 hsa-miR-7109-5p 1 0 0
chr17:4893521|4893668 hsa-miR-1226-5p 1 0 0
chr17:4893521|4893668 hsa-miR-4640-5p 1 0 0
chr17:4893521|4893668 hsa-miR-3691-5p 1 0 0
chr17:4893521|4893668 hsa-miR-1908-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6771-5p 1 1 0
chr17:4893521|4893668 hsa-miR-92b-5p 1 0 0
chr17:4893521|4893668 hsa-miR-4732-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6749-5p 1 0 0
chr17:4893521|4893668 hsa-miR-4743-5p 1 0 0
chr17:4893521|4893668 hsa-miR-149-3p 1 1 0
chr17:4893521|4893668 hsa-miR-3162-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6781-5p 1 0 0
chr17:4893521|4893668 hsa-miR-3191-3p 1 0 0
chr17:4893521|4893668 hsa-miR-1225-5p 1 0 0
chr17:4893521|4893668 hsa-miR-654-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6832-5p 1 0 0
chr17:4893521|4893668 hsa-miR-1296-3p 0 1 0
chr17:4893521|4893668 hsa-miR-513a-5p 1 0 0
chr17:4893521|4893668 hsa-miR-3156-3p 0 1 0
chr17:4893521|4893668 hsa-miR-124-3p 0 1 0
chr17:4893521|4893668 hsa-miR-10400-5p 1 0 0
chr17:4893521|4893668 hsa-miR-1207-5p 1 0 0
chr17:4893521|4893668 hsa-miR-1233-5p 1 0 0
chr17:4893521|4893668 hsa-miR-3689b-3p 1 0 0
chr17:4893521|4893668 hsa-miR-4763-3p 1 0 0
chr17:4893521|4893668 hsa-miR-6778-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6787-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6816-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6870-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6775-5p 0 1 0
chr17:4893521|4893668 hsa-miR-1343-5p 1 1 0
chr17:4893521|4893668 hsa-miR-5001-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6743-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6752-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6754-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6756-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6769a-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6803-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6813-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6842-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6851-5p 1 1 0
chr17:4893521|4893668 hsa-miR-7110-5p 1 0 0
chr17:4893521|4893668 hsa-miR-11181-3p 1 0 0
chr17:4893521|4893668 hsa-miR-1249-5p 1 1 0
chr17:4893521|4893668 hsa-miR-6722-3p 1 0 0
chr17:4893521|4893668 hsa-miR-6751-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6763-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6779-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6780a-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6797-5p 1 1 0
chr17:4893521|4893668 hsa-miR-6808-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6879-5p 1 0 0
chr17:4893521|4893668 hsa-miR-7111-5p 1 0 0
chr17:4893521|4893668 hsa-miR-3620-5p 1 0 0
chr17:4893521|4893668 hsa-miR-4728-5p 1 1 0
chr17:4893521|4893668 hsa-miR-5189-5p 1 0 0
chr17:4893521|4893668 hsa-miR-5196-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6780b-5p 1 1 0
chr17:4893521|4893668 hsa-miR-10396b-5p 1 0 0
chr17:4893521|4893668 hsa-miR-10526-3p 1 0 0
chr17:4893521|4893668 hsa-miR-1237-5p 1 0 0
chr17:4893521|4893668 hsa-miR-328-5p 1 1 0
chr17:4893521|4893668 hsa-miR-3689a-3p 1 0 0
chr17:4893521|4893668 hsa-miR-449c-5p 1 0 0
chr17:4893521|4893668 hsa-miR-4649-5p 1 0 0
chr17:4893521|4893668 hsa-miR-4685-5p 1 0 0
chr17:4893521|4893668 hsa-miR-4725-3p 1 1 0
chr17:4893521|4893668 hsa-miR-4726-5p 1 1 0
chr17:4893521|4893668 hsa-miR-4745-5p 1 1 0
chr17:4893521|4893668 hsa-miR-4749-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6729-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6735-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6738-5p 1 0 0
chr17:4893521|4893668 hsa-miR-675-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6777-5p 1 1 0
chr17:4893521|4893668 hsa-miR-6794-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6795-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6846-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6848-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6858-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6883-5p 1 1 0
chr17:4893521|4893668 hsa-miR-6887-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6889-5p 1 0 0
chr17:4893521|4893668 hsa-miR-4723-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6831-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6845-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6731-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6758-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6856-5p 1 1 0
chr17:4893521|4893668 hsa-miR-1914-3p 1 0 0
chr17:4893521|4893668 hsa-miR-3173-3p 1 0 0
chr17:4893521|4893668 hsa-miR-4747-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6876-5p 0 1 0
chr17:4893521|4893668 hsa-miR-6891-5p 1 0 0
chr17:4893521|4893668 hsa-miR-4716-3p 1 0 0
chr17:4893521|4893668 hsa-miR-6785-5p 1 1 0
chr17:4893521|4893668 hsa-miR-6724-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6791-5p 1 1 0
chr17:4893521|4893668 hsa-miR-6837-5p 1 0 0
chr17:4893521|4893668 hsa-miR-6884-5p 1 0 0
chr17:4893521|4893668 hsa-miR-128-2-5p 0 1 0
chr17:4893521|4893668 hsa-miR-2682-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:4893521|4893668
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MCLGVGGPHSRCRTGPQGYLCSPLLARLRLPPRRPHCFP
Nucleotide Sequence CTGTGCCTTGGAGTGGGAGGGCCCCACTCCCGATGCCGTACCGGCCCCCAGGGGTATCTCTGCTCCCCTCTGCTGGCCCGCCTTCGCCTTCCTCCTCGTCGTCCTCACTGCTTTCCA
CircID chr17:4893521|4893668
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MPLPLPPCALEWEGPTPDAVPAPRGISAPLCWPAFAFLLVVLTAFH
Nucleotide Sequence CTGCCACTTCCCCTCCCTCCCTGTGCCTTGGAGTGGGAGGGCCCCACTCCCGATGCCGTACCGGCCCCCAGGGGTATCTCTGCTCCCCTCTGCTGGCCCGCCTTCGCCTTCCTCCTCGTCGTCCTCACTGCTTTCCAC
CircID chr17:4893521|4893668
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MPYRPPGVSLLPSAGPPSPSSSSSSLLS
Nucleotide Sequence ATGCCGTACCGGCCCCCAGGGGTATCTCTGCTCCCCTCTGCTGGCCCGCCTTCGCCTTCCTCCTCGTCGTCCTCACTGCTTTCC
CircID chr17:4893521|4893668
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MGAGTASGVGPSHSKAQGGRGSGSGEE
Nucleotide Sequence CTGGGGGCCGGTACGGCATCGGGAGTGGGGCCCTCCCACTCCAAGGCACAGGGAGGGAGGGGAAGTGGCAGTGGGGAAGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab