CircRNA Information

General Information
circRNA Basic Information
CircID chr17:4942595|4942941
Strand +
CircType exon
Host Gene ENSG00000108523.14;
Algorism CIRI2;
Sequence CCCTTCTCGTAGACAAAGAGGGCACGCAGGTACTCGGAGCTTCTCTCCCCAATAAATACAGACGGGATCCAGATCTGCTGCTGGATTTCCTCTGCAGGGATCAAGGTGTTACTCTGGGGACTCACAACCTTCTACTCAAATCCTCTGGGAACCCTGGCATCTTGCACTTTGGCCCCACCCCACCTAAAGGATTGGCTTCTTTTCCTGAGGCCTTCAGCCTTCCCACCATCTCTGGGTCCTACTGAAAGCCCAGCTGTATAGATTCCCCCAGCCTTACCACTATTCCACACCATGTTCAGAAGTTCATTGGAATTCACATTGTGTACTACAGCGGCACCATATCCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:4942595|4942941 hsa-miR-15a-5p 0 0 1
chr17:4942595|4942941 hsa-miR-15a-3p 0 0 1
chr17:4942595|4942941 hsa-miR-17-5p 0 0 1
chr17:4942595|4942941 hsa-miR-17-3p 0 0 1
chr17:4942595|4942941 hsa-miR-20a-5p 0 0 1
chr17:4942595|4942941 hsa-miR-20a-3p 0 0 1
chr17:4942595|4942941 hsa-miR-93-5p 0 0 1
chr17:4942595|4942941 hsa-miR-93-3p 0 0 1
chr17:4942595|4942941 hsa-miR-106a-5p 0 0 1
chr17:4942595|4942941 hsa-miR-106a-3p 0 0 1
chr17:4942595|4942941 hsa-miR-15b-5p 0 0 1
chr17:4942595|4942941 hsa-miR-15b-3p 0 0 1
chr17:4942595|4942941 hsa-miR-130a-5p 0 0 1
chr17:4942595|4942941 hsa-miR-130a-3p 0 0 1
chr17:4942595|4942941 hsa-miR-185-5p 0 0 1
chr17:4942595|4942941 hsa-miR-185-3p 0 0 1
chr17:4942595|4942941 hsa-miR-195-5p 0 0 1
chr17:4942595|4942941 hsa-miR-195-3p 0 0 1
chr17:4942595|4942941 hsa-miR-106b-5p 0 0 1
chr17:4942595|4942941 hsa-miR-106b-3p 0 0 1
chr17:4942595|4942941 hsa-miR-301a-5p 0 0 1
chr17:4942595|4942941 hsa-miR-301a-3p 0 0 1
chr17:4942595|4942941 hsa-miR-130b-5p 0 0 1
chr17:4942595|4942941 hsa-miR-130b-3p 0 0 1
chr17:4942595|4942941 hsa-miR-424-5p 0 0 1
chr17:4942595|4942941 hsa-miR-424-3p 0 0 1
chr17:4942595|4942941 hsa-miR-20b-5p 0 0 1
chr17:4942595|4942941 hsa-miR-20b-3p 0 0 1
chr17:4942595|4942941 hsa-miR-497-5p 0 0 1
chr17:4942595|4942941 hsa-miR-497-3p 0 0 1
chr17:4942595|4942941 hsa-miR-519d-5p 0 0 1
chr17:4942595|4942941 hsa-miR-519d-3p 0 0 1
chr17:4942595|4942941 hsa-miR-520g-5p 0 0 1
chr17:4942595|4942941 hsa-miR-520g-3p 0 0 1
chr17:4942595|4942941 hsa-miR-520h 0 0 1
chr17:4942595|4942941 hsa-miR-608 1 0 1
chr17:4942595|4942941 hsa-miR-625-5p 0 0 1
chr17:4942595|4942941 hsa-miR-625-3p 0 0 1
chr17:4942595|4942941 hsa-miR-637 1 0 1
chr17:4942595|4942941 hsa-miR-640 0 0 1
chr17:4942595|4942941 hsa-miR-454-5p 0 0 1
chr17:4942595|4942941 hsa-miR-454-3p 0 0 1
chr17:4942595|4942941 hsa-miR-802 0 1 1
chr17:4942595|4942941 hsa-miR-541-5p 0 0 1
chr17:4942595|4942941 hsa-miR-541-3p 0 0 1
chr17:4942595|4942941 hsa-miR-873-5p 0 0 1
chr17:4942595|4942941 hsa-miR-873-3p 0 0 1
chr17:4942595|4942941 hsa-miR-301b-5p 0 0 1
chr17:4942595|4942941 hsa-miR-301b-3p 0 0 1
chr17:4942595|4942941 hsa-miR-922 0 0 1
chr17:4942595|4942941 hsa-miR-934 0 0 1
chr17:4942595|4942941 hsa-miR-936 0 0 1
chr17:4942595|4942941 hsa-miR-939-5p 0 0 1
chr17:4942595|4942941 hsa-miR-939-3p 0 0 1
chr17:4942595|4942941 hsa-miR-1287-5p 0 0 1
chr17:4942595|4942941 hsa-miR-1287-3p 0 0 1
chr17:4942595|4942941 hsa-miR-1247-5p 0 0 1
chr17:4942595|4942941 hsa-miR-1247-3p 0 0 1
chr17:4942595|4942941 hsa-miR-1257 0 0 1
chr17:4942595|4942941 hsa-miR-1275 0 0 1
chr17:4942595|4942941 hsa-miR-1284 0 1 1
chr17:4942595|4942941 hsa-miR-140-5p 0 0 1
chr17:4942595|4942941 hsa-miR-654-5p 0 0 1
chr17:4942595|4942941 hsa-miR-501-5p 0 0 1
chr17:4942595|4942941 hsa-miR-1207-3p 0 0 1
chr17:4942595|4942941 hsa-miR-338-3p 0 0 1
chr17:4942595|4942941 hsa-miR-199b-3p 0 0 1
chr17:4942595|4942941 hsa-miR-199a-3p 0 0 1
chr17:4942595|4942941 hsa-miR-342-5p 0 0 1
chr17:4942595|4942941 hsa-miR-519b-3p 0 0 1
chr17:4942595|4942941 hsa-miR-519c-3p 0 0 1
chr17:4942595|4942941 hsa-miR-16 0 0 1
chr17:4942595|4942941 hsa-miR-500 0 0 1
chr17:4942595|4942941 hsa-miR-768-3p 0 0 1
chr17:4942595|4942941 hsa-miR-519a 0 0 1
chr17:4942595|4942941 hsa-miR-198 1 0 0
chr17:4942595|4942941 hsa-miR-663a 1 0 0
chr17:4942595|4942941 hsa-miR-762 1 0 0
chr17:4942595|4942941 hsa-miR-665 1 0 0
chr17:4942595|4942941 hsa-miR-711 0 1 0
chr17:4942595|4942941 hsa-miR-3175 1 1 0
chr17:4942595|4942941 hsa-miR-378c 1 0 0
chr17:4942595|4942941 hsa-miR-4281 1 0 0
chr17:4942595|4942941 hsa-miR-3652 1 0 0
chr17:4942595|4942941 hsa-miR-3911 1 0 0
chr17:4942595|4942941 hsa-miR-3916 1 0 0
chr17:4942595|4942941 hsa-miR-3921 1 1 0
chr17:4942595|4942941 hsa-miR-4421 1 0 0
chr17:4942595|4942941 hsa-miR-378g 0 1 0
chr17:4942595|4942941 hsa-miR-4450 1 1 0
chr17:4942595|4942941 hsa-miR-378h 1 0 0
chr17:4942595|4942941 hsa-miR-4489 1 0 0
chr17:4942595|4942941 hsa-miR-4525 1 0 0
chr17:4942595|4942941 hsa-miR-1587 1 0 0
chr17:4942595|4942941 hsa-miR-4539 1 0 0
chr17:4942595|4942941 hsa-miR-4651 1 1 0
chr17:4942595|4942941 hsa-miR-4654 1 0 0
chr17:4942595|4942941 hsa-miR-4656 1 1 0
chr17:4942595|4942941 hsa-miR-4657 1 0 0
chr17:4942595|4942941 hsa-miR-4682 1 0 0
chr17:4942595|4942941 hsa-miR-5698 1 0 0
chr17:4942595|4942941 hsa-miR-5787 1 0 0
chr17:4942595|4942941 hsa-miR-6088 1 0 0
chr17:4942595|4942941 hsa-miR-6126 0 1 0
chr17:4942595|4942941 hsa-miR-6132 1 0 0
chr17:4942595|4942941 hsa-miR-8085 1 1 0
chr17:4942595|4942941 hsa-miR-8089 1 0 0
chr17:4942595|4942941 hsa-miR-12124 0 1 0
chr17:4942595|4942941 hsa-miR-4433b-3p 1 0 0
chr17:4942595|4942941 hsa-miR-92a-2-5p 0 1 0
chr17:4942595|4942941 hsa-miR-6747-5p 1 0 0
chr17:4942595|4942941 hsa-miR-671-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6894-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6728-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6833-5p 0 1 0
chr17:4942595|4942941 hsa-miR-3926 0 1 0
chr17:4942595|4942941 hsa-miR-6089 1 0 0
chr17:4942595|4942941 hsa-miR-6873-5p 0 1 0
chr17:4942595|4942941 hsa-miR-6730-5p 1 0 0
chr17:4942595|4942941 hsa-miR-4753-5p 0 1 0
chr17:4942595|4942941 hsa-miR-6742-5p 1 1 0
chr17:4942595|4942941 hsa-miR-6716-5p 1 0 0
chr17:4942595|4942941 hsa-miR-3180-3p 1 0 0
chr17:4942595|4942941 hsa-miR-23a-5p 1 1 0
chr17:4942595|4942941 hsa-miR-6798-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6881-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6782-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6514-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6821-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6774-3p 0 1 0
chr17:4942595|4942941 hsa-miR-5006-5p 1 1 0
chr17:4942595|4942941 hsa-miR-6786-5p 1 0 0
chr17:4942595|4942941 hsa-miR-7109-5p 1 0 0
chr17:4942595|4942941 hsa-miR-1909-5p 1 0 0
chr17:4942595|4942941 hsa-miR-4786-3p 0 1 0
chr17:4942595|4942941 hsa-miR-1229-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6894-3p 1 0 0
chr17:4942595|4942941 hsa-miR-4640-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6823-5p 0 1 0
chr17:4942595|4942941 hsa-miR-4756-3p 0 1 0
chr17:4942595|4942941 hsa-miR-6847-5p 1 1 0
chr17:4942595|4942941 hsa-miR-6802-5p 1 1 0
chr17:4942595|4942941 hsa-miR-3158-5p 0 1 0
chr17:4942595|4942941 hsa-miR-30a-3p 0 1 0
chr17:4942595|4942941 hsa-miR-664b-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6869-5p 1 0 0
chr17:4942595|4942941 hsa-miR-4742-3p 1 0 0
chr17:4942595|4942941 hsa-miR-4727-3p 1 0 0
chr17:4942595|4942941 hsa-miR-500a-5p 0 1 0
chr17:4942595|4942941 hsa-miR-3664-3p 0 1 0
chr17:4942595|4942941 hsa-miR-1911-5p 0 1 0
chr17:4942595|4942941 hsa-miR-6505-5p 1 0 0
chr17:4942595|4942941 hsa-miR-4520-5p 1 1 0
chr17:4942595|4942941 hsa-miR-4763-3p 1 0 0
chr17:4942595|4942941 hsa-miR-6769b-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6778-5p 0 1 0
chr17:4942595|4942941 hsa-miR-6787-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6812-5p 0 1 0
chr17:4942595|4942941 hsa-miR-6816-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6737-5p 1 1 0
chr17:4942595|4942941 hsa-miR-6752-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6756-5p 1 1 0
chr17:4942595|4942941 hsa-miR-6803-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6819-5p 1 1 0
chr17:4942595|4942941 hsa-miR-10401-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6763-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6797-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6808-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6875-5p 1 0 0
chr17:4942595|4942941 hsa-miR-3620-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6780b-5p 1 0 0
chr17:4942595|4942941 hsa-miR-10396b-5p 1 0 0
chr17:4942595|4942941 hsa-miR-4725-3p 1 0 0
chr17:4942595|4942941 hsa-miR-4726-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6777-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6795-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6887-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6889-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6845-5p 1 1 0
chr17:4942595|4942941 hsa-miR-1238-5p 1 0 0
chr17:4942595|4942941 hsa-miR-4758-5p 1 0 0
chr17:4942595|4942941 hsa-miR-4769-5p 1 0 0
chr17:4942595|4942941 hsa-miR-3940-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6856-5p 1 0 0
chr17:4942595|4942941 hsa-miR-1271-3p 1 0 0
chr17:4942595|4942941 hsa-miR-10398-3p 1 0 0
chr17:4942595|4942941 hsa-miR-3679-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6766-5p 0 1 0
chr17:4942595|4942941 hsa-miR-4667-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6791-5p 1 0 0
chr17:4942595|4942941 hsa-miR-6762-5p 1 1 0
chr17:4942595|4942941 hsa-miR-3928-5p 0 1 0
chr17:4942595|4942941 hsa-miR-6806-3p 1 1 0
chr17:4942595|4942941 hsa-miR-5699-3p 0 1 0
chr17:4942595|4942941 hsa-miR-1912-3p 0 1 0
chr17:4942595|4942941 hsa-miR-30e-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:4942595|4942941
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MGTLASCTLAPPHLKDWLLFLRPSAFPPSLGPTESPAV
Nucleotide Sequence CTGGGAACCCTGGCATCTTGCACTTTGGCCCCACCCCACCTAAAGGATTGGCTTCTTTTCCTGAGGCCTTCAGCCTTCCCACCATCTCTGGGTCCTACTGAAAGCCCAGCTGTATAG

CircID chr17:4942595|4942941
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MQGSRCYSGDSQPSTQILWEPWHLALWPHPT
Nucleotide Sequence CTGCAGGGATCAAGGTGTTACTCTGGGGACTCACAACCTTCTACTCAAATCCTCTGGGAACCCTGGCATCTTGCACTTTGGCCCCACCCCACCTAA

CircID chr17:4942595|4942941
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MKAQLYRFPQPYHYSTPCSEVHWNSHCVLQRHHIQ
Nucleotide Sequence CTGAAAGCCCAGCTGTATAGATTCCCCCAGCCTTACCACTATTCCACACCATGTTCAGAAGTTCATTGGAATTCACATTGTGTACTACAGCGGCACCATATCCAG

CircID chr17:4942595|4942941
ORF Type ORF4
Protein Length 56
Nucleotide Length 171
Protein Sequence MLLDFLCRDQGVTLGTHNLLLKSSGNPGILHFGPTPPKGLASFPEAFSLPTISGSY
Nucleotide Sequence CTGCTGCTGGATTTCCTCTGCAGGGATCAAGGTGTTACTCTGGGGACTCACAACCTTCTACTCAAATCCTCTGGGAACCCTGGCATCTTGCACTTTGGCCCCACCCCACCTAAAGGATTGGCTTCTTTTCCTGAGGCCTTCAGCCTTCCCACCATCTCTGGGTCCTACTGA

CircID chr17:4942595|4942941
ORF Type ORF5
Protein Length 55
Nucleotide Length 168
Protein Sequence MNMVWNSGKAGGIYTAGLSVGPRDGGKAEGLRKRSQSFRWGGAKVQDARVPRGFE
Nucleotide Sequence CTGAACATGGTGTGGAATAGTGGTAAGGCTGGGGGAATCTATACAGCTGGGCTTTCAGTAGGACCCAGAGATGGTGGGAAGGCTGAAGGCCTCAGGAAAAGAAGCCAATCCTTTAGGTGGGGTGGGGCCAAAGTGCAAGATGCCAGGGTTCCCAGAGGATTTGAGTAG

CircID chr17:4942595|4942941
ORF Type ORF6
Protein Length 34
Nucleotide Length 102
Protein Sequence MIPAEEIQQQIWIPSVFIGERSSEYLRALFVYEK
Nucleotide Sequence TTGATCCCTGCAGAGGAAATCCAGCAGCAGATCTGGATCCCGTCTGTATTTATTGGGGAGAGAAGCTCCGAGTACCTGCGTGCCCTCTTTGTCTACGAGAAG

CircID chr17:4942595|4942941
ORF Type ORF7
Protein Length 35
Nucleotide Length 108
Protein Sequence MVGRLKASGKEANPLGGVGPKCKMPGFPEDLSRRL
Nucleotide Sequence ATGGTGGGAAGGCTGAAGGCCTCAGGAAAAGAAGCCAATCCTTTAGGTGGGGTGGGGCCAAAGTGCAAGATGCCAGGGTTCCCAGAGGATTTGAGTAGAAGGTTGTGA

CircID chr17:4942595|4942941
ORF Type ORF8
Protein Length 32
Nucleotide Length 96
Protein Sequence MQRKSSSRSGSRLYLLGREAPSTCVPSLSTRR
Nucleotide Sequence CTGCAGAGGAAATCCAGCAGCAGATCTGGATCCCGTCTGTATTTATTGGGGAGAGAAGCTCCGAGTACCTGCGTGCCCTCTTTGTCTACGAGAAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites