CircRNA Information

General Information
circRNA Basic Information
CircID chr17:4945743|4945898
Strand +
CircType exon
Host Gene ENSG00000108518.7;
Algorism CIRI2;
Sequence CTCGTCTGTCCCTTCCCCTTCACCGCTCCCCACAGCTTTGCACCCCTTTCCTCCCCATACACACACAAACCATTTTATTTTTTGGGCCATTACCCCATACCCCTTATTGCTGCCAAAACCACATGGGCTGGGGGCCAGGGCTGGATGGACAGACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:4945743|4945898 hsa-miR-19a-5p 0 0 1
chr17:4945743|4945898 hsa-miR-19a-3p 0 0 1
chr17:4945743|4945898 hsa-miR-96-5p 0 0 1
chr17:4945743|4945898 hsa-miR-96-3p 0 0 1
chr17:4945743|4945898 hsa-miR-182-5p 0 0 1
chr17:4945743|4945898 hsa-miR-182-3p 0 0 1
chr17:4945743|4945898 hsa-miR-320a-5p 0 0 1
chr17:4945743|4945898 hsa-miR-320a-3p 0 0 1
chr17:4945743|4945898 hsa-miR-522-5p 0 0 1
chr17:4945743|4945898 hsa-miR-522-3p 0 0 1
chr17:4945743|4945898 hsa-miR-527 0 0 1
chr17:4945743|4945898 hsa-miR-599 0 0 1
chr17:4945743|4945898 hsa-miR-1271-5p 0 0 1
chr17:4945743|4945898 hsa-miR-1271-3p 0 0 1
chr17:4945743|4945898 hsa-miR-939-5p 0 0 1
chr17:4945743|4945898 hsa-miR-939-3p 0 0 1
chr17:4945743|4945898 hsa-miR-491-5p 0 0 1
chr17:4945743|4945898 hsa-miR-885-3p 1 0 1
chr17:4945743|4945898 hsa-miR-361-3p 0 1 1
chr17:4945743|4945898 hsa-miR-342-5p 1 1 1
chr17:4945743|4945898 hsa-miR-320b 0 1 1
chr17:4945743|4945898 hsa-miR-320c 0 1 1
chr17:4945743|4945898 hsa-miR-320d 0 1 1
chr17:4945743|4945898 hsa-miR-518a-5p 0 0 1
chr17:4945743|4945898 hsa-miR-19b 0 0 1
chr17:4945743|4945898 hsa-miR-147 0 0 1
chr17:4945743|4945898 hsa-miR-608 1 0 0
chr17:4945743|4945898 hsa-miR-765 1 0 0
chr17:4945743|4945898 hsa-miR-1268a 1 0 0
chr17:4945743|4945898 hsa-miR-3154 1 0 0
chr17:4945743|4945898 hsa-miR-3196 1 0 0
chr17:4945743|4945898 hsa-miR-4322 1 0 0
chr17:4945743|4945898 hsa-miR-4271 1 0 0
chr17:4945743|4945898 hsa-miR-3911 1 0 0
chr17:4945743|4945898 hsa-miR-3936 1 1 0
chr17:4945743|4945898 hsa-miR-1268b 1 0 0
chr17:4945743|4945898 hsa-miR-4429 0 1 0
chr17:4945743|4945898 hsa-miR-2392 1 0 0
chr17:4945743|4945898 hsa-miR-4516 1 0 0
chr17:4945743|4945898 hsa-miR-4647 1 0 0
chr17:4945743|4945898 hsa-miR-4651 1 0 0
chr17:4945743|4945898 hsa-miR-4658 1 0 0
chr17:4945743|4945898 hsa-miR-4689 1 0 0
chr17:4945743|4945898 hsa-miR-4706 1 0 0
chr17:4945743|4945898 hsa-miR-4739 1 0 0
chr17:4945743|4945898 hsa-miR-5194 1 0 0
chr17:4945743|4945898 hsa-miR-5787 1 0 0
chr17:4945743|4945898 hsa-miR-6075 1 0 0
chr17:4945743|4945898 hsa-miR-6081 1 0 0
chr17:4945743|4945898 hsa-miR-6085 1 0 0
chr17:4945743|4945898 hsa-miR-6090 1 1 0
chr17:4945743|4945898 hsa-miR-6124 1 0 0
chr17:4945743|4945898 hsa-miR-7515 0 1 0
chr17:4945743|4945898 hsa-miR-8085 1 0 0
chr17:4945743|4945898 hsa-miR-12114 1 0 0
chr17:4945743|4945898 hsa-miR-4433b-3p 1 0 0
chr17:4945743|4945898 hsa-miR-6734-5p 1 0 0
chr17:4945743|4945898 hsa-miR-504-3p 1 0 0
chr17:4945743|4945898 hsa-miR-6747-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6765-5p 1 0 0
chr17:4945743|4945898 hsa-miR-3150a-3p 1 0 0
chr17:4945743|4945898 hsa-miR-7106-5p 1 1 0
chr17:4945743|4945898 hsa-miR-6825-5p 1 1 0
chr17:4945743|4945898 hsa-miR-6894-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6857-5p 1 0 0
chr17:4945743|4945898 hsa-miR-4687-3p 1 0 0
chr17:4945743|4945898 hsa-miR-6720-5p 1 1 0
chr17:4945743|4945898 hsa-miR-1233-3p 0 1 0
chr17:4945743|4945898 hsa-miR-6799-5p 1 0 0
chr17:4945743|4945898 hsa-miR-766-5p 1 1 0
chr17:4945743|4945898 hsa-miR-6515-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6880-5p 1 1 0
chr17:4945743|4945898 hsa-miR-7847-3p 1 0 0
chr17:4945743|4945898 hsa-miR-6867-5p 1 1 0
chr17:4945743|4945898 hsa-miR-7154-3p 1 0 0
chr17:4945743|4945898 hsa-miR-6890-5p 1 1 0
chr17:4945743|4945898 hsa-miR-6759-5p 1 0 0
chr17:4945743|4945898 hsa-miR-8069 1 0 0
chr17:4945743|4945898 hsa-miR-874-3p 1 0 0
chr17:4945743|4945898 hsa-miR-7845-5p 0 1 0
chr17:4945743|4945898 hsa-miR-6742-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6716-5p 1 0 0
chr17:4945743|4945898 hsa-miR-3151-5p 1 0 0
chr17:4945743|4945898 hsa-miR-1292-5p 1 0 0
chr17:4945743|4945898 hsa-miR-3180-3p 1 0 0
chr17:4945743|4945898 hsa-miR-6748-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6772-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6796-5p 1 1 0
chr17:4945743|4945898 hsa-miR-6732-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6805-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6827-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6881-5p 0 1 0
chr17:4945743|4945898 hsa-miR-6782-5p 1 1 0
chr17:4945743|4945898 hsa-miR-6810-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6786-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6835-5p 1 0 0
chr17:4945743|4945898 hsa-miR-7109-5p 1 0 0
chr17:4945743|4945898 hsa-miR-1229-5p 1 0 0
chr17:4945743|4945898 hsa-miR-1228-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6771-5p 1 0 0
chr17:4945743|4945898 hsa-miR-3202 0 1 0
chr17:4945743|4945898 hsa-miR-149-3p 1 1 0
chr17:4945743|4945898 hsa-miR-6864-5p 1 1 0
chr17:4945743|4945898 hsa-miR-574-5p 1 0 0
chr17:4945743|4945898 hsa-miR-3678-3p 1 0 0
chr17:4945743|4945898 hsa-miR-1910-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6779-3p 0 1 0
chr17:4945743|4945898 hsa-miR-1207-5p 1 0 0
chr17:4945743|4945898 hsa-miR-1233-5p 1 0 0
chr17:4945743|4945898 hsa-miR-4763-3p 1 0 0
chr17:4945743|4945898 hsa-miR-6778-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6812-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6870-5p 1 0 0
chr17:4945743|4945898 hsa-miR-1343-5p 1 1 0
chr17:4945743|4945898 hsa-miR-6737-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6752-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6756-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6803-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6819-5p 1 1 0
chr17:4945743|4945898 hsa-miR-7110-5p 1 0 0
chr17:4945743|4945898 hsa-miR-10401-5p 1 0 0
chr17:4945743|4945898 hsa-miR-1249-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6722-3p 1 0 0
chr17:4945743|4945898 hsa-miR-6751-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6763-5p 1 1 0
chr17:4945743|4945898 hsa-miR-6779-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6780a-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6797-5p 1 1 0
chr17:4945743|4945898 hsa-miR-6879-5p 1 0 0
chr17:4945743|4945898 hsa-miR-7111-5p 1 1 0
chr17:4945743|4945898 hsa-miR-4728-5p 1 1 0
chr17:4945743|4945898 hsa-miR-5196-5p 1 1 0
chr17:4945743|4945898 hsa-miR-6780b-5p 1 1 0
chr17:4945743|4945898 hsa-miR-10526-3p 1 1 0
chr17:4945743|4945898 hsa-miR-1237-5p 1 0 0
chr17:4945743|4945898 hsa-miR-328-5p 1 0 0
chr17:4945743|4945898 hsa-miR-4725-3p 0 1 0
chr17:4945743|4945898 hsa-miR-4745-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6738-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6795-5p 1 1 0
chr17:4945743|4945898 hsa-miR-6846-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6848-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6858-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6883-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6887-5p 1 0 0
chr17:4945743|4945898 hsa-miR-4723-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6885-5p 1 0 0
chr17:4945743|4945898 hsa-miR-4758-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6758-5p 1 0 0
chr17:4945743|4945898 hsa-miR-1914-3p 1 0 0
chr17:4945743|4945898 hsa-miR-4665-5p 1 0 0
chr17:4945743|4945898 hsa-miR-4472 1 0 0
chr17:4945743|4945898 hsa-miR-6785-5p 1 0 0
chr17:4945743|4945898 hsa-miR-4667-5p 1 1 0
chr17:4945743|4945898 hsa-miR-6790-5p 1 0 0
chr17:4945743|4945898 hsa-miR-6753-3p 1 1 0
chr17:4945743|4945898 hsa-miR-6775-3p 0 1 0
chr17:4945743|4945898 hsa-miR-6512-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:4945743|4945898
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MGHYPIPLIAAKTTWAGGQGWMDRH
Nucleotide Sequence TTGGGCCATTACCCCATACCCCTTATTGCTGCCAAAACCACATGGGCTGGGGGCCAGGGCTGGATGGACAGACAC
CircID chr17:4945743|4945898
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MHPFPPHTHTNHFIFWAITPYPLLLPKPHGLGARAGWTD
Nucleotide Sequence TTGCACCCCTTTCCTCCCCATACACACACAAACCATTTTATTTTTTGGGCCATTACCCCATACCCCTTATTGCTGCCAAAACCACATGGGCTGGGGGCCAGGGCTGGATGGACAGAC
CircID chr17:4945743|4945898
ORF Type ORF3
Protein Length 50
Nucleotide Length 150
Protein Sequence MSLPLHRSPQLCTPFLPIHTQTILFFGPLPHTPYCCQNHMGWGPGLDGQT
Nucleotide Sequence CTGTCCCTTCCCCTTCACCGCTCCCCACAGCTTTGCACCCCTTTCCTCCCCATACACACACAAACCATTTTATTTTTTGGGCCATTACCCCATACCCCTTATTGCTGCCAAAACCACATGGGCTGGGGGCCAGGGCTGGATGGACAGACA
CircID chr17:4945743|4945898
ORF Type ORF4
Protein Length 46
Nucleotide Length 138
Protein Sequence MAPSPCGFGSNKGYGVMAQKIKWFVCVWGGKGCKAVGSGEGEGTDE
Nucleotide Sequence CTGGCCCCCAGCCCATGTGGTTTTGGCAGCAATAAGGGGTATGGGGTAATGGCCCAAAAAATAAAATGGTTTGTGTGTGTATGGGGAGGAAAGGGGTGCAAAGCTGTGGGGAGCGGTGAAGGGGAAGGGACAGACGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab