CircRNA Information

General Information
circRNA Basic Information
CircID chr17:4955204|4955584
Strand -
CircType exon
Host Gene ENSG00000108515.16;
Algorism CIRI2;
Sequence CTCAAGGGGGTCATCAAGGCCAAGTATGGGAAGGATGCCACCAATGTGGGTGATGAAGGTGGCTTCGCACCCAACATCCTGGAGAACAATGAGGGTCAGTGCTGAGCACCCTGGGGGGCAGACCCCCTGGATCTCCACATGGGCAGGGGAGGCTGCAGACAAGGGGCACTGGAGTCTCAGGTCCTTTCTTGGTCCTCCCCCAGCCCTGGAGCTGCTGAAGACGGCCATCCAGGCGGCTGGTTACCCAGACAAGGTGGTGATCGGCATGGATGTGGCAGCATCTGAGTTCTATCGCAATGGGAAGTACGATCTTGACTTCAAGTCGCCTGATGATCCCGCACGGCACATCACTGGGGAGAAGCTCGGAGAGCTGTATAAGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:4955204|4955584 hsa-miR-197-5p 0 0 1
chr17:4955204|4955584 hsa-miR-197-3p 0 0 1
chr17:4955204|4955584 hsa-miR-205-5p 0 0 1
chr17:4955204|4955584 hsa-miR-205-3p 0 0 1
chr17:4955204|4955584 hsa-miR-214-5p 0 0 1
chr17:4955204|4955584 hsa-miR-214-3p 0 0 1
chr17:4955204|4955584 hsa-miR-346 0 1 1
chr17:4955204|4955584 hsa-miR-492 0 0 1
chr17:4955204|4955584 hsa-miR-504-5p 0 0 1
chr17:4955204|4955584 hsa-miR-504-3p 0 0 1
chr17:4955204|4955584 hsa-miR-487b-5p 0 0 1
chr17:4955204|4955584 hsa-miR-487b-3p 0 0 1
chr17:4955204|4955584 hsa-miR-555 0 0 1
chr17:4955204|4955584 hsa-miR-573 0 0 1
chr17:4955204|4955584 hsa-miR-620 0 0 1
chr17:4955204|4955584 hsa-miR-625-5p 0 0 1
chr17:4955204|4955584 hsa-miR-625-3p 0 0 1
chr17:4955204|4955584 hsa-miR-632 0 1 1
chr17:4955204|4955584 hsa-miR-637 0 0 1
chr17:4955204|4955584 hsa-miR-646 0 0 1
chr17:4955204|4955584 hsa-miR-766-5p 0 0 1
chr17:4955204|4955584 hsa-miR-766-3p 0 0 1
chr17:4955204|4955584 hsa-miR-890 0 0 1
chr17:4955204|4955584 hsa-miR-665 0 0 1
chr17:4955204|4955584 hsa-miR-922 0 0 1
chr17:4955204|4955584 hsa-miR-1231 1 1 1
chr17:4955204|4955584 hsa-miR-1205 0 0 1
chr17:4955204|4955584 hsa-miR-1262 0 0 1
chr17:4955204|4955584 hsa-miR-1265 0 0 1
chr17:4955204|4955584 hsa-miR-1270 0 0 1
chr17:4955204|4955584 hsa-miR-1275 0 0 1
chr17:4955204|4955584 hsa-miR-1825 0 1 1
chr17:4955204|4955584 hsa-miR-615-3p 0 0 1
chr17:4955204|4955584 hsa-miR-199a-5p 0 0 1
chr17:4955204|4955584 hsa-miR-1184 0 0 1
chr17:4955204|4955584 hsa-miR-508-5p 0 0 1
chr17:4955204|4955584 hsa-miR-361-3p 0 1 1
chr17:4955204|4955584 hsa-miR-331-3p 0 0 1
chr17:4955204|4955584 hsa-miR-455-5p 0 0 1
chr17:4955204|4955584 hsa-miR-199b-5p 0 0 1
chr17:4955204|4955584 hsa-miR-324-3p 0 0 1
chr17:4955204|4955584 hsa-miR-515-5p 0 0 1
chr17:4955204|4955584 hsa-miR-220b 0 0 1
chr17:4955204|4955584 hsa-miR-1254 0 0 1
chr17:4955204|4955584 hsa-miR-762 0 1 0
chr17:4955204|4955584 hsa-miR-1913 0 1 0
chr17:4955204|4955584 hsa-miR-3131 0 1 0
chr17:4955204|4955584 hsa-miR-4324 0 1 0
chr17:4955204|4955584 hsa-miR-4278 0 1 0
chr17:4955204|4955584 hsa-miR-4329 0 1 0
chr17:4955204|4955584 hsa-miR-3907 1 1 0
chr17:4955204|4955584 hsa-miR-4498 0 1 0
chr17:4955204|4955584 hsa-miR-4505 0 1 0
chr17:4955204|4955584 hsa-miR-3972 1 0 0
chr17:4955204|4955584 hsa-miR-4635 0 1 0
chr17:4955204|4955584 hsa-miR-4642 1 1 0
chr17:4955204|4955584 hsa-miR-4683 0 1 0
chr17:4955204|4955584 hsa-miR-103a-2-5p 0 1 0
chr17:4955204|4955584 hsa-miR-432-3p 0 1 0
chr17:4955204|4955584 hsa-miR-3189-5p 1 0 0
chr17:4955204|4955584 hsa-let-7e-3p 1 1 0
chr17:4955204|4955584 hsa-miR-6787-3p 1 0 0
chr17:4955204|4955584 hsa-miR-4725-5p 1 0 0
chr17:4955204|4955584 hsa-miR-3194-5p 0 1 0
chr17:4955204|4955584 hsa-miR-7109-3p 0 1 0
chr17:4955204|4955584 hsa-miR-4786-3p 0 1 0
chr17:4955204|4955584 hsa-miR-296-3p 0 1 0
chr17:4955204|4955584 hsa-miR-3925-3p 0 1 0
chr17:4955204|4955584 hsa-miR-6825-3p 1 0 0
chr17:4955204|4955584 hsa-miR-383-3p 0 1 0
chr17:4955204|4955584 hsa-miR-6746-3p 0 1 0
chr17:4955204|4955584 hsa-miR-6773-3p 0 1 0
chr17:4955204|4955584 hsa-miR-6816-3p 0 1 0
chr17:4955204|4955584 hsa-miR-6734-3p 0 1 0
chr17:4955204|4955584 hsa-miR-6780b-3p 0 1 0
chr17:4955204|4955584 hsa-let-7a-2-3p 1 1 0
chr17:4955204|4955584 hsa-miR-7111-5p 0 1 0
chr17:4955204|4955584 hsa-miR-1915-3p 0 1 0
chr17:4955204|4955584 hsa-miR-4685-5p 1 1 0
chr17:4955204|4955584 hsa-miR-6887-5p 0 1 0
chr17:4955204|4955584 hsa-miR-4723-5p 0 1 0
chr17:4955204|4955584 hsa-miR-769-3p 0 1 0
chr17:4955204|4955584 hsa-miR-193b-3p 1 1 0
chr17:4955204|4955584 hsa-miR-4723-3p 1 0 0
chr17:4955204|4955584 hsa-miR-6751-3p 1 0 0
chr17:4955204|4955584 hsa-miR-6781-3p 0 1 0
chr17:4955204|4955584 hsa-miR-6764-5p 0 1 0
chr17:4955204|4955584 hsa-miR-103a-1-5p 0 1 0
chr17:4955204|4955584 hsa-miR-3622b-3p 1 1 0
chr17:4955204|4955584 hsa-miR-6864-3p 0 1 0
chr17:4955204|4955584 hsa-miR-3117-3p 0 1 0
chr17:4955204|4955584 hsa-let-7f-2-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:4955204|4955584
ORF Type ORF1
Protein Length 52
Nucleotide Length 159
Protein Sequence MDLHMGRGGCRQGALESQVLSWSSPSPGAAEDGHPGGWLPRQGGDRHGCGSI
Nucleotide Sequence CTGGATCTCCACATGGGCAGGGGAGGCTGCAGACAAGGGGCACTGGAGTCTCAGGTCCTTTCTTGGTCCTCCCCCAGCCCTGGAGCTGCTGAAGACGGCCATCCAGGCGGCTGGTTACCCAGACAAGGTGGTGATCGGCATGGATGTGGCAGCATCTGA

CircID chr17:4955204|4955584
ORF Type ORF2
Protein Length 118
Nucleotide Length 354
Protein Sequence MGRMPPMWVMKVASHPTSWRTMRVSAEHPGGQTPWISTWAGEAADKGHWSLRSFLGPPPALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPARHITGEKLGELYK
Nucleotide Sequence ATGGGAAGGATGCCACCAATGTGGGTGATGAAGGTGGCTTCGCACCCAACATCCTGGAGAACAATGAGGGTCAGTGCTGAGCACCCTGGGGGGCAGACCCCCTGGATCTCCACATGGGCAGGGGAGGCTGCAGACAAGGGGCACTGGAGTCTCAGGTCCTTTCTTGGTCCTCCCCCAGCCCTGGAGCTGCTGAAGACGGCCATCCAGGCGGCTGGTTACCCAGACAAGGTGGTGATCGGCATGGATGTGGCAGCATCTGAGTTCTATCGCAATGGGAAGTACGATCTTGACTTCAAGTCGCCTGATGATCCCGCACGGCACATCACTGGGGAGAAGCTCGGAGAGCTGTATAAG

CircID chr17:4955204|4955584
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MSTLGGRPPGSPHGQGRLQTRGTGVSGPFLVLPQPWSC
Nucleotide Sequence CTGAGCACCCTGGGGGGCAGACCCCCTGGATCTCCACATGGGCAGGGGAGGCTGCAGACAAGGGGCACTGGAGTCTCAGGTCCTTTCTTGGTCCTCCCCCAGCCCTGGAGCTGCTGA

CircID chr17:4955204|4955584
ORF Type ORF4
Protein Length 37
Nucleotide Length 111
Protein Sequence MWQHLSSIAMGSTILTSSRLMIPHGTSLGRSSESCIR
Nucleotide Sequence ATGTGGCAGCATCTGAGTTCTATCGCAATGGGAAGTACGATCTTGACTTCAAGTCGCCTGATGATCCCGCACGGCACATCACTGGGGAGAAGCTCGGAGAGCTGTATAAGA

CircID chr17:4955204|4955584
ORF Type ORF5
Protein Length 76
Nucleotide Length 228
Protein Sequence MAVFSSSRAGGGPRKDLRLQCPLSAASPAHVEIQGVCPPGCSALTLIVLQDVGCEATFITHIGGILPILGLDDPLE
Nucleotide Sequence ATGGCCGTCTTCAGCAGCTCCAGGGCTGGGGGAGGACCAAGAAAGGACCTGAGACTCCAGTGCCCCTTGTCTGCAGCCTCCCCTGCCCATGTGGAGATCCAGGGGGTCTGCCCCCCAGGGTGCTCAGCACTGACCCTCATTGTTCTCCAGGATGTTGGGTGCGAAGCCACCTTCATCACCCACATTGGTGGCATCCTTCCCATACTTGGCCTTGATGACCCCCTTGAG

CircID chr17:4955204|4955584
ORF Type ORF6
Protein Length 34
Nucleotide Length 105
Protein Sequence MLPHPCRSPPCLGNQPPGWPSSAAPGLGEDQERT
Nucleotide Sequence ATGCTGCCACATCCATGCCGATCACCACCTTGTCTGGGTAACCAGCCGCCTGGATGGCCGTCTTCAGCAGCTCCAGGGCTGGGGGAGGACCAAGAAAGGACCTGA

CircID chr17:4955204|4955584
ORF Type ORF7
Protein Length 29
Nucleotide Length 87
Protein Sequence MFSRMLGAKPPSSPTLVASFPYLALMTPL
Nucleotide Sequence TTGTTCTCCAGGATGTTGGGTGCGAAGCCACCTTCATCACCCACATTGGTGGCATCCTTCCCATACTTGGCCTTGATGACCCCCTTG

CircID chr17:4955204|4955584
ORF Type ORF8
Protein Length 72
Nucleotide Length 219
Protein Sequence MDGRLQQLQGWGRTKKGPETPVPLVCSLPCPCGDPGGLPPRVLSTDPHCSPGCWVRSHLHHPHWWHPSHTWP
Nucleotide Sequence CTGGATGGCCGTCTTCAGCAGCTCCAGGGCTGGGGGAGGACCAAGAAAGGACCTGAGACTCCAGTGCCCCTTGTCTGCAGCCTCCCCTGCCCATGTGGAGATCCAGGGGGTCTGCCCCCCAGGGTGCTCAGCACTGACCCTCATTGTTCTCCAGGATGTTGGGTGCGAAGCCACCTTCATCACCCACATTGGTGGCATCCTTCCCATACTTGGCCTTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites