CircRNA Information

General Information
circRNA Basic Information
CircID chr17:50090091|50090249
Strand -
CircType exon
Host Gene ENSG00000005884.16;
Algorism CIRI2;
Sequence CAGCCAGCCTCAGAAGGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAGCGACACTTGAATGTAGAATAGGCAGGGGGCCCTGCCCCACCCCATCCAGCCAGACCCCACGCTGACCATGCGTCAGGGGCCTAGAGGTGGAGTTCTTAGCTATCCTTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:50090091|50090249 hsa-miR-26b-5p 0 0 1
chr17:50090091|50090249 hsa-miR-26b-3p 0 0 1
chr17:50090091|50090249 hsa-miR-181c-5p 0 0 1
chr17:50090091|50090249 hsa-miR-181c-3p 0 0 1
chr17:50090091|50090249 hsa-miR-149-5p 0 0 1
chr17:50090091|50090249 hsa-miR-149-3p 0 0 1
chr17:50090091|50090249 hsa-miR-326 0 1 1
chr17:50090091|50090249 hsa-miR-431-5p 0 0 1
chr17:50090091|50090249 hsa-miR-431-3p 0 0 1
chr17:50090091|50090249 hsa-miR-181d-5p 0 0 1
chr17:50090091|50090249 hsa-miR-181d-3p 0 0 1
chr17:50090091|50090249 hsa-miR-608 1 1 1
chr17:50090091|50090249 hsa-miR-637 1 0 1
chr17:50090091|50090249 hsa-miR-645 0 0 1
chr17:50090091|50090249 hsa-miR-1182 0 1 1
chr17:50090091|50090249 hsa-miR-1237-5p 0 0 1
chr17:50090091|50090249 hsa-miR-1237-3p 0 0 1
chr17:50090091|50090249 hsa-miR-1287-5p 0 0 1
chr17:50090091|50090249 hsa-miR-1287-3p 0 0 1
chr17:50090091|50090249 hsa-miR-1297 0 0 1
chr17:50090091|50090249 hsa-miR-296-5p 0 1 1
chr17:50090091|50090249 hsa-miR-486-3p 0 0 1
chr17:50090091|50090249 hsa-miR-615-5p 0 0 1
chr17:50090091|50090249 hsa-miR-485-5p 0 1 1
chr17:50090091|50090249 hsa-miR-1207-5p 0 0 1
chr17:50090091|50090249 hsa-miR-342-5p 0 0 1
chr17:50090091|50090249 hsa-miR-330-5p 1 1 1
chr17:50090091|50090249 hsa-miR-548b-3p 0 0 1
chr17:50090091|50090249 hsa-miR-181a 0 0 1
chr17:50090091|50090249 hsa-miR-181b 0 0 1
chr17:50090091|50090249 hsa-miR-26a 0 0 1
chr17:50090091|50090249 hsa-miR-762 1 0 0
chr17:50090091|50090249 hsa-miR-940 1 1 0
chr17:50090091|50090249 hsa-miR-1205 1 0 0
chr17:50090091|50090249 hsa-miR-1469 1 0 0
chr17:50090091|50090249 hsa-miR-2861 1 0 0
chr17:50090091|50090249 hsa-miR-4265 1 0 0
chr17:50090091|50090249 hsa-miR-3652 0 1 0
chr17:50090091|50090249 hsa-miR-4448 1 0 0
chr17:50090091|50090249 hsa-miR-4469 1 1 0
chr17:50090091|50090249 hsa-miR-1587 1 0 0
chr17:50090091|50090249 hsa-miR-4651 0 1 0
chr17:50090091|50090249 hsa-miR-5787 1 0 0
chr17:50090091|50090249 hsa-miR-6132 1 0 0
chr17:50090091|50090249 hsa-miR-8089 1 0 0
chr17:50090091|50090249 hsa-miR-92a-2-5p 0 1 0
chr17:50090091|50090249 hsa-miR-7155-5p 1 0 0
chr17:50090091|50090249 hsa-miR-6747-3p 0 1 0
chr17:50090091|50090249 hsa-miR-1227-5p 1 0 0
chr17:50090091|50090249 hsa-miR-3064-5p 1 1 0
chr17:50090091|50090249 hsa-miR-6890-5p 0 1 0
chr17:50090091|50090249 hsa-miR-6721-5p 0 1 0
chr17:50090091|50090249 hsa-miR-6873-3p 0 1 0
chr17:50090091|50090249 hsa-miR-6742-5p 1 1 0
chr17:50090091|50090249 hsa-miR-3151-5p 0 1 0
chr17:50090091|50090249 hsa-miR-3180-3p 1 0 0
chr17:50090091|50090249 hsa-miR-6793-5p 1 0 0
chr17:50090091|50090249 hsa-miR-6782-5p 1 0 0
chr17:50090091|50090249 hsa-miR-6821-5p 1 0 0
chr17:50090091|50090249 hsa-miR-345-3p 1 0 0
chr17:50090091|50090249 hsa-miR-6514-3p 1 0 0
chr17:50090091|50090249 hsa-miR-7113-3p 1 0 0
chr17:50090091|50090249 hsa-miR-4743-5p 1 0 0
chr17:50090091|50090249 hsa-miR-193a-5p 1 0 0
chr17:50090091|50090249 hsa-miR-593-3p 1 0 0
chr17:50090091|50090249 hsa-miR-2276-5p 1 1 0
chr17:50090091|50090249 hsa-miR-6513-3p 0 1 0
chr17:50090091|50090249 hsa-miR-181a-5p 0 1 0
chr17:50090091|50090249 hsa-miR-4763-3p 0 1 0
chr17:50090091|50090249 hsa-miR-6812-5p 1 1 0
chr17:50090091|50090249 hsa-miR-6816-5p 1 1 0
chr17:50090091|50090249 hsa-miR-5001-5p 1 0 0
chr17:50090091|50090249 hsa-miR-6737-5p 0 1 0
chr17:50090091|50090249 hsa-miR-6743-5p 1 0 0
chr17:50090091|50090249 hsa-miR-6756-5p 1 1 0
chr17:50090091|50090249 hsa-miR-6819-5p 0 1 0
chr17:50090091|50090249 hsa-miR-6722-3p 1 0 0
chr17:50090091|50090249 hsa-miR-3620-5p 1 0 0
chr17:50090091|50090249 hsa-miR-6836-5p 1 1 0
chr17:50090091|50090249 hsa-miR-6846-5p 1 0 0
chr17:50090091|50090249 hsa-miR-6848-5p 1 0 0
chr17:50090091|50090249 hsa-miR-365a-5p 1 0 0
chr17:50090091|50090249 hsa-miR-365b-5p 1 0 0
chr17:50090091|50090249 hsa-miR-6511b-5p 1 0 0
chr17:50090091|50090249 hsa-miR-3940-5p 1 0 0
chr17:50090091|50090249 hsa-miR-5008-3p 1 0 0
chr17:50090091|50090249 hsa-miR-6855-5p 1 0 0
chr17:50090091|50090249 hsa-miR-6766-5p 0 1 0
chr17:50090091|50090249 hsa-miR-6724-5p 1 0 0
chr17:50090091|50090249 hsa-miR-6791-5p 1 0 0
chr17:50090091|50090249 hsa-miR-6753-3p 1 0 0
chr17:50090091|50090249 hsa-miR-6829-3p 1 0 0
chr17:50090091|50090249 hsa-miR-3085-3p 1 0 0
chr17:50090091|50090249 hsa-miR-3121-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:50090091|50090249
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MPHPIQPDPTLTMRQGPRGGVLSYPW
Nucleotide Sequence CTGCCCCACCCCATCCAGCCAGACCCCACGCTGACCATGCGTCAGGGGCCTAGAGGTGGAGTTCTTAGCTATCCTTGG
CircID chr17:50090091|50090249
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MTHGQRGVWLDGVGQGPLPILHSSVAPSVVLQGLSGAF
Nucleotide Sequence CTGACGCATGGTCAGCGTGGGGTCTGGCTGGATGGGGTGGGGCAGGGCCCCCTGCCTATTCTACATTCAAGTGTCGCTCCCTCCGTGGTCTTGCAGGGTCTCTCTGGGGCCTTCTGA
CircID chr17:50090091|50090249
ORF Type ORF3
Protein Length 39
Nucleotide Length 117
Protein Sequence MVSVGSGWMGWGRAPCLFYIQVSLPPWSCRVSLGPSEAG
Nucleotide Sequence ATGGTCAGCGTGGGGTCTGGCTGGATGGGGTGGGGCAGGGCCCCCTGCCTATTCTACATTCAAGTGTCGCTCCCTCCGTGGTCTTGCAGGGTCTCTCTGGGGCCTTCTGAGGCTGGC
CircID chr17:50090091|50090249
ORF Type ORF4
Protein Length 34
Nucleotide Length 102
Protein Sequence MAGWGGAGPPAYSTFKCRSLRGLAGSLWGLLRLA
Nucleotide Sequence CTGGCTGGATGGGGTGGGGCAGGGCCCCCTGCCTATTCTACATTCAAGTGTCGCTCCCTCCGTGGTCTTGCAGGGTCTCTCTGGGGCCTTCTGAGGCTGGCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab