CircRNA Information

General Information
circRNA Basic Information
CircID chr17:50136162|50139491
Strand -
CircType exon
Host Gene ENSG00000108819.10;
Algorism CIRI2;
Sequence CCGCCAGCGCCCCTTCTCCTGCTCCAGGCTCTGCAGCTTTCTTTTCAGCTGCTGGATCTCTGCCTCAGTGACCGCATGCTTGATCTGGAGCTGTTGGGCAGAGGGGCAGGCACTCAGCTCCAGCAGGGTGGGGCAGGCAGTGCCAAGGGCAGGAGACCTGCCTGCCTTTCCCTCCACCACTCCAGGGAGCCCCTCCTCCCACCTCCTTGAACTTGTGCACCAGCTTCTCGGGCTCCATGTCCACAGGGGACAGTGCATCCTCGTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:50136162|50139491 hsa-miR-96-5p 0 0 1
chr17:50136162|50139491 hsa-miR-96-3p 0 0 1
chr17:50136162|50139491 hsa-miR-122-5p 0 0 1
chr17:50136162|50139491 hsa-miR-122-3p 0 0 1
chr17:50136162|50139491 hsa-miR-320a-5p 0 0 1
chr17:50136162|50139491 hsa-miR-320a-3p 0 0 1
chr17:50136162|50139491 hsa-miR-370-5p 0 0 1
chr17:50136162|50139491 hsa-miR-370-3p 0 0 1
chr17:50136162|50139491 hsa-miR-519e-5p 0 0 1
chr17:50136162|50139491 hsa-miR-519e-3p 0 0 1
chr17:50136162|50139491 hsa-miR-646 0 0 1
chr17:50136162|50139491 hsa-miR-1271-5p 0 0 1
chr17:50136162|50139491 hsa-miR-1271-3p 0 0 1
chr17:50136162|50139491 hsa-miR-765 1 0 1
chr17:50136162|50139491 hsa-miR-938 0 0 1
chr17:50136162|50139491 hsa-miR-940 0 1 1
chr17:50136162|50139491 hsa-miR-1287-5p 0 0 1
chr17:50136162|50139491 hsa-miR-1287-3p 0 0 1
chr17:50136162|50139491 hsa-miR-1827 0 1 1
chr17:50136162|50139491 hsa-miR-423-5p 0 0 1
chr17:50136162|50139491 hsa-miR-331-3p 0 0 1
chr17:50136162|50139491 hsa-miR-338-3p 0 0 1
chr17:50136162|50139491 hsa-miR-324-3p 0 0 1
chr17:50136162|50139491 hsa-miR-320b 1 0 1
chr17:50136162|50139491 hsa-miR-320c 0 0 1
chr17:50136162|50139491 hsa-miR-515-3p 0 1 1
chr17:50136162|50139491 hsa-miR-320d 0 0 1
chr17:50136162|50139491 hsa-miR-550 0 0 1
chr17:50136162|50139491 hsa-miR-138 0 0 1
chr17:50136162|50139491 hsa-miR-1254 0 0 1
chr17:50136162|50139491 hsa-miR-346 1 1 0
chr17:50136162|50139491 hsa-miR-608 1 1 0
chr17:50136162|50139491 hsa-miR-611 1 0 0
chr17:50136162|50139491 hsa-miR-636 0 1 0
chr17:50136162|50139491 hsa-miR-933 1 0 0
chr17:50136162|50139491 hsa-miR-1913 1 1 0
chr17:50136162|50139491 hsa-miR-1976 0 1 0
chr17:50136162|50139491 hsa-miR-548q 1 1 0
chr17:50136162|50139491 hsa-miR-2861 1 0 0
chr17:50136162|50139491 hsa-miR-3138 0 1 0
chr17:50136162|50139491 hsa-miR-3153 0 1 0
chr17:50136162|50139491 hsa-miR-3154 0 1 0
chr17:50136162|50139491 hsa-miR-4298 1 0 0
chr17:50136162|50139491 hsa-miR-4308 0 1 0
chr17:50136162|50139491 hsa-miR-4270 1 0 0
chr17:50136162|50139491 hsa-miR-3714 0 1 0
chr17:50136162|50139491 hsa-miR-1268b 1 0 0
chr17:50136162|50139491 hsa-miR-4429 1 0 0
chr17:50136162|50139491 hsa-miR-3135b 1 1 0
chr17:50136162|50139491 hsa-miR-4516 1 1 0
chr17:50136162|50139491 hsa-miR-4651 1 0 0
chr17:50136162|50139491 hsa-miR-4654 1 0 0
chr17:50136162|50139491 hsa-miR-4688 1 0 0
chr17:50136162|50139491 hsa-miR-4736 0 1 0
chr17:50136162|50139491 hsa-miR-4739 1 1 0
chr17:50136162|50139491 hsa-miR-4741 1 0 0
chr17:50136162|50139491 hsa-miR-5787 1 0 0
chr17:50136162|50139491 hsa-miR-6081 1 0 0
chr17:50136162|50139491 hsa-miR-6134 0 1 0
chr17:50136162|50139491 hsa-miR-6165 1 1 0
chr17:50136162|50139491 hsa-miR-12118 0 1 0
chr17:50136162|50139491 hsa-miR-125b-2-3p 1 1 0
chr17:50136162|50139491 hsa-miR-18a-3p 0 1 0
chr17:50136162|50139491 hsa-miR-6747-3p 0 1 0
chr17:50136162|50139491 hsa-miR-212-5p 0 1 0
chr17:50136162|50139491 hsa-miR-7106-5p 1 1 0
chr17:50136162|50139491 hsa-miR-3692-5p 0 1 0
chr17:50136162|50139491 hsa-miR-5187-5p 1 0 0
chr17:50136162|50139491 hsa-miR-7114-5p 1 1 0
chr17:50136162|50139491 hsa-miR-6515-5p 0 1 0
chr17:50136162|50139491 hsa-miR-6089 1 0 0
chr17:50136162|50139491 hsa-miR-6880-5p 0 1 0
chr17:50136162|50139491 hsa-miR-7847-3p 0 1 0
chr17:50136162|50139491 hsa-miR-4722-5p 1 0 0
chr17:50136162|50139491 hsa-miR-432-5p 1 0 0
chr17:50136162|50139491 hsa-miR-659-3p 1 0 0
chr17:50136162|50139491 hsa-miR-6748-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6732-5p 1 1 0
chr17:50136162|50139491 hsa-miR-6782-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6874-5p 1 1 0
chr17:50136162|50139491 hsa-miR-30b-3p 0 1 0
chr17:50136162|50139491 hsa-miR-6882-3p 1 0 0
chr17:50136162|50139491 hsa-miR-7109-5p 1 1 0
chr17:50136162|50139491 hsa-miR-4738-3p 1 0 0
chr17:50136162|50139491 hsa-miR-4763-5p 1 1 0
chr17:50136162|50139491 hsa-miR-1909-5p 1 1 0
chr17:50136162|50139491 hsa-miR-3944-3p 1 0 0
chr17:50136162|50139491 hsa-miR-6894-3p 0 1 0
chr17:50136162|50139491 hsa-miR-4640-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6514-3p 0 1 0
chr17:50136162|50139491 hsa-miR-7113-3p 1 0 0
chr17:50136162|50139491 hsa-miR-4690-5p 1 0 0
chr17:50136162|50139491 hsa-miR-4732-5p 1 1 0
chr17:50136162|50139491 hsa-miR-4713-3p 0 1 0
chr17:50136162|50139491 hsa-miR-6749-5p 1 0 0
chr17:50136162|50139491 hsa-miR-4787-5p 1 0 0
chr17:50136162|50139491 hsa-miR-3160-3p 0 1 0
chr17:50136162|50139491 hsa-miR-149-3p 1 0 0
chr17:50136162|50139491 hsa-miR-146b-3p 0 1 0
chr17:50136162|50139491 hsa-miR-6781-5p 1 0 0
chr17:50136162|50139491 hsa-miR-3678-3p 0 1 0
chr17:50136162|50139491 hsa-miR-7846-3p 1 0 0
chr17:50136162|50139491 hsa-miR-584-3p 0 1 0
chr17:50136162|50139491 hsa-miR-4758-3p 1 1 0
chr17:50136162|50139491 hsa-miR-1288-5p 0 1 0
chr17:50136162|50139491 hsa-miR-2276-5p 0 1 0
chr17:50136162|50139491 hsa-miR-4749-3p 0 1 0
chr17:50136162|50139491 hsa-miR-6760-3p 0 1 0
chr17:50136162|50139491 hsa-miR-6748-3p 0 1 0
chr17:50136162|50139491 hsa-miR-3157-3p 0 1 0
chr17:50136162|50139491 hsa-miR-6890-3p 0 1 0
chr17:50136162|50139491 hsa-miR-1207-5p 1 0 0
chr17:50136162|50139491 hsa-miR-1233-5p 1 1 0
chr17:50136162|50139491 hsa-miR-4763-3p 1 0 0
chr17:50136162|50139491 hsa-miR-6769b-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6778-5p 1 1 0
chr17:50136162|50139491 hsa-miR-6816-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6865-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6870-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6893-5p 1 0 0
chr17:50136162|50139491 hsa-miR-1343-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6726-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6737-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6743-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6752-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6754-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6756-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6769a-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6803-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6819-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6851-5p 1 1 0
chr17:50136162|50139491 hsa-miR-7107-5p 1 0 0
chr17:50136162|50139491 hsa-miR-7110-5p 1 0 0
chr17:50136162|50139491 hsa-miR-11181-3p 1 1 0
chr17:50136162|50139491 hsa-miR-1249-5p 1 1 0
chr17:50136162|50139491 hsa-miR-6722-3p 1 0 0
chr17:50136162|50139491 hsa-miR-6751-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6779-5p 1 1 0
chr17:50136162|50139491 hsa-miR-6780a-5p 0 1 0
chr17:50136162|50139491 hsa-miR-6797-5p 0 1 0
chr17:50136162|50139491 hsa-miR-6808-5p 0 1 0
chr17:50136162|50139491 hsa-miR-6879-5p 1 0 0
chr17:50136162|50139491 hsa-miR-7111-5p 1 0 0
chr17:50136162|50139491 hsa-miR-4685-3p 1 0 0
chr17:50136162|50139491 hsa-miR-4728-5p 1 1 0
chr17:50136162|50139491 hsa-miR-5196-5p 0 1 0
chr17:50136162|50139491 hsa-miR-6780b-5p 0 1 0
chr17:50136162|50139491 hsa-miR-6836-5p 1 1 0
chr17:50136162|50139491 hsa-miR-10396b-5p 1 0 0
chr17:50136162|50139491 hsa-miR-1909-3p 1 0 0
chr17:50136162|50139491 hsa-miR-328-5p 1 0 0
chr17:50136162|50139491 hsa-miR-3689a-3p 0 1 0
chr17:50136162|50139491 hsa-miR-449c-5p 1 0 0
chr17:50136162|50139491 hsa-miR-4649-5p 1 0 0
chr17:50136162|50139491 hsa-miR-4685-5p 0 1 0
chr17:50136162|50139491 hsa-miR-4726-5p 1 0 0
chr17:50136162|50139491 hsa-miR-4745-5p 1 0 0
chr17:50136162|50139491 hsa-miR-675-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6795-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6858-5p 1 1 0
chr17:50136162|50139491 hsa-miR-4436b-3p 1 0 0
chr17:50136162|50139491 hsa-miR-6511a-5p 0 1 0
chr17:50136162|50139491 hsa-miR-3116 0 1 0
chr17:50136162|50139491 hsa-miR-6891-5p 1 1 0
chr17:50136162|50139491 hsa-miR-6785-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6724-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6791-5p 1 0 0
chr17:50136162|50139491 hsa-miR-6529-5p 0 1 0
chr17:50136162|50139491 hsa-miR-10400-3p 1 0 0
chr17:50136162|50139491 hsa-miR-10394-5p 0 1 0
chr17:50136162|50139491 hsa-miR-6843-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:50136162|50139491
ORF Type ORF1
Protein Length 63
Nucleotide Length 192
Protein Sequence MLQALQLSFQLLDLCLSDRMLDLELLGRGAGTQLQQGGAGSAKGRRPACLSLHHSREPLLPPP
Nucleotide Sequence CTGCTCCAGGCTCTGCAGCTTTCTTTTCAGCTGCTGGATCTCTGCCTCAGTGACCGCATGCTTGATCTGGAGCTGTTGGGCAGAGGGGCAGGCACTCAGCTCCAGCAGGGTGGGGCAGGCAGTGCCAAGGGCAGGAGACCTGCCTGCCTTTCCCTCCACCACTCCAGGGAGCCCCTCCTCCCACCTCCTTGA
CircID chr17:50136162|50139491
ORF Type ORF2
Protein Length 62
Nucleotide Length 186
Protein Sequence MIWSCWAEGQALSSSRVGQAVPRAGDLPAFPSTTPGSPSSHLLELVHQLLGLHVHRGQCILV
Nucleotide Sequence TTGATCTGGAGCTGTTGGGCAGAGGGGCAGGCACTCAGCTCCAGCAGGGTGGGGCAGGCAGTGCCAAGGGCAGGAGACCTGCCTGCCTTTCCCTCCACCACTCCAGGGAGCCCCTCCTCCCACCTCCTTGAACTTGTGCACCAGCTTCTCGGGCTCCATGTCCACAGGGGACAGTGCATCCTCGTT
CircID chr17:50136162|50139491
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MPFPPPLQGAPPPTSLNLCTSFSGSMSTGDSASS
Nucleotide Sequence CTGCCTTTCCCTCCACCACTCCAGGGAGCCCCTCCTCCCACCTCCTTGAACTTGTGCACCAGCTTCTCGGGCTCCATGTCCACAGGGGACAGTGCATCCTCG
CircID chr17:50136162|50139491
ORF Type ORF4
Protein Length 62
Nucleotide Length 189
Protein Sequence MSPVDMEPEKLVHKFKEVGGGAPWSGGGKGRQVSCPWHCLPHPAGAECLPLCPTAPDQACGH
Nucleotide Sequence CTGTCCCCTGTGGACATGGAGCCCGAGAAGCTGGTGCACAAGTTCAAGGAGGTGGGAGGAGGGGCTCCCTGGAGTGGTGGAGGGAAAGGCAGGCAGGTCTCCTGCCCTTGGCACTGCCTGCCCCACCCTGCTGGAGCTGAGTGCCTGCCCCTCTGCCCAACAGCTCCAGATCAAGCATGCGGTCACTGA
CircID chr17:50136162|50139491
ORF Type ORF5
Protein Length 86
Nucleotide Length 258
Protein Sequence MHCPLWTWSPRSWCTSSRRWEEGLPGVVEGKAGRSPALGTACPTLLELSACPSAQQLQIKHAVTEAEIQQLKRKLQSLEQEKGRWR
Nucleotide Sequence ATGCACTGTCCCCTGTGGACATGGAGCCCGAGAAGCTGGTGCACAAGTTCAAGGAGGTGGGAGGAGGGGCTCCCTGGAGTGGTGGAGGGAAAGGCAGGCAGGTCTCCTGCCCTTGGCACTGCCTGCCCCACCCTGCTGGAGCTGAGTGCCTGCCCCTCTGCCCAACAGCTCCAGATCAAGCATGCGGTCACTGAGGCAGAGATCCAGCAGCTGAAAAGAAAGCTGCAGAGCCTGGAGCAGGAGAAGGGGCGCTGGCGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab