CircRNA Information

General Information
circRNA Basic Information
CircID chr17:50167454|50167637
Strand -
CircType exon
Host Gene ENSG00000108823.14;
Algorism CIRI2;
Sequence CATGAGACGTTTCTGAGCCTTCCTGAGCATGTCGGTGAGCGGCCTGACAGGCACCCAGGCGGGCGGGCTGGGGTGTACCCCGCAGGGCTCCTGCTGTGACTCGAATCCCCTCTCCTCGCTTCCACCAGCTGTCCCACCCGCTGTCCACATCACCTACCACGCCCACCTCCAGGGACACCCAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:50167454|50167637 hsa-miR-214-5p 0 0 1
chr17:50167454|50167637 hsa-miR-214-3p 0 0 1
chr17:50167454|50167637 hsa-miR-585-5p 0 0 1
chr17:50167454|50167637 hsa-miR-585-3p 0 0 1
chr17:50167454|50167637 hsa-miR-609 0 0 1
chr17:50167454|50167637 hsa-miR-661 0 1 1
chr17:50167454|50167637 hsa-miR-541-5p 0 0 1
chr17:50167454|50167637 hsa-miR-541-3p 0 0 1
chr17:50167454|50167637 hsa-miR-744-5p 0 0 1
chr17:50167454|50167637 hsa-miR-744-3p 0 0 1
chr17:50167454|50167637 hsa-miR-873-5p 0 0 1
chr17:50167454|50167637 hsa-miR-873-3p 0 0 1
chr17:50167454|50167637 hsa-miR-671-5p 1 0 1
chr17:50167454|50167637 hsa-miR-654-5p 1 0 1
chr17:50167454|50167637 hsa-miR-1207-3p 0 0 1
chr17:50167454|50167637 hsa-miR-1302 0 0 1
chr17:50167454|50167637 hsa-miR-151-5p 0 0 1
chr17:50167454|50167637 hsa-miR-1233 0 0 1
chr17:50167454|50167637 hsa-miR-550 0 0 1
chr17:50167454|50167637 hsa-miR-138 0 0 1
chr17:50167454|50167637 hsa-miR-1268 0 0 1
chr17:50167454|50167637 hsa-miR-24 0 0 1
chr17:50167454|50167637 hsa-miR-886-3p 0 0 1
chr17:50167454|50167637 hsa-miR-608 1 0 0
chr17:50167454|50167637 hsa-miR-611 1 0 0
chr17:50167454|50167637 hsa-miR-637 1 0 0
chr17:50167454|50167637 hsa-miR-638 1 0 0
chr17:50167454|50167637 hsa-miR-765 1 0 0
chr17:50167454|50167637 hsa-miR-920 1 0 0
chr17:50167454|50167637 hsa-miR-1293 1 0 0
chr17:50167454|50167637 hsa-miR-1268a 1 1 0
chr17:50167454|50167637 hsa-miR-718 1 0 0
chr17:50167454|50167637 hsa-miR-2861 1 0 0
chr17:50167454|50167637 hsa-miR-3131 1 0 0
chr17:50167454|50167637 hsa-miR-3138 1 1 0
chr17:50167454|50167637 hsa-miR-3141 1 0 0
chr17:50167454|50167637 hsa-miR-3147 1 0 0
chr17:50167454|50167637 hsa-miR-4298 1 1 0
chr17:50167454|50167637 hsa-miR-4322 1 0 0
chr17:50167454|50167637 hsa-miR-3652 1 0 0
chr17:50167454|50167637 hsa-miR-3911 1 0 0
chr17:50167454|50167637 hsa-miR-1268b 1 1 0
chr17:50167454|50167637 hsa-miR-4430 1 0 0
chr17:50167454|50167637 hsa-miR-4450 0 1 0
chr17:50167454|50167637 hsa-miR-4454 1 0 0
chr17:50167454|50167637 hsa-miR-4458 1 0 0
chr17:50167454|50167637 hsa-miR-4476 0 1 0
chr17:50167454|50167637 hsa-miR-4481 1 0 0
chr17:50167454|50167637 hsa-miR-4488 1 0 0
chr17:50167454|50167637 hsa-miR-4491 0 1 0
chr17:50167454|50167637 hsa-miR-4505 1 0 0
chr17:50167454|50167637 hsa-miR-4507 1 0 0
chr17:50167454|50167637 hsa-miR-4525 1 0 0
chr17:50167454|50167637 hsa-miR-4648 1 1 0
chr17:50167454|50167637 hsa-miR-4651 1 1 0
chr17:50167454|50167637 hsa-miR-4654 1 0 0
chr17:50167454|50167637 hsa-miR-4657 0 1 0
chr17:50167454|50167637 hsa-miR-4669 1 0 0
chr17:50167454|50167637 hsa-miR-4688 1 0 0
chr17:50167454|50167637 hsa-miR-4689 1 0 0
chr17:50167454|50167637 hsa-miR-4706 1 0 0
chr17:50167454|50167637 hsa-miR-4734 0 1 0
chr17:50167454|50167637 hsa-miR-4739 1 0 0
chr17:50167454|50167637 hsa-miR-4767 1 0 0
chr17:50167454|50167637 hsa-miR-5090 1 0 0
chr17:50167454|50167637 hsa-miR-5093 1 0 0
chr17:50167454|50167637 hsa-miR-5192 1 0 0
chr17:50167454|50167637 hsa-miR-5787 1 0 0
chr17:50167454|50167637 hsa-miR-6090 1 1 0
chr17:50167454|50167637 hsa-miR-6133 1 0 0
chr17:50167454|50167637 hsa-miR-6134 1 0 0
chr17:50167454|50167637 hsa-miR-6165 0 1 0
chr17:50167454|50167637 hsa-miR-6745 1 0 0
chr17:50167454|50167637 hsa-miR-6860 1 0 0
chr17:50167454|50167637 hsa-miR-7704 1 0 0
chr17:50167454|50167637 hsa-miR-8075 1 0 0
chr17:50167454|50167637 hsa-miR-8085 1 0 0
chr17:50167454|50167637 hsa-miR-12114 1 0 0
chr17:50167454|50167637 hsa-miR-138-5p 1 0 0
chr17:50167454|50167637 hsa-miR-4433b-3p 1 0 0
chr17:50167454|50167637 hsa-miR-6734-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6747-5p 1 0 0
chr17:50167454|50167637 hsa-miR-210-3p 1 0 0
chr17:50167454|50167637 hsa-miR-6861-5p 1 0 0
chr17:50167454|50167637 hsa-miR-7106-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6825-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6857-5p 1 0 0
chr17:50167454|50167637 hsa-miR-4687-3p 1 0 0
chr17:50167454|50167637 hsa-miR-766-3p 0 1 0
chr17:50167454|50167637 hsa-miR-6799-5p 1 0 0
chr17:50167454|50167637 hsa-miR-8071 1 0 0
chr17:50167454|50167637 hsa-miR-6804-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6833-5p 1 0 0
chr17:50167454|50167637 hsa-miR-7114-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6515-5p 1 0 0
chr17:50167454|50167637 hsa-miR-3192-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6880-5p 1 0 0
chr17:50167454|50167637 hsa-miR-7847-3p 1 1 0
chr17:50167454|50167637 hsa-miR-4722-5p 0 1 0
chr17:50167454|50167637 hsa-miR-1301-3p 1 0 0
chr17:50167454|50167637 hsa-miR-6741-5p 1 1 0
chr17:50167454|50167637 hsa-miR-6759-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6721-5p 1 0 0
chr17:50167454|50167637 hsa-miR-4655-5p 1 0 0
chr17:50167454|50167637 hsa-miR-197-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6776-5p 1 1 0
chr17:50167454|50167637 hsa-miR-432-5p 1 0 0
chr17:50167454|50167637 hsa-miR-7845-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6742-5p 0 1 0
chr17:50167454|50167637 hsa-miR-503-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6748-5p 1 1 0
chr17:50167454|50167637 hsa-miR-6772-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6732-5p 1 0 0
chr17:50167454|50167637 hsa-miR-3190-3p 1 0 0
chr17:50167454|50167637 hsa-miR-6827-5p 1 0 0
chr17:50167454|50167637 hsa-miR-23a-5p 1 0 0
chr17:50167454|50167637 hsa-miR-3126-5p 1 0 0
chr17:50167454|50167637 hsa-miR-486-3p 1 0 0
chr17:50167454|50167637 hsa-miR-6782-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6821-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6810-5p 1 0 0
chr17:50167454|50167637 hsa-miR-7109-5p 1 0 0
chr17:50167454|50167637 hsa-miR-1226-5p 1 0 0
chr17:50167454|50167637 hsa-miR-7108-3p 0 1 0
chr17:50167454|50167637 hsa-miR-4707-3p 0 1 0
chr17:50167454|50167637 hsa-miR-1229-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6514-3p 0 1 0
chr17:50167454|50167637 hsa-miR-885-3p 1 0 0
chr17:50167454|50167637 hsa-miR-1228-5p 1 0 0
chr17:50167454|50167637 hsa-miR-3202 1 0 0
chr17:50167454|50167637 hsa-miR-7854-3p 1 0 0
chr17:50167454|50167637 hsa-miR-3648 1 0 0
chr17:50167454|50167637 hsa-miR-4787-5p 1 0 0
chr17:50167454|50167637 hsa-miR-149-3p 1 0 0
chr17:50167454|50167637 hsa-miR-6824-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6800-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6802-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6828-5p 1 0 0
chr17:50167454|50167637 hsa-miR-423-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6743-3p 0 1 0
chr17:50167454|50167637 hsa-miR-381-5p 1 0 0
chr17:50167454|50167637 hsa-miR-670-5p 1 0 0
chr17:50167454|50167637 hsa-miR-1233-5p 1 0 0
chr17:50167454|50167637 hsa-miR-4763-3p 1 0 0
chr17:50167454|50167637 hsa-miR-6769b-5p 1 1 0
chr17:50167454|50167637 hsa-miR-6778-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6787-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6816-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6865-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6870-5p 1 0 0
chr17:50167454|50167637 hsa-miR-1343-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6726-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6737-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6743-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6752-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6756-5p 1 1 0
chr17:50167454|50167637 hsa-miR-6769a-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6803-5p 1 1 0
chr17:50167454|50167637 hsa-miR-6815-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6819-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6851-5p 1 0 0
chr17:50167454|50167637 hsa-miR-7110-5p 1 0 0
chr17:50167454|50167637 hsa-miR-10401-5p 1 0 0
chr17:50167454|50167637 hsa-miR-11181-3p 1 0 0
chr17:50167454|50167637 hsa-miR-1249-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6751-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6779-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6780a-5p 1 0 0
chr17:50167454|50167637 hsa-miR-7111-5p 1 0 0
chr17:50167454|50167637 hsa-miR-4728-5p 1 0 0
chr17:50167454|50167637 hsa-miR-5196-5p 1 0 0
chr17:50167454|50167637 hsa-miR-1237-5p 1 0 0
chr17:50167454|50167637 hsa-miR-1909-3p 1 0 0
chr17:50167454|50167637 hsa-miR-328-5p 1 0 0
chr17:50167454|50167637 hsa-miR-3689a-3p 1 0 0
chr17:50167454|50167637 hsa-miR-4632-5p 1 0 0
chr17:50167454|50167637 hsa-miR-4649-5p 1 0 0
chr17:50167454|50167637 hsa-miR-4701-3p 1 0 0
chr17:50167454|50167637 hsa-miR-4749-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6729-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6738-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6777-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6795-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6858-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6887-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6889-5p 1 0 0
chr17:50167454|50167637 hsa-miR-3187-5p 1 0 0
chr17:50167454|50167637 hsa-miR-939-5p 1 0 0
chr17:50167454|50167637 hsa-miR-4758-5p 1 0 0
chr17:50167454|50167637 hsa-miR-4769-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6731-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6758-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6856-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6799-3p 0 1 0
chr17:50167454|50167637 hsa-miR-1914-3p 1 0 0
chr17:50167454|50167637 hsa-miR-6736-5p 1 0 0
chr17:50167454|50167637 hsa-miR-4700-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6891-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6766-5p 1 1 0
chr17:50167454|50167637 hsa-miR-6785-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6790-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6849-5p 1 0 0
chr17:50167454|50167637 hsa-miR-6791-5p 1 1 0
chr17:50167454|50167637 hsa-miR-320a-3p 1 0 0
chr17:50167454|50167637 hsa-miR-320b 1 0 0
chr17:50167454|50167637 hsa-miR-320c 1 0 0
chr17:50167454|50167637 hsa-miR-362-5p 1 0 0
chr17:50167454|50167637 hsa-miR-3619-5p 0 1 0
chr17:50167454|50167637 hsa-miR-151a-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:50167454|50167637
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MSLPEHVGERPDRHPGGRAGVYPAGLLL
Nucleotide Sequence CTGAGCCTTCCTGAGCATGTCGGTGAGCGGCCTGACAGGCACCCAGGCGGGCGGGCTGGGGTGTACCCCGCAGGGCTCCTGCTGTGA
CircID chr17:50167454|50167637
ORF Type ORF2
Protein Length 54
Nucleotide Length 162
Protein Sequence MSMSVSGLTGTQAGGLGCTPQGSCCDSNPLSSLPPAVPPAVHITYHAHLQGHPD
Nucleotide Sequence CTGAGCATGTCGGTGAGCGGCCTGACAGGCACCCAGGCGGGCGGGCTGGGGTGTACCCCGCAGGGCTCCTGCTGTGACTCGAATCCCCTCTCCTCGCTTCCACCAGCTGTCCCACCCGCTGTCCACATCACCTACCACGCCCACCTCCAGGGACACCCAGAC
CircID chr17:50167454|50167637
ORF Type ORF3
Protein Length 57
Nucleotide Length 171
Protein Sequence MEVGVVGDVDSGWDSWWKRGEGIRVTAGALRGTPQPARLGACQAAHRHAQEGSETSH
Nucleotide Sequence CTGGAGGTGGGCGTGGTAGGTGATGTGGACAGCGGGTGGGACAGCTGGTGGAAGCGAGGAGAGGGGATTCGAGTCACAGCAGGAGCCCTGCGGGGTACACCCCAGCCCGCCCGCCTGGGTGCCTGTCAGGCCGCTCACCGACATGCTCAGGAAGGCTCAGAAACGTCTCAT
CircID chr17:50167454|50167637
ORF Type ORF4
Protein Length 50
Nucleotide Length 150
Protein Sequence MWTAGGTAGGSEERGFESQQEPCGVHPSPPAWVPVRPLTDMLRKAQKRLM
Nucleotide Sequence ATGTGGACAGCGGGTGGGACAGCTGGTGGAAGCGAGGAGAGGGGATTCGAGTCACAGCAGGAGCCCTGCGGGGTACACCCCAGCCCGCCCGCCTGGGTGCCTGTCAGGCCGCTCACCGACATGCTCAGGAAGGCTCAGAAACGTCTCATG
CircID chr17:50167454|50167637
ORF Type ORF5
Protein Length 42
Nucleotide Length 126
Protein Sequence MVEARRGDSSHSRSPAGYTPARPPGCLSGRSPTCSGRLRNVS
Nucleotide Sequence CTGGTGGAAGCGAGGAGAGGGGATTCGAGTCACAGCAGGAGCCCTGCGGGGTACACCCCAGCCCGCCCGCCTGGGTGCCTGTCAGGCCGCTCACCGACATGCTCAGGAAGGCTCAGAAACGTCTCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab