CircRNA Information

General Information
circRNA Basic Information
CircID chr17:50184213|50184382
Strand +
CircType exon
Host Gene ENSG00000108821.12;
Algorism CIRI2;
Sequence CCTCTCTCCACCTGCCTCTGGCTTCTCAGGCCTCTGCTCTCCGACCTCTCTCCTCTGAAACCCTCCTCCACAGCTGCAGCCCATCCTCCCGGCTCCCTCCTAGTCTGTCCTGCGTCCTCTGTCCCCGGGTTTCAGAGACAACTTCCCAAAGCACAAAGCAGTTTTTCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:50184213|50184382 hsa-miR-185-5p 0 0 1
chr17:50184213|50184382 hsa-miR-185-3p 0 0 1
chr17:50184213|50184382 hsa-miR-382-5p 0 0 1
chr17:50184213|50184382 hsa-miR-382-3p 0 0 1
chr17:50184213|50184382 hsa-miR-593-5p 0 0 1
chr17:50184213|50184382 hsa-miR-593-3p 0 0 1
chr17:50184213|50184382 hsa-miR-636 0 0 1
chr17:50184213|50184382 hsa-miR-1301-5p 0 0 1
chr17:50184213|50184382 hsa-miR-1301-3p 0 0 1
chr17:50184213|50184382 hsa-miR-765 1 1 1
chr17:50184213|50184382 hsa-miR-940 0 0 1
chr17:50184213|50184382 hsa-miR-548e-5p 0 0 1
chr17:50184213|50184382 hsa-miR-548e-3p 0 0 1
chr17:50184213|50184382 hsa-miR-1286 0 1 1
chr17:50184213|50184382 hsa-miR-1253 0 0 1
chr17:50184213|50184382 hsa-miR-1827 0 0 1
chr17:50184213|50184382 hsa-miR-1184 0 0 1
chr17:50184213|50184382 hsa-miR-548a-3p 0 0 1
chr17:50184213|50184382 hsa-miR-548f 0 0 1
chr17:50184213|50184382 hsa-miR-1300 0 0 1
chr17:50184213|50184382 hsa-miR-218 0 0 1
chr17:50184213|50184382 hsa-miR-198 1 0 0
chr17:50184213|50184382 hsa-miR-601 1 0 0
chr17:50184213|50184382 hsa-miR-658 1 0 0
chr17:50184213|50184382 hsa-miR-762 1 0 0
chr17:50184213|50184382 hsa-miR-2861 1 0 0
chr17:50184213|50184382 hsa-miR-3125 1 0 0
chr17:50184213|50184382 hsa-miR-3132 1 0 0
chr17:50184213|50184382 hsa-miR-3138 1 0 0
chr17:50184213|50184382 hsa-miR-3141 1 0 0
chr17:50184213|50184382 hsa-miR-3148 1 1 0
chr17:50184213|50184382 hsa-miR-3175 1 1 0
chr17:50184213|50184382 hsa-miR-4298 1 0 0
chr17:50184213|50184382 hsa-miR-4322 1 0 0
chr17:50184213|50184382 hsa-miR-4257 1 0 0
chr17:50184213|50184382 hsa-miR-3665 0 1 0
chr17:50184213|50184382 hsa-miR-4436a 0 1 0
chr17:50184213|50184382 hsa-miR-4463 1 0 0
chr17:50184213|50184382 hsa-miR-4468 0 1 0
chr17:50184213|50184382 hsa-miR-4489 1 0 0
chr17:50184213|50184382 hsa-miR-2392 1 0 0
chr17:50184213|50184382 hsa-miR-4510 0 1 0
chr17:50184213|50184382 hsa-miR-4516 1 0 0
chr17:50184213|50184382 hsa-miR-4525 1 0 0
chr17:50184213|50184382 hsa-miR-4533 1 0 0
chr17:50184213|50184382 hsa-miR-1587 0 1 0
chr17:50184213|50184382 hsa-miR-4538 1 0 0
chr17:50184213|50184382 hsa-miR-3960 1 0 0
chr17:50184213|50184382 hsa-miR-4644 1 1 0
chr17:50184213|50184382 hsa-miR-4651 1 0 0
chr17:50184213|50184382 hsa-miR-4656 1 0 0
chr17:50184213|50184382 hsa-miR-4689 1 1 0
chr17:50184213|50184382 hsa-miR-4706 1 0 0
chr17:50184213|50184382 hsa-miR-4739 1 1 0
chr17:50184213|50184382 hsa-miR-4741 1 0 0
chr17:50184213|50184382 hsa-miR-4784 1 0 0
chr17:50184213|50184382 hsa-miR-5047 0 1 0
chr17:50184213|50184382 hsa-miR-5192 1 0 0
chr17:50184213|50184382 hsa-miR-5705 1 0 0
chr17:50184213|50184382 hsa-miR-5739 1 0 0
chr17:50184213|50184382 hsa-miR-6081 1 0 0
chr17:50184213|50184382 hsa-miR-6086 1 0 0
chr17:50184213|50184382 hsa-miR-6090 1 0 0
chr17:50184213|50184382 hsa-miR-6125 1 0 0
chr17:50184213|50184382 hsa-miR-6127 1 1 0
chr17:50184213|50184382 hsa-miR-6129 0 1 0
chr17:50184213|50184382 hsa-miR-6133 1 1 0
chr17:50184213|50184382 hsa-miR-6165 1 0 0
chr17:50184213|50184382 hsa-miR-8085 1 1 0
chr17:50184213|50184382 hsa-miR-8089 1 1 0
chr17:50184213|50184382 hsa-miR-146a-3p 0 1 0
chr17:50184213|50184382 hsa-miR-6734-5p 1 0 0
chr17:50184213|50184382 hsa-miR-504-3p 1 0 0
chr17:50184213|50184382 hsa-miR-671-5p 1 0 0
chr17:50184213|50184382 hsa-miR-3150a-3p 1 0 0
chr17:50184213|50184382 hsa-miR-7106-5p 1 1 0
chr17:50184213|50184382 hsa-miR-6894-5p 1 1 0
chr17:50184213|50184382 hsa-miR-205-3p 0 1 0
chr17:50184213|50184382 hsa-miR-125a-3p 1 0 0
chr17:50184213|50184382 hsa-miR-6799-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6510-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6804-5p 0 1 0
chr17:50184213|50184382 hsa-miR-7851-3p 1 1 0
chr17:50184213|50184382 hsa-miR-7114-5p 1 1 0
chr17:50184213|50184382 hsa-miR-6089 1 0 0
chr17:50184213|50184382 hsa-miR-6807-5p 1 0 0
chr17:50184213|50184382 hsa-miR-3192-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6880-5p 0 1 0
chr17:50184213|50184382 hsa-miR-7847-3p 1 1 0
chr17:50184213|50184382 hsa-miR-4695-5p 1 0 0
chr17:50184213|50184382 hsa-miR-3622b-5p 1 0 0
chr17:50184213|50184382 hsa-miR-197-5p 1 0 0
chr17:50184213|50184382 hsa-miR-3605-5p 1 1 0
chr17:50184213|50184382 hsa-miR-3180-3p 1 0 0
chr17:50184213|50184382 hsa-miR-6796-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6829-5p 0 1 0
chr17:50184213|50184382 hsa-miR-6805-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6827-5p 1 1 0
chr17:50184213|50184382 hsa-miR-6798-5p 1 0 0
chr17:50184213|50184382 hsa-miR-2467-3p 1 1 0
chr17:50184213|50184382 hsa-miR-6782-5p 1 0 0
chr17:50184213|50184382 hsa-miR-3150b-3p 1 0 0
chr17:50184213|50184382 hsa-miR-6810-5p 0 1 0
chr17:50184213|50184382 hsa-miR-5008-5p 1 0 0
chr17:50184213|50184382 hsa-miR-5006-5p 1 0 0
chr17:50184213|50184382 hsa-miR-5088-5p 1 0 0
chr17:50184213|50184382 hsa-miR-1226-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6740-5p 1 0 0
chr17:50184213|50184382 hsa-miR-204-3p 0 1 0
chr17:50184213|50184382 hsa-miR-193b-5p 0 1 0
chr17:50184213|50184382 hsa-miR-6771-5p 1 0 0
chr17:50184213|50184382 hsa-miR-92b-5p 1 1 0
chr17:50184213|50184382 hsa-miR-877-5p 1 0 0
chr17:50184213|50184382 hsa-miR-4732-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6749-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6847-5p 1 1 0
chr17:50184213|50184382 hsa-miR-149-3p 1 0 0
chr17:50184213|50184382 hsa-miR-6824-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6789-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6781-5p 1 0 0
chr17:50184213|50184382 hsa-miR-3191-3p 1 0 0
chr17:50184213|50184382 hsa-miR-7846-3p 1 0 0
chr17:50184213|50184382 hsa-miR-6499-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6801-5p 1 1 0
chr17:50184213|50184382 hsa-miR-6761-5p 1 0 0
chr17:50184213|50184382 hsa-miR-431-3p 1 0 0
chr17:50184213|50184382 hsa-miR-4520-3p 1 0 0
chr17:50184213|50184382 hsa-miR-1207-5p 1 0 0
chr17:50184213|50184382 hsa-miR-1233-5p 1 0 0
chr17:50184213|50184382 hsa-miR-1273h-5p 1 0 0
chr17:50184213|50184382 hsa-miR-4763-3p 1 0 0
chr17:50184213|50184382 hsa-miR-6769b-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6778-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6787-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6893-5p 0 1 0
chr17:50184213|50184382 hsa-miR-1343-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6726-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6743-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6754-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6756-5p 1 1 0
chr17:50184213|50184382 hsa-miR-6851-5p 1 0 0
chr17:50184213|50184382 hsa-miR-7110-5p 1 0 0
chr17:50184213|50184382 hsa-miR-11181-3p 1 1 0
chr17:50184213|50184382 hsa-miR-1249-5p 1 1 0
chr17:50184213|50184382 hsa-miR-6722-3p 1 1 0
chr17:50184213|50184382 hsa-miR-6779-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6780a-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6797-5p 1 1 0
chr17:50184213|50184382 hsa-miR-6808-5p 0 1 0
chr17:50184213|50184382 hsa-miR-6879-5p 1 1 0
chr17:50184213|50184382 hsa-miR-3620-5p 0 1 0
chr17:50184213|50184382 hsa-miR-4728-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6836-5p 1 0 0
chr17:50184213|50184382 hsa-miR-1237-5p 1 0 0
chr17:50184213|50184382 hsa-miR-1909-3p 1 0 0
chr17:50184213|50184382 hsa-miR-328-5p 1 0 0
chr17:50184213|50184382 hsa-miR-4649-5p 1 0 0
chr17:50184213|50184382 hsa-miR-4726-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6729-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6735-5p 1 1 0
chr17:50184213|50184382 hsa-miR-6738-5p 1 1 0
chr17:50184213|50184382 hsa-miR-6777-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6795-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6848-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6858-5p 1 1 0
chr17:50184213|50184382 hsa-miR-6883-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6887-5p 1 1 0
chr17:50184213|50184382 hsa-miR-6889-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6831-5p 1 0 0
chr17:50184213|50184382 hsa-miR-939-5p 1 1 0
chr17:50184213|50184382 hsa-miR-30c-1-3p 1 0 0
chr17:50184213|50184382 hsa-miR-6731-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6758-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6856-5p 1 1 0
chr17:50184213|50184382 hsa-miR-1914-3p 1 0 0
chr17:50184213|50184382 hsa-miR-4646-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6891-5p 1 0 0
chr17:50184213|50184382 hsa-miR-6785-5p 1 1 0
chr17:50184213|50184382 hsa-miR-4667-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:50184213|50184382
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MLSDLSPLKPSSTAAAHPPGSLLVCPASSVPGFQRQLPKAQSSFS
Nucleotide Sequence CTGCTCTCCGACCTCTCTCCTCTGAAACCCTCCTCCACAGCTGCAGCCCATCCTCCCGGCTCCCTCCTAGTCTGTCCTGCGTCCTCTGTCCCCGGGTTTCAGAGACAACTTCCCAAAGCACAAAGCAGTTTTTCC
CircID chr17:50184213|50184382
ORF Type ORF2
Protein Length 53
Nucleotide Length 159
Protein Sequence MPLASQASALRPLSSETLLHSCSPSSRLPPSLSCVLCPRVSETTSQSTKQFFP
Nucleotide Sequence CTGCCTCTGGCTTCTCAGGCCTCTGCTCTCCGACCTCTCTCCTCTGAAACCCTCCTCCACAGCTGCAGCCCATCCTCCCGGCTCCCTCCTAGTCTGTCCTGCGTCCTCTGTCCCCGGGTTTCAGAGACAACTTCCCAAAGCACAAAGCAGTTTTTCCCC
CircID chr17:50184213|50184382
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MGCSCGGGFQRREVGEQRPEKPEAGGER
Nucleotide Sequence ATGGGCTGCAGCTGTGGAGGAGGGTTTCAGAGGAGAGAGGTCGGAGAGCAGAGGCCTGAGAAGCCAGAGGCAGGTGGAGAGAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab