CircRNA Information

General Information
circRNA Basic Information
CircID chr17:50185533|50185805
Strand +
CircType exon
Host Gene ENSG00000108821.12;
Algorism CIRI2;
Sequence CTACAGCGTCACTGTCGATGGCTGCACGGTGAGTGCCCAGAATCCCCAGGCAGGGCCCCACCTCTCCGGCCTTGGGCTTTTTGGCCAGGCCATAGTGCCCTCTCTCCATCACTCCCACGTGGTAATGCCCCCTCCCGTTGTCTCCGCCCCACCCCAGAGTCACACCGGAGCCTGGGGCAAGACAGTGATTGAATACAAAACCACCAAGACCTCCCGCCTGCCCATCATCGATGTGGCCCCCTTGGACGTTGGTGCCCCAGACCAGGAATTCGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:50185533|50185805 hsa-miR-134-5p 0 0 1
chr17:50185533|50185805 hsa-miR-134-3p 0 0 1
chr17:50185533|50185805 hsa-miR-185-5p 0 0 1
chr17:50185533|50185805 hsa-miR-185-3p 0 0 1
chr17:50185533|50185805 hsa-miR-34b-5p 0 0 1
chr17:50185533|50185805 hsa-miR-34b-3p 0 0 1
chr17:50185533|50185805 hsa-miR-326 0 0 1
chr17:50185533|50185805 hsa-miR-431-5p 0 0 1
chr17:50185533|50185805 hsa-miR-431-3p 0 0 1
chr17:50185533|50185805 hsa-miR-484 0 0 1
chr17:50185533|50185805 hsa-miR-608 1 1 1
chr17:50185533|50185805 hsa-miR-612 0 0 1
chr17:50185533|50185805 hsa-miR-630 0 0 1
chr17:50185533|50185805 hsa-miR-637 0 1 1
chr17:50185533|50185805 hsa-miR-661 1 1 1
chr17:50185533|50185805 hsa-miR-1208 0 0 1
chr17:50185533|50185805 hsa-miR-1291 0 1 1
chr17:50185533|50185805 hsa-miR-486-3p 0 0 1
chr17:50185533|50185805 hsa-miR-876-3p 0 0 1
chr17:50185533|50185805 hsa-miR-342-5p 0 0 1
chr17:50185533|50185805 hsa-miR-330-5p 0 0 1
chr17:50185533|50185805 hsa-miR-323-5p 0 0 1
chr17:50185533|50185805 hsa-miR-1285 0 0 1
chr17:50185533|50185805 hsa-miR-1254 0 0 1
chr17:50185533|50185805 hsa-miR-663a 1 0 0
chr17:50185533|50185805 hsa-miR-762 1 0 0
chr17:50185533|50185805 hsa-miR-760 1 0 0
chr17:50185533|50185805 hsa-miR-1182 1 0 0
chr17:50185533|50185805 hsa-miR-663b 1 0 0
chr17:50185533|50185805 hsa-miR-1293 1 0 0
chr17:50185533|50185805 hsa-miR-3141 1 0 0
chr17:50185533|50185805 hsa-miR-3147 1 0 0
chr17:50185533|50185805 hsa-miR-3155a 0 1 0
chr17:50185533|50185805 hsa-miR-3196 1 0 0
chr17:50185533|50185805 hsa-miR-4253 1 0 0
chr17:50185533|50185805 hsa-miR-4281 1 0 0
chr17:50185533|50185805 hsa-miR-3652 1 0 0
chr17:50185533|50185805 hsa-miR-3945 1 0 0
chr17:50185533|50185805 hsa-miR-1268b 1 0 0
chr17:50185533|50185805 hsa-miR-3689c 1 0 0
chr17:50185533|50185805 hsa-miR-3155b 0 1 0
chr17:50185533|50185805 hsa-miR-4488 1 0 0
chr17:50185533|50185805 hsa-miR-4489 1 0 0
chr17:50185533|50185805 hsa-miR-2392 1 0 0
chr17:50185533|50185805 hsa-miR-4534 0 1 0
chr17:50185533|50185805 hsa-miR-3960 1 0 0
chr17:50185533|50185805 hsa-miR-4651 1 0 0
chr17:50185533|50185805 hsa-miR-4654 1 0 0
chr17:50185533|50185805 hsa-miR-4705 0 1 0
chr17:50185533|50185805 hsa-miR-4706 1 0 0
chr17:50185533|50185805 hsa-miR-4767 1 0 0
chr17:50185533|50185805 hsa-miR-5091 0 1 0
chr17:50185533|50185805 hsa-miR-5739 1 0 0
chr17:50185533|50185805 hsa-miR-5787 1 0 0
chr17:50185533|50185805 hsa-miR-6090 1 0 0
chr17:50185533|50185805 hsa-miR-6127 1 0 0
chr17:50185533|50185805 hsa-miR-8075 1 0 0
chr17:50185533|50185805 hsa-miR-8085 1 0 0
chr17:50185533|50185805 hsa-miR-8089 1 1 0
chr17:50185533|50185805 hsa-miR-211-3p 1 0 0
chr17:50185533|50185805 hsa-miR-214-5p 1 0 0
chr17:50185533|50185805 hsa-miR-181a-3p 0 1 0
chr17:50185533|50185805 hsa-miR-92a-2-5p 0 1 0
chr17:50185533|50185805 hsa-miR-3194-3p 1 0 0
chr17:50185533|50185805 hsa-miR-6747-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6765-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6861-5p 1 0 0
chr17:50185533|50185805 hsa-miR-7106-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6825-5p 1 1 0
chr17:50185533|50185805 hsa-miR-6857-5p 0 1 0
chr17:50185533|50185805 hsa-miR-25-5p 1 1 0
chr17:50185533|50185805 hsa-miR-6799-5p 1 0 0
chr17:50185533|50185805 hsa-miR-139-3p 1 0 0
chr17:50185533|50185805 hsa-miR-3926 0 1 0
chr17:50185533|50185805 hsa-miR-1227-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6089 1 1 0
chr17:50185533|50185805 hsa-miR-3192-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6880-5p 1 1 0
chr17:50185533|50185805 hsa-miR-4695-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6746-5p 1 0 0
chr17:50185533|50185805 hsa-miR-4722-5p 1 0 0
chr17:50185533|50185805 hsa-miR-1301-3p 1 1 0
chr17:50185533|50185805 hsa-miR-197-5p 1 0 0
chr17:50185533|50185805 hsa-miR-8069 1 0 0
chr17:50185533|50185805 hsa-miR-3189-5p 1 0 0
chr17:50185533|50185805 hsa-miR-3682-3p 1 0 0
chr17:50185533|50185805 hsa-miR-3663-5p 0 1 0
chr17:50185533|50185805 hsa-miR-6742-5p 1 0 0
chr17:50185533|50185805 hsa-miR-3151-5p 0 1 0
chr17:50185533|50185805 hsa-miR-3180-3p 1 1 0
chr17:50185533|50185805 hsa-miR-6732-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6805-5p 1 1 0
chr17:50185533|50185805 hsa-miR-23a-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6798-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6782-5p 1 1 0
chr17:50185533|50185805 hsa-miR-6786-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6852-5p 0 1 0
chr17:50185533|50185805 hsa-miR-1226-5p 1 1 0
chr17:50185533|50185805 hsa-miR-6853-5p 1 0 0
chr17:50185533|50185805 hsa-miR-193b-5p 1 0 0
chr17:50185533|50185805 hsa-miR-4640-5p 1 0 0
chr17:50185533|50185805 hsa-miR-1908-5p 1 0 0
chr17:50185533|50185805 hsa-miR-1228-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6771-5p 1 0 0
chr17:50185533|50185805 hsa-miR-4717-3p 1 0 0
chr17:50185533|50185805 hsa-miR-4787-5p 1 0 0
chr17:50185533|50185805 hsa-miR-149-3p 1 0 0
chr17:50185533|50185805 hsa-miR-6781-5p 1 0 0
chr17:50185533|50185805 hsa-miR-3922-5p 0 1 0
chr17:50185533|50185805 hsa-miR-4750-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6814-5p 0 1 0
chr17:50185533|50185805 hsa-miR-1296-5p 1 0 0
chr17:50185533|50185805 hsa-miR-493-3p 1 0 0
chr17:50185533|50185805 hsa-miR-3173-5p 0 1 0
chr17:50185533|50185805 hsa-miR-329-5p 0 1 0
chr17:50185533|50185805 hsa-miR-10400-5p 1 0 0
chr17:50185533|50185805 hsa-miR-1207-5p 1 0 0
chr17:50185533|50185805 hsa-miR-1233-5p 1 0 0
chr17:50185533|50185805 hsa-miR-1273h-5p 1 0 0
chr17:50185533|50185805 hsa-miR-3689b-3p 1 0 0
chr17:50185533|50185805 hsa-miR-4763-3p 1 0 0
chr17:50185533|50185805 hsa-miR-6769b-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6778-5p 1 1 0
chr17:50185533|50185805 hsa-miR-6787-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6812-5p 1 1 0
chr17:50185533|50185805 hsa-miR-6816-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6870-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6775-5p 1 0 0
chr17:50185533|50185805 hsa-miR-3180 1 1 0
chr17:50185533|50185805 hsa-miR-5001-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6726-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6737-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6743-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6752-5p 1 1 0
chr17:50185533|50185805 hsa-miR-6756-5p 1 1 0
chr17:50185533|50185805 hsa-miR-6803-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6819-5p 1 1 0
chr17:50185533|50185805 hsa-miR-6842-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6851-5p 1 0 0
chr17:50185533|50185805 hsa-miR-7110-5p 1 1 0
chr17:50185533|50185805 hsa-miR-1249-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6751-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6779-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6879-5p 1 0 0
chr17:50185533|50185805 hsa-miR-7111-5p 1 0 0
chr17:50185533|50185805 hsa-miR-4728-5p 1 0 0
chr17:50185533|50185805 hsa-miR-5189-5p 0 1 0
chr17:50185533|50185805 hsa-miR-5196-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6862-5p 1 0 0
chr17:50185533|50185805 hsa-miR-10396b-5p 1 0 0
chr17:50185533|50185805 hsa-miR-1237-5p 1 0 0
chr17:50185533|50185805 hsa-miR-328-5p 1 0 0
chr17:50185533|50185805 hsa-miR-3689a-3p 1 0 0
chr17:50185533|50185805 hsa-miR-4685-5p 1 1 0
chr17:50185533|50185805 hsa-miR-4701-3p 1 0 0
chr17:50185533|50185805 hsa-miR-4745-5p 1 0 0
chr17:50185533|50185805 hsa-miR-4749-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6729-5p 1 0 0
chr17:50185533|50185805 hsa-miR-675-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6777-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6794-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6795-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6846-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6848-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6883-5p 1 1 0
chr17:50185533|50185805 hsa-miR-6887-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6889-5p 1 1 0
chr17:50185533|50185805 hsa-miR-3187-5p 0 1 0
chr17:50185533|50185805 hsa-miR-6885-5p 1 0 0
chr17:50185533|50185805 hsa-miR-939-5p 1 0 0
chr17:50185533|50185805 hsa-miR-4769-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6511b-5p 1 0 0
chr17:50185533|50185805 hsa-miR-3940-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6731-5p 0 1 0
chr17:50185533|50185805 hsa-miR-6856-5p 0 1 0
chr17:50185533|50185805 hsa-miR-1285-3p 0 1 0
chr17:50185533|50185805 hsa-miR-6799-3p 0 1 0
chr17:50185533|50185805 hsa-miR-1914-3p 1 0 0
chr17:50185533|50185805 hsa-miR-6855-5p 1 0 0
chr17:50185533|50185805 hsa-miR-10398-3p 1 1 0
chr17:50185533|50185805 hsa-miR-6785-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6791-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6762-5p 1 0 0
chr17:50185533|50185805 hsa-miR-6801-3p 1 0 0
chr17:50185533|50185805 hsa-miR-9851-3p 0 1 0
chr17:50185533|50185805 hsa-miR-10395-5p 0 1 0
chr17:50185533|50185805 hsa-miR-4676-3p 0 1 0
chr17:50185533|50185805 hsa-miR-10395-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:50185533|50185805
ORF Type ORF1
Protein Length 56
Nucleotide Length 171
Protein Sequence MHGECPESPGRAPPLRPWAFWPGHSALSPSLPRGNAPSRCLRPTPESHRSLGQDSD
Nucleotide Sequence CTGCACGGTGAGTGCCCAGAATCCCCAGGCAGGGCCCCACCTCTCCGGCCTTGGGCTTTTTGGCCAGGCCATAGTGCCCTCTCTCCATCACTCCCACGTGGTAATGCCCCCTCCCGTTGTCTCCGCCCCACCCCAGAGTCACACCGGAGCCTGGGGCAAGACAGTGATTGA
CircID chr17:50185533|50185805
ORF Type ORF2
Protein Length 49
Nucleotide Length 147
Protein Sequence MPPPVVSAPPQSHTGAWGKTVIEYKTTKTSRLPIIDVAPLDVGAPDQEF
Nucleotide Sequence ATGCCCCCTCCCGTTGTCTCCGCCCCACCCCAGAGTCACACCGGAGCCTGGGGCAAGACAGTGATTGAATACAAAACCACCAAGACCTCCCGCCTGCCCATCATCGATGTGGCCCCCTTGGACGTTGGTGCCCCAGACCAGGAATTC
CircID chr17:50185533|50185805
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MNTKPPRPPACPSSMWPPWTLVPQTRNS
Nucleotide Sequence TTGAATACAAAACCACCAAGACCTCCCGCCTGCCCATCATCGATGTGGCCCCCTTGGACGTTGGTGCCCCAGACCAGGAATTCG
CircID chr17:50185533|50185805
ORF Type ORF4
Protein Length 30
Nucleotide Length 93
Protein Sequence MAWPKSPRPERWGPAWGFWALTVQPSTVTL
Nucleotide Sequence ATGGCCTGGCCAAAAAGCCCAAGGCCGGAGAGGTGGGGCCCTGCCTGGGGATTCTGGGCACTCACCGTGCAGCCATCGACAGTGACGCTGTAG
CircID chr17:50185533|50185805
ORF Type ORF5
Protein Length 58
Nucleotide Length 177
Protein Sequence MSCPRLRCDSGVGRRQREGALPRGSDGERALWPGQKAQGRRGGALPGDSGHSPCSHRQ
Nucleotide Sequence CTGTCTTGCCCCAGGCTCCGGTGTGACTCTGGGGTGGGGCGGAGACAACGGGAGGGGGCATTACCACGTGGGAGTGATGGAGAGAGGGCACTATGGCCTGGCCAAAAAGCCCAAGGCCGGAGAGGTGGGGCCCTGCCTGGGGATTCTGGGCACTCACCGTGCAGCCATCGACAGTGA
CircID chr17:50185533|50185805
ORF Type ORF6
Protein Length 88
Nucleotide Length 264
Protein Sequence MVWGTNVQGGHIDDGQAGGLGGFVFNHCLAPGSGVTLGWGGDNGRGHYHVGVMERGHYGLAKKPKAGEVGPCLGILGTHRAAIDSDAV
Nucleotide Sequence CTGGTCTGGGGCACCAACGTCCAAGGGGGCCACATCGATGATGGGCAGGCGGGAGGTCTTGGTGGTTTTGTATTCAATCACTGTCTTGCCCCAGGCTCCGGTGTGACTCTGGGGTGGGGCGGAGACAACGGGAGGGGGCATTACCACGTGGGAGTGATGGAGAGAGGGCACTATGGCCTGGCCAAAAAGCCCAAGGCCGGAGAGGTGGGGCCCTGCCTGGGGATTCTGGGCACTCACCGTGCAGCCATCGACAGTGACGCTGTA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab