CircRNA Information

General Information
circRNA Basic Information
CircID chr17:50186425|50186763
Strand -
CircType exon
Host Gene ENSG00000108821.12;
Algorism CIRI2;
Sequence GCAGGTCTCACCAGTCTCCATGTTGCAGAAGACTTTGATGGCATCCAGGTTGCAGCCTTGGTTGGGGTCAATCCAGTACTCTCCTGTGGTAGGGCAGGGCAAGATGGAGTCAGGGAAAGGGAGCAGCCAGCACCATATGGTAGGGGCACATATGGGCATGGGGACCCTGGCATGGCAGGAGTAGGAGGGAGGGAGAGGCTAGGGCAGGCCCTCACCACTCTTCCAGTCAGAGTGGCACATCTTGAGGTCACGGCAGGTGCGGGCGGGGTTCTTGCGGCTGCCCTCTGGGCTCCGGATGTTCTCGATCTGCTGGCTCAGGCTCTTGAGGGTGGTGTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:50186425|50186763 hsa-miR-204-5p 0 0 1
chr17:50186425|50186763 hsa-miR-204-3p 0 0 1
chr17:50186425|50186763 hsa-miR-211-5p 0 0 1
chr17:50186425|50186763 hsa-miR-211-3p 0 0 1
chr17:50186425|50186763 hsa-miR-335-5p 0 0 1
chr17:50186425|50186763 hsa-miR-335-3p 0 0 1
chr17:50186425|50186763 hsa-miR-345-5p 0 0 1
chr17:50186425|50186763 hsa-miR-345-3p 0 0 1
chr17:50186425|50186763 hsa-miR-520g-5p 0 0 1
chr17:50186425|50186763 hsa-miR-520g-3p 0 0 1
chr17:50186425|50186763 hsa-miR-520h 0 0 1
chr17:50186425|50186763 hsa-miR-604 0 0 1
chr17:50186425|50186763 hsa-miR-619-5p 0 0 1
chr17:50186425|50186763 hsa-miR-619-3p 0 0 1
chr17:50186425|50186763 hsa-miR-647 0 1 1
chr17:50186425|50186763 hsa-miR-1264 0 0 1
chr17:50186425|50186763 hsa-miR-874-5p 0 0 1
chr17:50186425|50186763 hsa-miR-874-3p 0 0 1
chr17:50186425|50186763 hsa-miR-922 0 0 1
chr17:50186425|50186763 hsa-miR-1227-5p 0 0 1
chr17:50186425|50186763 hsa-miR-1227-3p 0 0 1
chr17:50186425|50186763 hsa-miR-1203 1 1 1
chr17:50186425|50186763 hsa-miR-1243 0 0 1
chr17:50186425|50186763 hsa-miR-1278 0 0 1
chr17:50186425|50186763 hsa-miR-769-5p 0 0 1
chr17:50186425|50186763 hsa-miR-146b-3p 0 0 1
chr17:50186425|50186763 hsa-miR-490-3p 0 1 1
chr17:50186425|50186763 hsa-miR-576-3p 0 0 1
chr17:50186425|50186763 hsa-miR-455-5p 0 1 1
chr17:50186425|50186763 hsa-miR-140-3p 0 1 1
chr17:50186425|50186763 hsa-miR-125a-5p 0 0 1
chr17:50186425|50186763 hsa-miR-548b-3p 0 1 1
chr17:50186425|50186763 hsa-miR-220b 0 0 1
chr17:50186425|50186763 hsa-miR-1274a 0 0 1
chr17:50186425|50186763 hsa-miR-125b 0 0 1
chr17:50186425|50186763 hsa-miR-7 0 0 1
chr17:50186425|50186763 hsa-miR-544 0 0 1
chr17:50186425|50186763 hsa-miR-346 1 0 0
chr17:50186425|50186763 hsa-miR-1913 1 0 0
chr17:50186425|50186763 hsa-miR-1976 1 1 0
chr17:50186425|50186763 hsa-miR-3921 1 0 0
chr17:50186425|50186763 hsa-miR-4469 1 0 0
chr17:50186425|50186763 hsa-miR-4512 0 1 0
chr17:50186425|50186763 hsa-miR-4530 0 1 0
chr17:50186425|50186763 hsa-miR-4710 0 1 0
chr17:50186425|50186763 hsa-miR-6077 0 1 0
chr17:50186425|50186763 hsa-miR-18a-3p 0 1 0
chr17:50186425|50186763 hsa-miR-6892-3p 1 1 0
chr17:50186425|50186763 hsa-miR-6807-5p 0 1 0
chr17:50186425|50186763 hsa-miR-6746-5p 1 0 0
chr17:50186425|50186763 hsa-miR-6875-3p 1 0 0
chr17:50186425|50186763 hsa-miR-6762-3p 1 1 0
chr17:50186425|50186763 hsa-miR-6842-3p 1 0 0
chr17:50186425|50186763 hsa-miR-7110-3p 1 1 0
chr17:50186425|50186763 hsa-miR-6817-3p 1 0 0
chr17:50186425|50186763 hsa-miR-1915-5p 1 0 0
chr17:50186425|50186763 hsa-miR-6845-3p 1 0 0
chr17:50186425|50186763 hsa-miR-877-3p 1 1 0
chr17:50186425|50186763 hsa-miR-7855-5p 0 1 0
chr17:50186425|50186763 hsa-miR-6735-3p 1 1 0
chr17:50186425|50186763 hsa-miR-6882-3p 1 0 0
chr17:50186425|50186763 hsa-miR-4713-5p 1 0 0
chr17:50186425|50186763 hsa-miR-7109-3p 1 1 0
chr17:50186425|50186763 hsa-miR-615-5p 0 1 0
chr17:50186425|50186763 hsa-miR-6772-3p 1 0 0
chr17:50186425|50186763 hsa-miR-1226-5p 0 1 0
chr17:50186425|50186763 hsa-miR-4763-5p 1 1 0
chr17:50186425|50186763 hsa-miR-6763-3p 1 0 0
chr17:50186425|50186763 hsa-miR-7108-3p 0 1 0
chr17:50186425|50186763 hsa-miR-2277-3p 1 0 0
chr17:50186425|50186763 hsa-miR-1908-3p 1 1 0
chr17:50186425|50186763 hsa-miR-6894-3p 1 0 0
chr17:50186425|50186763 hsa-miR-7113-3p 1 0 0
chr17:50186425|50186763 hsa-miR-642b-5p 1 0 0
chr17:50186425|50186763 hsa-miR-6878-3p 1 1 0
chr17:50186425|50186763 hsa-miR-7111-3p 1 1 0
chr17:50186425|50186763 hsa-miR-4667-3p 1 1 0
chr17:50186425|50186763 hsa-miR-4446-5p 0 1 0
chr17:50186425|50186763 hsa-miR-378a-5p 1 1 0
chr17:50186425|50186763 hsa-miR-6769a-3p 1 0 0
chr17:50186425|50186763 hsa-miR-4776-3p 0 1 0
chr17:50186425|50186763 hsa-miR-7106-3p 1 1 0
chr17:50186425|50186763 hsa-miR-4732-3p 1 1 0
chr17:50186425|50186763 hsa-miR-873-3p 0 1 0
chr17:50186425|50186763 hsa-miR-4772-3p 0 1 0
chr17:50186425|50186763 hsa-miR-6804-3p 0 1 0
chr17:50186425|50186763 hsa-miR-6867-3p 0 1 0
chr17:50186425|50186763 hsa-miR-6752-3p 0 1 0
chr17:50186425|50186763 hsa-miR-6872-3p 0 1 0
chr17:50186425|50186763 hsa-miR-3605-3p 1 0 0
chr17:50186425|50186763 hsa-miR-130b-5p 1 0 0
chr17:50186425|50186763 hsa-miR-6748-3p 1 1 0
chr17:50186425|50186763 hsa-miR-670-5p 0 1 0
chr17:50186425|50186763 hsa-miR-6734-3p 0 1 0
chr17:50186425|50186763 hsa-miR-3157-3p 0 1 0
chr17:50186425|50186763 hsa-miR-589-5p 0 1 0
chr17:50186425|50186763 hsa-miR-6732-3p 0 1 0
chr17:50186425|50186763 hsa-miR-4685-3p 1 1 0
chr17:50186425|50186763 hsa-miR-4632-5p 0 1 0
chr17:50186425|50186763 hsa-miR-4726-5p 1 0 0
chr17:50186425|50186763 hsa-miR-6735-5p 0 1 0
chr17:50186425|50186763 hsa-miR-3085-5p 0 1 0
chr17:50186425|50186763 hsa-miR-6799-3p 1 0 0
chr17:50186425|50186763 hsa-miR-7843-5p 0 1 0
chr17:50186425|50186763 hsa-miR-6877-3p 1 1 0
chr17:50186425|50186763 hsa-miR-10398-5p 1 0 0
chr17:50186425|50186763 hsa-miR-6756-3p 1 0 0
chr17:50186425|50186763 hsa-miR-6805-3p 1 0 0
chr17:50186425|50186763 hsa-miR-6769b-3p 0 1 0
chr17:50186425|50186763 hsa-miR-6819-3p 1 1 0
chr17:50186425|50186763 hsa-miR-6823-3p 1 1 0
chr17:50186425|50186763 hsa-miR-3085-3p 0 1 0
chr17:50186425|50186763 hsa-miR-6744-3p 1 1 0
chr17:50186425|50186763 hsa-miR-4691-5p 1 0 0
chr17:50186425|50186763 hsa-miR-6817-5p 0 1 0
chr17:50186425|50186763 hsa-miR-5006-3p 1 0 0
chr17:50186425|50186763 hsa-miR-4769-3p 0 1 0
chr17:50186425|50186763 hsa-miR-7162-5p 1 0 0
chr17:50186425|50186763 hsa-miR-6820-3p 1 0 0
chr17:50186425|50186763 hsa-miR-301a-5p 0 1 0
chr17:50186425|50186763 hsa-miR-6839-5p 0 1 0
chr17:50186425|50186763 hsa-miR-302d-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:50186425|50186763
ORF Type ORF1
Protein Length 94
Nucleotide Length 282
Protein Sequence MVGVNPVLSCGRAGQDGVREREQPAPYGRGTYGHGDPGMAGVGGRERLGQALTTLPVRVAHLEVTAGAGGVLAAALWAPDVLDLLAQALEGGVH
Nucleotide Sequence TTGGTTGGGGTCAATCCAGTACTCTCCTGTGGTAGGGCAGGGCAAGATGGAGTCAGGGAAAGGGAGCAGCCAGCACCATATGGTAGGGGCACATATGGGCATGGGGACCCTGGCATGGCAGGAGTAGGAGGGAGGGAGAGGCTAGGGCAGGCCCTCACCACTCTTCCAGTCAGAGTGGCACATCTTGAGGTCACGGCAGGTGCGGGCGGGGTTCTTGCGGCTGCCCTCTGGGCTCCGGATGTTCTCGATCTGCTGGCTCAGGCTCTTGAGGGTGGTGTCCAC
CircID chr17:50186425|50186763
ORF Type ORF2
Protein Length 54
Nucleotide Length 165
Protein Sequence MLQKTLMASRLQPWLGSIQYSPVVGQGKMESGKGSSQHHMVGAHMGMGTLAWQE
Nucleotide Sequence ATGTTGCAGAAGACTTTGATGGCATCCAGGTTGCAGCCTTGGTTGGGGTCAATCCAGTACTCTCCTGTGGTAGGGCAGGGCAAGATGGAGTCAGGGAAAGGGAGCAGCCAGCACCATATGGTAGGGGCACATATGGGCATGGGGACCCTGGCATGGCAGGAGTAG
CircID chr17:50186425|50186763
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MRSRQVRAGFLRLPSGLRMFSICWLRLLRVVS
Nucleotide Sequence TTGAGGTCACGGCAGGTGCGGGCGGGGTTCTTGCGGCTGCCCTCTGGGCTCCGGATGTTCTCGATCTGCTGGCTCAGGCTCTTGAGGGTGGTGTCC
CircID chr17:50186425|50186763
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MSQQIENIRSPEGSRKNPARTCRDLKMCHSDWKSGEGLP
Nucleotide Sequence CTGAGCCAGCAGATCGAGAACATCCGGAGCCCAGAGGGCAGCCGCAAGAACCCCGCCCGCACCTGCCGTGACCTCAAGATGTGCCACTCTGACTGGAAGAGTGGTGAGGGCCTGCCCTAG
CircID chr17:50186425|50186763
ORF Type ORF5
Protein Length 53
Nucleotide Length 159
Protein Sequence MPICAPTIWCWLLPFPDSILPCPTTGEYWIDPNQGCNLDAIKVFCNMETGETC
Nucleotide Sequence ATGCCCATATGTGCCCCTACCATATGGTGCTGGCTGCTCCCTTTCCCTGACTCCATCTTGCCCTGCCCTACCACAGGAGAGTACTGGATTGACCCCAACCAAGGCTGCAACCTGGATGCCATCAAAGTCTTCTGCAACATGGAGACTGGTGAGACCTGC
CircID chr17:50186425|50186763
ORF Type ORF6
Protein Length 76
Nucleotide Length 228
Protein Sequence MTGRVVRACPSLSLPPTPAMPGSPCPYVPLPYGAGCSLSLTPSCPALPQESTGLTPTKAATWMPSKSSATWRLVRP
Nucleotide Sequence CTGACTGGAAGAGTGGTGAGGGCCTGCCCTAGCCTCTCCCTCCCTCCTACTCCTGCCATGCCAGGGTCCCCATGCCCATATGTGCCCCTACCATATGGTGCTGGCTGCTCCCTTTCCCTGACTCCATCTTGCCCTGCCCTACCACAGGAGAGTACTGGATTGACCCCAACCAAGGCTGCAACCTGGATGCCATCAAAGTCTTCTGCAACATGGAGACTGGTGAGACCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab