CircRNA Information

General Information
circRNA Basic Information
CircID chr17:50186883|50187077
Strand +
CircType exon
Host Gene ENSG00000108821.12;
Algorism CIRI2;
Sequence GGTCTCCCTGGCCCCATTGGGCCCCCTGGTCCTCGCGGTCGCACTGGTGATGCTGGTCCTGTTGTATGTAGCCCCTCATCCCCTCTGCTCATGGCCCTCCAGCCCCCAAAGCACTTGGATGCCGGTAATCCCCACTCTCTTCCCTCTCTGTGCAGGGTCCCCCCGGCCCTCCTGGACCTCCTGGTCCCCCTGGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:50186883|50187077 hsa-miR-221-5p 0 0 1
chr17:50186883|50187077 hsa-miR-221-3p 0 0 1
chr17:50186883|50187077 hsa-miR-222-5p 0 0 1
chr17:50186883|50187077 hsa-miR-222-3p 0 0 1
chr17:50186883|50187077 hsa-miR-302a-5p 0 0 1
chr17:50186883|50187077 hsa-miR-302a-3p 0 0 1
chr17:50186883|50187077 hsa-miR-302b-5p 0 0 1
chr17:50186883|50187077 hsa-miR-302b-3p 0 0 1
chr17:50186883|50187077 hsa-miR-302c-5p 0 0 1
chr17:50186883|50187077 hsa-miR-302c-3p 0 0 1
chr17:50186883|50187077 hsa-miR-302d-5p 0 0 1
chr17:50186883|50187077 hsa-miR-302d-3p 0 0 1
chr17:50186883|50187077 hsa-miR-372-5p 0 0 1
chr17:50186883|50187077 hsa-miR-372-3p 0 0 1
chr17:50186883|50187077 hsa-miR-373-5p 0 0 1
chr17:50186883|50187077 hsa-miR-373-3p 0 0 1
chr17:50186883|50187077 hsa-miR-520e-5p 0 0 1
chr17:50186883|50187077 hsa-miR-520e-3p 0 0 1
chr17:50186883|50187077 hsa-miR-520f-5p 0 0 1
chr17:50186883|50187077 hsa-miR-520f-3p 0 0 1
chr17:50186883|50187077 hsa-miR-520b-5p 0 0 1
chr17:50186883|50187077 hsa-miR-520b-3p 0 0 1
chr17:50186883|50187077 hsa-miR-504-5p 0 0 1
chr17:50186883|50187077 hsa-miR-504-3p 0 0 1
chr17:50186883|50187077 hsa-miR-611 1 1 1
chr17:50186883|50187077 hsa-miR-634 0 1 1
chr17:50186883|50187077 hsa-miR-665 0 1 1
chr17:50186883|50187077 hsa-miR-1226-5p 0 0 1
chr17:50186883|50187077 hsa-miR-1226-3p 0 0 1
chr17:50186883|50187077 hsa-miR-1255a 0 0 1
chr17:50186883|50187077 hsa-miR-1275 0 0 1
chr17:50186883|50187077 hsa-miR-302e 0 0 1
chr17:50186883|50187077 hsa-miR-1825 0 0 1
chr17:50186883|50187077 hsa-miR-491-5p 0 1 1
chr17:50186883|50187077 hsa-miR-423-5p 0 1 1
chr17:50186883|50187077 hsa-miR-338-3p 0 1 1
chr17:50186883|50187077 hsa-miR-520d-3p 0 0 1
chr17:50186883|50187077 hsa-miR-520a-3p 0 0 1
chr17:50186883|50187077 hsa-miR-520c-3p 0 0 1
chr17:50186883|50187077 hsa-miR-1255b 0 0 1
chr17:50186883|50187077 hsa-miR-198 1 0 0
chr17:50186883|50187077 hsa-miR-601 0 1 0
chr17:50186883|50187077 hsa-miR-637 1 0 0
chr17:50186883|50187077 hsa-miR-638 1 0 0
chr17:50186883|50187077 hsa-miR-658 1 0 0
chr17:50186883|50187077 hsa-miR-762 1 1 0
chr17:50186883|50187077 hsa-miR-921 1 0 0
chr17:50186883|50187077 hsa-miR-922 1 0 0
chr17:50186883|50187077 hsa-miR-936 1 0 0
chr17:50186883|50187077 hsa-miR-1182 1 0 0
chr17:50186883|50187077 hsa-miR-2110 1 0 0
chr17:50186883|50187077 hsa-miR-3131 0 1 0
chr17:50186883|50187077 hsa-miR-3141 1 0 0
chr17:50186883|50187077 hsa-miR-3154 1 0 0
chr17:50186883|50187077 hsa-miR-4270 1 0 0
chr17:50186883|50187077 hsa-miR-4271 1 0 0
chr17:50186883|50187077 hsa-miR-3621 1 0 0
chr17:50186883|50187077 hsa-miR-3652 1 1 0
chr17:50186883|50187077 hsa-miR-3665 1 0 0
chr17:50186883|50187077 hsa-miR-1268b 1 0 0
chr17:50186883|50187077 hsa-miR-4430 1 1 0
chr17:50186883|50187077 hsa-miR-3135b 0 1 0
chr17:50186883|50187077 hsa-miR-4468 1 1 0
chr17:50186883|50187077 hsa-miR-4489 1 1 0
chr17:50186883|50187077 hsa-miR-4498 1 1 0
chr17:50186883|50187077 hsa-miR-4523 1 0 0
chr17:50186883|50187077 hsa-miR-4525 1 0 0
chr17:50186883|50187077 hsa-miR-3960 1 0 0
chr17:50186883|50187077 hsa-miR-3976 1 0 0
chr17:50186883|50187077 hsa-miR-4644 1 0 0
chr17:50186883|50187077 hsa-miR-4656 1 0 0
chr17:50186883|50187077 hsa-miR-4688 1 0 0
chr17:50186883|50187077 hsa-miR-4689 1 0 0
chr17:50186883|50187077 hsa-miR-4706 1 0 0
chr17:50186883|50187077 hsa-miR-4739 1 1 0
chr17:50186883|50187077 hsa-miR-4741 1 0 0
chr17:50186883|50187077 hsa-miR-5192 1 0 0
chr17:50186883|50187077 hsa-miR-5194 1 0 0
chr17:50186883|50187077 hsa-miR-5572 1 0 0
chr17:50186883|50187077 hsa-miR-5698 1 0 0
chr17:50186883|50187077 hsa-miR-5739 1 0 0
chr17:50186883|50187077 hsa-miR-5787 1 0 0
chr17:50186883|50187077 hsa-miR-6085 1 1 0
chr17:50186883|50187077 hsa-miR-6090 1 0 0
chr17:50186883|50187077 hsa-miR-6127 1 0 0
chr17:50186883|50187077 hsa-miR-6133 1 1 0
chr17:50186883|50187077 hsa-miR-6165 1 0 0
chr17:50186883|50187077 hsa-miR-8052 1 0 0
chr17:50186883|50187077 hsa-miR-8072 1 0 0
chr17:50186883|50187077 hsa-miR-8085 1 0 0
chr17:50186883|50187077 hsa-miR-9500 0 1 0
chr17:50186883|50187077 hsa-miR-12118 1 0 0
chr17:50186883|50187077 hsa-miR-4433b-3p 1 0 0
chr17:50186883|50187077 hsa-miR-92a-2-5p 0 1 0
chr17:50186883|50187077 hsa-miR-128-1-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6734-5p 1 0 0
chr17:50186883|50187077 hsa-miR-4731-5p 1 1 0
chr17:50186883|50187077 hsa-miR-4700-3p 0 1 0
chr17:50186883|50187077 hsa-miR-7106-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6894-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6857-5p 1 0 0
chr17:50186883|50187077 hsa-miR-187-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6799-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6510-5p 1 0 0
chr17:50186883|50187077 hsa-miR-5187-5p 1 1 0
chr17:50186883|50187077 hsa-miR-1227-5p 0 1 0
chr17:50186883|50187077 hsa-miR-6515-5p 0 1 0
chr17:50186883|50187077 hsa-miR-6089 1 0 0
chr17:50186883|50187077 hsa-miR-3192-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6873-5p 1 1 0
chr17:50186883|50187077 hsa-miR-4722-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6741-5p 1 0 0
chr17:50186883|50187077 hsa-miR-3187-3p 1 0 0
chr17:50186883|50187077 hsa-miR-197-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6716-5p 1 0 0
chr17:50186883|50187077 hsa-miR-1292-5p 1 0 0
chr17:50186883|50187077 hsa-miR-4725-5p 0 1 0
chr17:50186883|50187077 hsa-miR-6732-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6798-5p 1 1 0
chr17:50186883|50187077 hsa-miR-486-3p 1 0 0
chr17:50186883|50187077 hsa-miR-6760-5p 1 0 0
chr17:50186883|50187077 hsa-miR-2467-3p 1 1 0
chr17:50186883|50187077 hsa-miR-6782-5p 1 0 0
chr17:50186883|50187077 hsa-miR-345-3p 1 0 0
chr17:50186883|50187077 hsa-miR-615-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6786-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6835-5p 1 0 0
chr17:50186883|50187077 hsa-miR-7109-5p 1 0 0
chr17:50186883|50187077 hsa-miR-4793-5p 1 0 0
chr17:50186883|50187077 hsa-miR-4693-3p 0 1 0
chr17:50186883|50187077 hsa-miR-4640-5p 1 1 0
chr17:50186883|50187077 hsa-miR-6753-5p 0 1 0
chr17:50186883|50187077 hsa-miR-885-3p 1 0 0
chr17:50186883|50187077 hsa-miR-6771-5p 1 0 0
chr17:50186883|50187077 hsa-miR-4713-3p 1 0 0
chr17:50186883|50187077 hsa-miR-4743-5p 1 0 0
chr17:50186883|50187077 hsa-miR-3648 1 0 0
chr17:50186883|50187077 hsa-miR-4787-5p 1 0 0
chr17:50186883|50187077 hsa-miR-149-3p 1 1 0
chr17:50186883|50187077 hsa-miR-6824-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6781-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6877-5p 1 0 0
chr17:50186883|50187077 hsa-miR-194-3p 0 1 0
chr17:50186883|50187077 hsa-miR-4776-5p 1 1 0
chr17:50186883|50187077 hsa-miR-6895-5p 0 1 0
chr17:50186883|50187077 hsa-miR-7113-5p 0 1 0
chr17:50186883|50187077 hsa-miR-6767-5p 1 0 0
chr17:50186883|50187077 hsa-miR-1296-3p 0 1 0
chr17:50186883|50187077 hsa-miR-3620-3p 1 0 0
chr17:50186883|50187077 hsa-miR-3144-5p 0 1 0
chr17:50186883|50187077 hsa-miR-1207-5p 1 0 0
chr17:50186883|50187077 hsa-miR-1233-5p 1 0 0
chr17:50186883|50187077 hsa-miR-4763-3p 1 0 0
chr17:50186883|50187077 hsa-miR-6812-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6816-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6870-5p 1 0 0
chr17:50186883|50187077 hsa-miR-5001-5p 1 1 0
chr17:50186883|50187077 hsa-miR-6726-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6743-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6752-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6754-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6756-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6803-5p 1 1 0
chr17:50186883|50187077 hsa-miR-6813-5p 1 1 0
chr17:50186883|50187077 hsa-miR-7110-5p 1 0 0
chr17:50186883|50187077 hsa-miR-1249-5p 1 1 0
chr17:50186883|50187077 hsa-miR-6722-3p 1 1 0
chr17:50186883|50187077 hsa-miR-6751-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6779-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6780a-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6797-5p 1 1 0
chr17:50186883|50187077 hsa-miR-6808-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6875-5p 1 0 0
chr17:50186883|50187077 hsa-miR-7111-5p 1 0 0
chr17:50186883|50187077 hsa-miR-3620-5p 1 0 0
chr17:50186883|50187077 hsa-miR-4728-5p 1 0 0
chr17:50186883|50187077 hsa-miR-5196-5p 1 0 0
chr17:50186883|50187077 hsa-miR-10526-3p 1 0 0
chr17:50186883|50187077 hsa-miR-1237-5p 1 0 0
chr17:50186883|50187077 hsa-miR-1909-3p 1 0 0
chr17:50186883|50187077 hsa-miR-328-5p 1 1 0
chr17:50186883|50187077 hsa-miR-4649-5p 1 0 0
chr17:50186883|50187077 hsa-miR-4685-5p 1 0 0
chr17:50186883|50187077 hsa-miR-4725-3p 1 0 0
chr17:50186883|50187077 hsa-miR-4726-5p 1 1 0
chr17:50186883|50187077 hsa-miR-4745-5p 1 1 0
chr17:50186883|50187077 hsa-miR-4749-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6735-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6738-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6794-5p 1 1 0
chr17:50186883|50187077 hsa-miR-6795-5p 1 1 0
chr17:50186883|50187077 hsa-miR-6846-5p 1 1 0
chr17:50186883|50187077 hsa-miR-6848-5p 1 1 0
chr17:50186883|50187077 hsa-miR-6883-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6887-5p 1 1 0
chr17:50186883|50187077 hsa-miR-4723-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6845-5p 1 1 0
chr17:50186883|50187077 hsa-miR-6885-5p 1 1 0
chr17:50186883|50187077 hsa-miR-1238-5p 1 0 0
chr17:50186883|50187077 hsa-miR-4758-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6511b-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6758-5p 1 1 0
chr17:50186883|50187077 hsa-miR-6856-5p 1 1 0
chr17:50186883|50187077 hsa-miR-6799-3p 1 0 0
chr17:50186883|50187077 hsa-miR-7843-5p 1 0 0
chr17:50186883|50187077 hsa-miR-1914-3p 1 0 0
chr17:50186883|50187077 hsa-miR-4665-5p 1 0 0
chr17:50186883|50187077 hsa-miR-6891-5p 1 0 0
chr17:50186883|50187077 hsa-miR-4716-3p 0 1 0
chr17:50186883|50187077 hsa-miR-6785-5p 1 0 0
chr17:50186883|50187077 hsa-miR-3184-5p 1 1 0
chr17:50186883|50187077 hsa-miR-6762-5p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:50186883|50187077
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MLMALQPPKHLDAGNPHSLPSLCRVPPALLDLLVPLV
Nucleotide Sequence CTGCTCATGGCCCTCCAGCCCCCAAAGCACTTGGATGCCGGTAATCCCCACTCTCTTCCCTCTCTGTGCAGGGTCCCCCCGGCCCTCCTGGACCTCCTGGTCCCCCTGGTC
CircID chr17:50186883|50187077
ORF Type ORF2
Protein Length 62
Nucleotide Length 186
Protein Sequence MAPLGPLVLAVALVMLVLLYVAPHPLCSWPSSPQSTWMPVIPTLFPLCAGSPRPSWTSWSPW
Nucleotide Sequence CTGGCCCCATTGGGCCCCCTGGTCCTCGCGGTCGCACTGGTGATGCTGGTCCTGTTGTATGTAGCCCCTCATCCCCTCTGCTCATGGCCCTCCAGCCCCCAAAGCACTTGGATGCCGGTAATCCCCACTCTCTTCCCTCTCTGTGCAGGGTCCCCCCGGCCCTCCTGGACCTCCTGGTCCCCCTGG
CircID chr17:50186883|50187077
ORF Type ORF3
Protein Length 51
Nucleotide Length 153
Protein Sequence MHREGREWGLPASKCFGGWRAMSRGDEGLHTTGPASPVRPRGPGGPMGPGR
Nucleotide Sequence CTGCACAGAGAGGGAAGAGAGTGGGGATTACCGGCATCCAAGTGCTTTGGGGGCTGGAGGGCCATGAGCAGAGGGGATGAGGGGCTACATACAACAGGACCAGCATCACCAGTGCGACCGCGAGGACCAGGGGGCCCAATGGGGCCAGGGAGA
CircID chr17:50186883|50187077
ORF Type ORF4
Protein Length 26
Nucleotide Length 78
Protein Sequence MRGYIQQDQHHQCDREDQGAQWGQGD
Nucleotide Sequence ATGAGGGGCTACATACAACAGGACCAGCATCACCAGTGCGACCGCGAGGACCAGGGGGCCCAATGGGGCCAGGGAGAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab